| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 17 | NC_000017.11:g.61507528G>A |
| GRCh37.p13 chr 17 | NC_000017.10:g.59584889G>A |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | G=0.564 | A=0.436 |
| 1000Genomes | American | Sub | 694 | G=0.100 | A=0.900 |
| 1000Genomes | East Asian | Sub | 1008 | G=0.360 | A=0.640 |
| 1000Genomes | Europe | Sub | 1006 | G=0.052 | A=0.948 |
| 1000Genomes | Global | Study-wide | 5008 | G=0.284 | A=0.716 |
| 1000Genomes | South Asian | Sub | 978 | G=0.200 | A=0.800 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.049 | A=0.951 |
| The Genome Aggregation Database | African | Sub | 8688 | G=0.481 | A=0.519 |
| The Genome Aggregation Database | American | Sub | 838 | G=0.080 | A=0.920 |
| The Genome Aggregation Database | East Asian | Sub | 1614 | G=0.350 | A=0.650 |
| The Genome Aggregation Database | Europe | Sub | 18496 | G=0.058 | A=0.941 |
| The Genome Aggregation Database | Global | Study-wide | 29938 | G=0.197 | A=0.802 |
| The Genome Aggregation Database | Other | Sub | 302 | G=0.080 | A=0.920 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.259 | A=0.740 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.044 | A=0.956 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 23953852 | Genome-wide association studies of maximum number of drinks. | Pan Y | J Psychiatr Res |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs11079433 | 3.45E-05 | alcohol consumption | 23953852 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr17 | 59554325 | 59554443 | E081 | -30446 |
| chr17 | 59554508 | 59554843 | E081 | -30046 |
| chr17 | 59560758 | 59561110 | E081 | -23779 |
| chr17 | 59561301 | 59561472 | E081 | -23417 |
| chr17 | 59561509 | 59561559 | E081 | -23330 |
| chr17 | 59561708 | 59561832 | E081 | -23057 |
| chr17 | 59563736 | 59564419 | E081 | -20470 |
| chr17 | 59563555 | 59563704 | E082 | -21185 |