rs11041670

Homo sapiens
T>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0355 (10636/29928,GnomAD)
G=0348 (10146/29118,TOPMED)
G=0339 (1699/5008,1000G)
G=0396 (1527/3854,ALSPAC)
G=0394 (1460/3708,TWINSUK)
chr11:7931373 (GRCh38.p7) (11p15.4)
AD
GWASdb2
1   publication(s)
See rs on genome
2 Enhancers around
2 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 11NC_000011.10:g.7931373T>G
GRCh37.p13 chr 11NC_000011.9:g.7952920T>G
GRCh38.p7 chr 11 novel patch HSCHR11_1_CTG1_2NW_011332695.1:g.162367T>G
GRCh38.p7 chr 11 alt locus HSCHR11_1_CTG5NT_187583.1:g.162874T>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.717G=0.283
1000GenomesAmericanSub694T=0.540G=0.460
1000GenomesEast AsianSub1008T=0.730G=0.270
1000GenomesEuropeSub1006T=0.629G=0.371
1000GenomesGlobalStudy-wide5008T=0.661G=0.339
1000GenomesSouth AsianSub978T=0.630G=0.370
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.604G=0.396
The Genome Aggregation DatabaseAfricanSub8706T=0.695G=0.305
The Genome Aggregation DatabaseAmericanSub838T=0.560G=0.440
The Genome Aggregation DatabaseEast AsianSub1612T=0.708G=0.292
The Genome Aggregation DatabaseEuropeSub18470T=0.617G=0.382
The Genome Aggregation DatabaseGlobalStudy-wide29928T=0.644G=0.355
The Genome Aggregation DatabaseOtherSub302T=0.770G=0.230
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.651G=0.348
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.606G=0.394
PMID Title Author Journal
23953852Genome-wide association studies of maximum number of drinks.Pan YJ Psychiatr Res

P-Value

SNP ID p-value Traits Study
rs110416705.03E-05alcohol consumption23953852

eQTL of rs11041670 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs11041670 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr1179858687986265E07032948
chr1179858687986265E08232948


Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr1179492487949467E074-3453
chr1179494767949625E074-3295