SNP Detail Info-rs11193198

Molecule type	Change	Amino acid[Codon]	SO Term
SORCS1 transcript variant 2	NM_001013031.2:c.	N/A	Intron Variant
SORCS1 transcript variant 3	NM_001206569.1:c.	N/A	Intron Variant
SORCS1 transcript variant 4	NM_001206570.1:c.	N/A	Intron Variant
SORCS1 transcript variant 5	NM_001206571.1:c.	N/A	Intron Variant
SORCS1 transcript variant 6	NM_001206572.1:c.	N/A	Intron Variant
SORCS1 transcript variant 1	NM_052918.4:c.	N/A	Intron Variant
SORCS1 transcript variant X2	XM_011539199.2:c.	N/A	Intron Variant
SORCS1 transcript variant X4	XM_011539201.2:c.	N/A	Intron Variant
SORCS1 transcript variant X1	XM_017015614.1:c.	N/A	Intron Variant
SORCS1 transcript variant X3	XM_017015615.1:c.	N/A	Intron Variant
SORCS1 transcript variant X6	XM_017015617.1:c.	N/A	Intron Variant
SORCS1 transcript variant X5	XM_017015616.1:c.	N/A	Genic Upstream Transcript Variant
SORCS1 transcript variant X7	XM_017015618.1:c.	N/A	Genic Upstream Transcript Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	G=0.817	A=0.183
1000Genomes	American	Sub	694	G=0.760	A=0.240
1000Genomes	East Asian	Sub	1008	G=0.879	A=0.121
1000Genomes	Europe	Sub	1006	G=0.660	A=0.340
1000Genomes	Global	Study-wide	5008	G=0.793	A=0.207
1000Genomes	South Asian	Sub	978	G=0.830	A=0.170
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.691	A=0.309
The Genome Aggregation Database	African	Sub	8706	G=0.815	A=0.185
The Genome Aggregation Database	American	Sub	838	G=0.770	A=0.230
The Genome Aggregation Database	East Asian	Sub	1606	G=0.879	A=0.121
The Genome Aggregation Database	Europe	Sub	18480	G=0.677	A=0.322
The Genome Aggregation Database	Global	Study-wide	29930	G=0.729	A=0.270
The Genome Aggregation Database	Other	Sub	300	G=0.570	A=0.430
Trans-Omics for Precision Medicine	Global	Study-wide	29118	G=0.740	A=0.259
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.680	A=0.320

PMID	Title	Author	Journal
21314694	Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.	Kendler KS	Alcohol Clin Exp Res

SNP ID	p-value	Traits	Study
rs11193198	0.000754	alcohol dependence	21314694

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr10	108819082	108819209	E067	-42758
chr10	108819261	108819447	E067	-42520
chr10	108819546	108819590	E067	-42377
chr10	108827664	108827807	E068	-34160
chr10	108827881	108827943	E068	-34024
chr10	108827989	108828053	E068	-33914
chr10	108828196	108828256	E068	-33711
chr10	108831194	108831303	E068	-30664
chr10	108831417	108831504	E068	-30463
chr10	108831861	108831966	E068	-30001
chr10	108831995	108832203	E068	-29764
chr10	108832549	108832602	E068	-29365
chr10	108832647	108832838	E068	-29129
chr10	108901418	108901614	E068	39451
chr10	108901758	108901850	E068	39791
chr10	108831861	108831966	E069	-30001
chr10	108831995	108832203	E069	-29764
chr10	108831194	108831303	E070	-30664
chr10	108831417	108831504	E070	-30463
chr10	108831861	108831966	E070	-30001
chr10	108831995	108832203	E070	-29764
chr10	108832549	108832602	E070	-29365
chr10	108832647	108832838	E070	-29129
chr10	108862926	108864034	E070	959
chr10	108819813	108819982	E071	-41985
chr10	108832549	108832602	E071	-29365
chr10	108832647	108832838	E071	-29129
chr10	108831861	108831966	E072	-30001
chr10	108831995	108832203	E072	-29764
chr10	108832549	108832602	E072	-29365
chr10	108832647	108832838	E072	-29129
chr10	108827881	108827943	E074	-34024
chr10	108827989	108828053	E074	-33914
chr10	108831861	108831966	E074	-30001
chr10	108831995	108832203	E074	-29764
chr10	108832549	108832602	E074	-29365
chr10	108832647	108832838	E074	-29129
chr10	108862926	108864034	E082	959

rs11193198