SNP Detail Info-rs11575302

Molecule type	Change	Amino acid[Codon]	SO Term
DDC transcript variant 3	NM_001242886.1:c.	N/A	Intron Variant
DDC transcript variant 5	NM_001242888.1:c.	N/A	Intron Variant
DDC transcript variant 1	NM_001082971.1:c....NM_001082971.1:c.234C>T	A [GCC]> A [GCT]	Coding Sequence Variant
aromatic-L-amino-acid decarboxylase isoform 1	NP_001076440.1:p....NP_001076440.1:p.Ala78=	A [Ala]> A [Ala]	Synonymous Variant
DDC transcript variant 2	NM_000790.3:c.234C>T	A [GCC]> A [GCT]	Coding Sequence Variant
aromatic-L-amino-acid decarboxylase isoform 1	NP_000781.1:p.Ala78=	A [Ala]> A [Ala]	Synonymous Variant
DDC transcript variant 4	NM_001242887.1:c....NM_001242887.1:c.234C>T	A [GCC]> A [GCT]	Coding Sequence Variant
aromatic-L-amino-acid decarboxylase isoform 3	NP_001229816.1:p....NP_001229816.1:p.Ala78=	A [Ala]> A [Ala]	Synonymous Variant
DDC transcript variant 6	NM_001242889.1:c....NM_001242889.1:c.234C>T	A [GCC]> A [GCT]	Coding Sequence Variant
aromatic-L-amino-acid decarboxylase isoform 5	NP_001229818.1:p....NP_001229818.1:p.Ala78=	A [Ala]> A [Ala]	Synonymous Variant
DDC transcript variant 7	NM_001242890.1:c....NM_001242890.1:c.234C>T	A [GCC]> A [GCT]	Coding Sequence Variant
aromatic-L-amino-acid decarboxylase isoform 6	NP_001229819.1:p....NP_001229819.1:p.Ala78=	A [Ala]> A [Ala]	Synonymous Variant
DDC transcript variant X2	XM_005271745.4:c.	N/A	Intron Variant
DDC transcript variant X1	XM_011515161.2:c.	N/A	Genic Upstream Transcript Variant

Molecule type	Change	Amino acid[Codon]	SO Term
DDC-AS1 transcript	NR_033845.1:n.344G>A	G>A	Non Coding Transcript Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	G=0.859	A=0.141
1000Genomes	American	Sub	694	G=0.990	A=0.010
1000Genomes	East Asian	Sub	1008	G=0.999	A=0.001
1000Genomes	Europe	Sub	1006	G=0.983	A=0.017
1000Genomes	Global	Study-wide	5008	G=0.955	A=0.045
1000Genomes	South Asian	Sub	978	G=0.990	A=0.010
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.984	A=0.016
The Exome Aggregation Consortium	American	Sub	21052	G=0.928	A=0.071
The Exome Aggregation Consortium	Asian	Sub	24106	G=0.990	A=0.009
The Exome Aggregation Consortium	Europe	Sub	69762	G=0.982	A=0.017
The Exome Aggregation Consortium	Global	Study-wide	115756	G=0.974	A=0.025
The Exome Aggregation Consortium	Other	Sub	836	G=0.980	A=0.020
The Genome Aggregation Database	African	Sub	8726	G=0.863	A=0.137
The Genome Aggregation Database	American	Sub	838	G=0.980	A=0.020
The Genome Aggregation Database	East Asian	Sub	1622	G=1.000	A=0.000
The Genome Aggregation Database	Europe	Sub	18488	G=0.985	A=0.014
The Genome Aggregation Database	Global	Study-wide	29976	G=0.950	A=0.049
The Genome Aggregation Database	Other	Sub	302	G=1.000	A=0.000
Trans-Omics for Precision Medicine	Global	Study-wide	29118	G=0.927	A=0.072
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.988	A=0.012

PMID	Title	Author	Journal
21881118	Genetic variants and susceptibility to neurological complications following West Nile virus infection.	Loeb M	J Infect Dis
23953852	Genome-wide association studies of maximum number of drinks.	Pan Y	J Psychiatr Res
27884205	Whole genome sequence analysis of serum amino acid levels.	Yu B	Genome Biol
20732625	Meta-analysis of genome-wide association studies of attention-deficit/hyperactivity disorder.	Neale BM	J Am Acad Child Adolesc Psychiatry

SNP ID	p-value	Traits	Study
rs11575302	2.87E-05	alcohol consumption	23953852

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr7	50598960	50599691	E067	-8003
chr7	50599710	50599919	E067	-7775
chr7	50599948	50600033	E067	-7661
chr7	50600073	50600144	E067	-7550
chr7	50602342	50602965	E068	-4729
chr7	50599710	50599919	E069	-7775
chr7	50599948	50600033	E069	-7661
chr7	50600073	50600144	E069	-7550
chr7	50652602	50653144	E069	44908
chr7	50595823	50595915	E070	-11779
chr7	50595987	50596159	E070	-11535
chr7	50598960	50599691	E070	-8003
chr7	50600073	50600144	E070	-7550
chr7	50623847	50624736	E070	16153
chr7	50624833	50625171	E070	17139
chr7	50625206	50625424	E070	17512
chr7	50625457	50625501	E070	17763
chr7	50628526	50629016	E070	20832
chr7	50628526	50629016	E071	20832
chr7	50628315	50628425	E074	20621
chr7	50628526	50629016	E074	20832
chr7	50598960	50599691	E081	-8003
chr7	50599710	50599919	E081	-7775
chr7	50599948	50600033	E081	-7661
chr7	50628526	50629016	E082	20832

rs11575302