Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 11 | NC_000011.10:g.14297284G>T |
GRCh37.p13 chr 11 fix patch HG256_PATCH | NW_003871075.1:g.355368G>T |
RRAS2 RefSeqGene | NG_017058.1:g.72223C>A |
GRCh37.p13 chr 11 | NC_000011.9:g.14318830G>T |
Molecule type | Change | Amino acid[Codon] | SO Term |
---|---|---|---|
RRAS2 transcript variant 2 | NM_001102669.2:c. | N/A | Intron Variant |
RRAS2 transcript variant 3 | NM_001177314.1:c. | N/A | Intron Variant |
RRAS2 transcript variant 4 | NM_001177315.1:c. | N/A | Intron Variant |
RRAS2 transcript variant 1 | NM_012250.5:c. | N/A | Intron Variant |
RRAS2 transcript variant X1 | XM_017017363.1:c. | N/A | Intron Variant |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | G=0.765 | T=0.235 |
1000Genomes | American | Sub | 694 | G=0.910 | T=0.090 |
1000Genomes | East Asian | Sub | 1008 | G=0.810 | T=0.190 |
1000Genomes | Europe | Sub | 1006 | G=0.875 | T=0.125 |
1000Genomes | Global | Study-wide | 5008 | G=0.842 | T=0.158 |
1000Genomes | South Asian | Sub | 978 | G=0.900 | T=0.100 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.889 | T=0.111 |
The Genome Aggregation Database | African | Sub | 8708 | G=0.805 | T=0.195 |
The Genome Aggregation Database | American | Sub | 836 | G=0.920 | T=0.080 |
The Genome Aggregation Database | East Asian | Sub | 1618 | G=0.813 | T=0.187 |
The Genome Aggregation Database | Europe | Sub | 18470 | G=0.849 | T=0.150 |
The Genome Aggregation Database | Global | Study-wide | 29934 | G=0.836 | T=0.163 |
The Genome Aggregation Database | Other | Sub | 302 | G=0.870 | T=0.130 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.858 | T=0.142 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.889 | T=0.111 |
PMID | Title | Author | Journal |
---|---|---|---|
20201924 | Genome-wide association study of alcohol dependence implicates a region on chromosome 11. | Edenberg HJ | Alcohol Clin Exp Res |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs11023182 | 0.0003 | alcohol dependence | 20201924 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr11 | 326111 | 326237 | E067 | -29131 |
chr11 | 326242 | 327852 | E067 | -27516 |
chr11 | 350483 | 351410 | E067 | -3958 |
chr11 | 357716 | 357804 | E067 | 2348 |
chr11 | 357812 | 357955 | E067 | 2444 |
chr11 | 371159 | 371508 | E067 | 15791 |
chr11 | 373524 | 373653 | E067 | 18156 |
chr11 | 373706 | 373842 | E067 | 18338 |
chr11 | 373933 | 374381 | E067 | 18565 |
chr11 | 374494 | 374544 | E067 | 19126 |
chr11 | 325785 | 325883 | E068 | -29485 |
chr11 | 325989 | 326101 | E068 | -29267 |
chr11 | 326111 | 326237 | E068 | -29131 |
chr11 | 326242 | 327852 | E068 | -27516 |
chr11 | 328032 | 328197 | E068 | -27171 |
chr11 | 328293 | 328580 | E068 | -26788 |
chr11 | 335536 | 337159 | E068 | -18209 |
chr11 | 352587 | 352772 | E068 | -2596 |
chr11 | 352835 | 354238 | E068 | -1130 |
chr11 | 371159 | 371508 | E068 | 15791 |
chr11 | 371557 | 371756 | E068 | 16189 |
chr11 | 371764 | 372056 | E068 | 16396 |
chr11 | 373382 | 373446 | E068 | 18014 |
chr11 | 373524 | 373653 | E068 | 18156 |
chr11 | 373706 | 373842 | E068 | 18338 |
chr11 | 373933 | 374381 | E068 | 18565 |
chr11 | 325785 | 325883 | E069 | -29485 |
chr11 | 325989 | 326101 | E069 | -29267 |
chr11 | 326111 | 326237 | E069 | -29131 |
chr11 | 326242 | 327852 | E069 | -27516 |
chr11 | 334067 | 334975 | E069 | -20393 |
chr11 | 335536 | 337159 | E069 | -18209 |
chr11 | 350483 | 351410 | E069 | -3958 |
chr11 | 352587 | 352772 | E069 | -2596 |
chr11 | 352835 | 354238 | E069 | -1130 |
chr11 | 371159 | 371508 | E069 | 15791 |
chr11 | 371557 | 371756 | E069 | 16189 |
chr11 | 371764 | 372056 | E069 | 16396 |
chr11 | 372084 | 372449 | E069 | 16716 |
chr11 | 372467 | 372517 | E069 | 17099 |
chr11 | 372589 | 372629 | E069 | 17221 |
chr11 | 372705 | 372755 | E069 | 17337 |
chr11 | 372868 | 372918 | E069 | 17500 |
chr11 | 373092 | 373155 | E069 | 17724 |
chr11 | 373382 | 373446 | E069 | 18014 |
chr11 | 373524 | 373653 | E069 | 18156 |
chr11 | 373706 | 373842 | E069 | 18338 |
chr11 | 373933 | 374381 | E069 | 18565 |
chr11 | 375224 | 375389 | E069 | 19856 |
chr11 | 375416 | 375564 | E069 | 20048 |
chr11 | 387566 | 387802 | E070 | 32198 |
chr11 | 387882 | 387974 | E070 | 32514 |
chr11 | 388173 | 388259 | E070 | 32805 |
chr11 | 324235 | 324896 | E071 | -30472 |
chr11 | 324977 | 325190 | E071 | -30178 |
chr11 | 325210 | 325319 | E071 | -30049 |
chr11 | 325321 | 325401 | E071 | -29967 |
chr11 | 325544 | 325588 | E071 | -29780 |
chr11 | 325633 | 325706 | E071 | -29662 |
chr11 | 325785 | 325883 | E071 | -29485 |
chr11 | 325989 | 326101 | E071 | -29267 |
chr11 | 326111 | 326237 | E071 | -29131 |
chr11 | 326242 | 327852 | E071 | -27516 |
chr11 | 328032 | 328197 | E071 | -27171 |
chr11 | 328293 | 328580 | E071 | -26788 |
chr11 | 335148 | 335188 | E071 | -20180 |
chr11 | 335250 | 335303 | E071 | -20065 |
chr11 | 335413 | 335497 | E071 | -19871 |
chr11 | 335536 | 337159 | E071 | -18209 |
chr11 | 337609 | 337659 | E071 | -17709 |
chr11 | 349879 | 350005 | E071 | -5363 |
chr11 | 350175 | 350272 | E071 | -5096 |
chr11 | 350483 | 351410 | E071 | -3958 |
chr11 | 352587 | 352772 | E071 | -2596 |
chr11 | 352835 | 354238 | E071 | -1130 |
chr11 | 371159 | 371508 | E071 | 15791 |
chr11 | 371557 | 371756 | E071 | 16189 |
chr11 | 371764 | 372056 | E071 | 16396 |
chr11 | 372084 | 372449 | E071 | 16716 |
chr11 | 373524 | 373653 | E071 | 18156 |
chr11 | 373706 | 373842 | E071 | 18338 |
chr11 | 321320 | 321364 | E072 | -34004 |
chr11 | 326111 | 326237 | E072 | -29131 |
chr11 | 326242 | 327852 | E072 | -27516 |
chr11 | 335536 | 337159 | E072 | -18209 |
chr11 | 349623 | 349683 | E072 | -5685 |
chr11 | 349879 | 350005 | E072 | -5363 |
chr11 | 350175 | 350272 | E072 | -5096 |
chr11 | 352835 | 354238 | E072 | -1130 |
chr11 | 371159 | 371508 | E072 | 15791 |
chr11 | 371557 | 371756 | E072 | 16189 |
chr11 | 371764 | 372056 | E072 | 16396 |
chr11 | 372084 | 372449 | E072 | 16716 |
chr11 | 373382 | 373446 | E072 | 18014 |
chr11 | 373524 | 373653 | E072 | 18156 |
chr11 | 373706 | 373842 | E072 | 18338 |
chr11 | 375224 | 375389 | E072 | 19856 |
chr11 | 375416 | 375564 | E072 | 20048 |
chr11 | 405211 | 405360 | E072 | 49843 |
chr11 | 306621 | 306699 | E073 | -48669 |
chr11 | 324235 | 324896 | E073 | -30472 |
chr11 | 324977 | 325190 | E073 | -30178 |
chr11 | 326111 | 326237 | E073 | -29131 |
chr11 | 326242 | 327852 | E073 | -27516 |
chr11 | 335536 | 337159 | E073 | -18209 |
chr11 | 342185 | 342386 | E073 | -12982 |
chr11 | 342390 | 342745 | E073 | -12623 |
chr11 | 352444 | 352550 | E073 | -2818 |
chr11 | 352587 | 352772 | E073 | -2596 |
chr11 | 352835 | 354238 | E073 | -1130 |
chr11 | 371557 | 371756 | E073 | 16189 |
chr11 | 371764 | 372056 | E073 | 16396 |
chr11 | 372084 | 372449 | E073 | 16716 |
chr11 | 372467 | 372517 | E073 | 17099 |
chr11 | 372589 | 372629 | E073 | 17221 |
chr11 | 372705 | 372755 | E073 | 17337 |
chr11 | 372868 | 372918 | E073 | 17500 |
chr11 | 373092 | 373155 | E073 | 17724 |
chr11 | 373382 | 373446 | E073 | 18014 |
chr11 | 373524 | 373653 | E073 | 18156 |
chr11 | 373706 | 373842 | E073 | 18338 |
chr11 | 373933 | 374381 | E073 | 18565 |
chr11 | 374494 | 374544 | E073 | 19126 |
chr11 | 375416 | 375564 | E073 | 20048 |
chr11 | 375787 | 376003 | E073 | 20419 |
chr11 | 324235 | 324896 | E074 | -30472 |
chr11 | 324977 | 325190 | E074 | -30178 |
chr11 | 325210 | 325319 | E074 | -30049 |
chr11 | 325321 | 325401 | E074 | -29967 |
chr11 | 325544 | 325588 | E074 | -29780 |
chr11 | 325633 | 325706 | E074 | -29662 |
chr11 | 325785 | 325883 | E074 | -29485 |
chr11 | 325989 | 326101 | E074 | -29267 |
chr11 | 326111 | 326237 | E074 | -29131 |
chr11 | 326242 | 327852 | E074 | -27516 |
chr11 | 335536 | 337159 | E074 | -18209 |
chr11 | 350483 | 351410 | E074 | -3958 |
chr11 | 352444 | 352550 | E074 | -2818 |
chr11 | 352587 | 352772 | E074 | -2596 |
chr11 | 352835 | 354238 | E074 | -1130 |
chr11 | 373706 | 373842 | E074 | 18338 |
chr11 | 373933 | 374381 | E074 | 18565 |
chr11 | 374494 | 374544 | E074 | 19126 |
chr11 | 371159 | 371508 | E081 | 15791 |
chr11 | 371557 | 371756 | E081 | 16189 |
chr11 | 371764 | 372056 | E081 | 16396 |
chr11 | 372084 | 372449 | E081 | 16716 |
chr11 | 372084 | 372449 | E082 | 16716 |
chr11 | 372467 | 372517 | E082 | 17099 |
chr11 | 372589 | 372629 | E082 | 17221 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr11 | 307747 | 308462 | E067 | -46906 |
chr11 | 308510 | 308648 | E067 | -46720 |
chr11 | 308882 | 308946 | E067 | -46422 |
chr11 | 309107 | 309706 | E067 | -45662 |
chr11 | 309723 | 310261 | E067 | -45107 |
chr11 | 314442 | 314663 | E067 | -40705 |
chr11 | 314994 | 315872 | E067 | -39496 |
chr11 | 315976 | 317972 | E067 | -37396 |
chr11 | 319525 | 319915 | E067 | -35453 |
chr11 | 320038 | 320102 | E067 | -35266 |
chr11 | 320332 | 321239 | E067 | -34129 |
chr11 | 368932 | 369004 | E067 | 13564 |
chr11 | 370057 | 370956 | E067 | 14689 |
chr11 | 307747 | 308462 | E068 | -46906 |
chr11 | 308510 | 308648 | E068 | -46720 |
chr11 | 308882 | 308946 | E068 | -46422 |
chr11 | 309107 | 309706 | E068 | -45662 |
chr11 | 309723 | 310261 | E068 | -45107 |
chr11 | 314442 | 314663 | E068 | -40705 |
chr11 | 314994 | 315872 | E068 | -39496 |
chr11 | 315976 | 317972 | E068 | -37396 |
chr11 | 318953 | 319019 | E068 | -36349 |
chr11 | 319198 | 319265 | E068 | -36103 |
chr11 | 319525 | 319915 | E068 | -35453 |
chr11 | 320038 | 320102 | E068 | -35266 |
chr11 | 320332 | 321239 | E068 | -34129 |
chr11 | 368932 | 369004 | E068 | 13564 |
chr11 | 369769 | 370052 | E068 | 14401 |
chr11 | 370057 | 370956 | E068 | 14689 |
chr11 | 307747 | 308462 | E069 | -46906 |
chr11 | 308510 | 308648 | E069 | -46720 |
chr11 | 308882 | 308946 | E069 | -46422 |
chr11 | 309107 | 309706 | E069 | -45662 |
chr11 | 309723 | 310261 | E069 | -45107 |
chr11 | 314442 | 314663 | E069 | -40705 |
chr11 | 314994 | 315872 | E069 | -39496 |
chr11 | 319525 | 319915 | E069 | -35453 |
chr11 | 320038 | 320102 | E069 | -35266 |
chr11 | 320332 | 321239 | E069 | -34129 |
chr11 | 368932 | 369004 | E069 | 13564 |
chr11 | 369769 | 370052 | E069 | 14401 |
chr11 | 370057 | 370956 | E069 | 14689 |
chr11 | 318953 | 319019 | E070 | -36349 |
chr11 | 319198 | 319265 | E070 | -36103 |
chr11 | 319525 | 319915 | E070 | -35453 |
chr11 | 320038 | 320102 | E070 | -35266 |
chr11 | 320332 | 321239 | E070 | -34129 |
chr11 | 368932 | 369004 | E070 | 13564 |
chr11 | 369056 | 369084 | E070 | 13688 |
chr11 | 369098 | 369261 | E070 | 13730 |
chr11 | 369300 | 369768 | E070 | 13932 |
chr11 | 369769 | 370052 | E070 | 14401 |
chr11 | 370057 | 370956 | E070 | 14689 |
chr11 | 307747 | 308462 | E071 | -46906 |
chr11 | 308510 | 308648 | E071 | -46720 |
chr11 | 308882 | 308946 | E071 | -46422 |
chr11 | 309107 | 309706 | E071 | -45662 |
chr11 | 309723 | 310261 | E071 | -45107 |
chr11 | 314442 | 314663 | E071 | -40705 |
chr11 | 314994 | 315872 | E071 | -39496 |
chr11 | 315976 | 317972 | E071 | -37396 |
chr11 | 318953 | 319019 | E071 | -36349 |
chr11 | 319198 | 319265 | E071 | -36103 |
chr11 | 319525 | 319915 | E071 | -35453 |
chr11 | 320038 | 320102 | E071 | -35266 |
chr11 | 320332 | 321239 | E071 | -34129 |
chr11 | 370057 | 370956 | E071 | 14689 |
chr11 | 307747 | 308462 | E072 | -46906 |
chr11 | 308510 | 308648 | E072 | -46720 |
chr11 | 308882 | 308946 | E072 | -46422 |
chr11 | 309107 | 309706 | E072 | -45662 |
chr11 | 309723 | 310261 | E072 | -45107 |
chr11 | 314442 | 314663 | E072 | -40705 |
chr11 | 314994 | 315872 | E072 | -39496 |
chr11 | 315976 | 317972 | E072 | -37396 |
chr11 | 318953 | 319019 | E072 | -36349 |
chr11 | 319198 | 319265 | E072 | -36103 |
chr11 | 319525 | 319915 | E072 | -35453 |
chr11 | 320038 | 320102 | E072 | -35266 |
chr11 | 320332 | 321239 | E072 | -34129 |
chr11 | 368932 | 369004 | E072 | 13564 |
chr11 | 369769 | 370052 | E072 | 14401 |
chr11 | 370057 | 370956 | E072 | 14689 |
chr11 | 307747 | 308462 | E073 | -46906 |
chr11 | 308510 | 308648 | E073 | -46720 |
chr11 | 308882 | 308946 | E073 | -46422 |
chr11 | 309107 | 309706 | E073 | -45662 |
chr11 | 309723 | 310261 | E073 | -45107 |
chr11 | 314442 | 314663 | E073 | -40705 |
chr11 | 314994 | 315872 | E073 | -39496 |
chr11 | 315976 | 317972 | E073 | -37396 |
chr11 | 318953 | 319019 | E073 | -36349 |
chr11 | 319198 | 319265 | E073 | -36103 |
chr11 | 319525 | 319915 | E073 | -35453 |
chr11 | 320038 | 320102 | E073 | -35266 |
chr11 | 320332 | 321239 | E073 | -34129 |
chr11 | 368932 | 369004 | E073 | 13564 |
chr11 | 369769 | 370052 | E073 | 14401 |
chr11 | 370057 | 370956 | E073 | 14689 |
chr11 | 308510 | 308648 | E074 | -46720 |
chr11 | 308882 | 308946 | E074 | -46422 |
chr11 | 309107 | 309706 | E074 | -45662 |
chr11 | 309723 | 310261 | E074 | -45107 |
chr11 | 314994 | 315872 | E074 | -39496 |
chr11 | 318953 | 319019 | E074 | -36349 |
chr11 | 319198 | 319265 | E074 | -36103 |
chr11 | 319525 | 319915 | E074 | -35453 |
chr11 | 320038 | 320102 | E074 | -35266 |
chr11 | 320332 | 321239 | E074 | -34129 |
chr11 | 368932 | 369004 | E074 | 13564 |
chr11 | 370057 | 370956 | E074 | 14689 |
chr11 | 368932 | 369004 | E081 | 13564 |
chr11 | 318953 | 319019 | E082 | -36349 |
chr11 | 319198 | 319265 | E082 | -36103 |
chr11 | 319525 | 319915 | E082 | -35453 |
chr11 | 320038 | 320102 | E082 | -35266 |
chr11 | 320332 | 321239 | E082 | -34129 |
chr11 | 368932 | 369004 | E082 | 13564 |
chr11 | 369056 | 369084 | E082 | 13688 |
chr11 | 369098 | 369261 | E082 | 13730 |
chr11 | 369300 | 369768 | E082 | 13932 |
chr11 | 369769 | 370052 | E082 | 14401 |
chr11 | 370057 | 370956 | E082 | 14689 |