| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 21 | NC_000021.9:g.25442104G>A |
| GRCh37.p13 chr 21 | NC_000021.8:g.26814416G>A |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | G=0.136 | A=0.864 |
| 1000Genomes | American | Sub | 694 | G=0.030 | A=0.970 |
| 1000Genomes | East Asian | Sub | 1008 | G=0.413 | A=0.587 |
| 1000Genomes | Europe | Sub | 1006 | G=0.083 | A=0.917 |
| 1000Genomes | Global | Study-wide | 5008 | G=0.174 | A=0.826 |
| 1000Genomes | South Asian | Sub | 978 | G=0.170 | A=0.830 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.079 | A=0.921 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.089 | A=0.910 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.078 | A=0.922 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 22377092 | ANAPC1 and SLCO3A1 are associated with nicotine dependence: meta-analysis of genome-wide association studies. | Wang KS | Drug Alcohol Depend |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs1120839 | 3.79E-05 | nicotine dependence (smoking) | 22377092 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.