rs11596226

Homo sapiens
T>G
ZRANB1 : 3 Prime UTR Variant
Check p-value
SNV (Single Nucleotide Variation)
G=0078 (2361/29978,GnomAD)
G=0055 (1602/29118,TOPMED)
G=0042 (209/5008,1000G)
G=0097 (372/3854,ALSPAC)
G=0101 (374/3708,TWINSUK)
chr10:124986796 (GRCh38.p7) (10q26.13)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 10NC_000010.11:g.124986796T>G
GRCh37.p13 chr 10NC_000010.10:g.126675365T>G

Gene: ZRANB1, zinc finger RANBP2-type containing 1(plus strand)

Molecule type Change Amino acid[Codon] SO Term
ZRANB1 transcriptNM_017580.2:c.N/A3 Prime UTR Variant
ZRANB1 transcript variant X1XM_005269925.4:c.N/A3 Prime UTR Variant
ZRANB1 transcript variant X2XM_005269926.4:c.N/A3 Prime UTR Variant
ZRANB1 transcript variant X3XM_017016357.1:c.N/A3 Prime UTR Variant
ZRANB1 transcript variant X1XM_006717907.2:c.N/A3 Prime UTR Variant
ZRANB1 transcript variant X6XM_017016358.1:c.N/A3 Prime UTR Variant
ZRANB1 transcript variant X7XM_011539887.2:c.N/AGenic Downstream Transcript Variant
ZRANB1 transcript variant X4XR_001747114.1:n.N/AGenic Downstream Transcript Variant

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.996G=0.004
1000GenomesAmericanSub694T=0.870G=0.130
1000GenomesEast AsianSub1008T=0.999G=0.001
1000GenomesEuropeSub1006T=0.907G=0.093
1000GenomesGlobalStudy-wide5008T=0.958G=0.042
1000GenomesSouth AsianSub978T=0.980G=0.020
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.903G=0.097
The Genome Aggregation DatabaseAfricanSub8732T=0.982G=0.018
The Genome Aggregation DatabaseAmericanSub836T=0.860G=0.140
The Genome Aggregation DatabaseEast AsianSub1620T=1.000G=0.000
The Genome Aggregation DatabaseEuropeSub18488T=0.888G=0.111
The Genome Aggregation DatabaseGlobalStudy-wide29978T=0.921G=0.078
The Genome Aggregation DatabaseOtherSub302T=0.920G=0.080
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.945G=0.055
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.899G=0.101
PMID Title Author Journal
21314694Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.Kendler KSAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs115962268.19E-05alcohol dependence21314694

eQTL of rs11596226 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs11596226 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr10126630876126631788E067-43577
chr10126631825126631922E067-43443
chr10126631932126632742E067-42623
chr10126633073126633156E067-42209
chr10126633339126633547E067-41818
chr10126633652126633869E067-41496
chr10126634073126634127E067-41238
chr10126634145126634281E067-41084
chr10126634440126634681E067-40684
chr10126635616126635684E067-39681
chr10126635691126635768E067-39597
chr10126635797126635923E067-39442
chr10126635996126636046E067-39319
chr10126636118126636176E067-39189
chr10126636228126636298E067-39067
chr10126636463126636538E067-38827
chr10126636561126636617E067-38748
chr10126643925126644214E067-31151
chr10126644266126644563E067-30802
chr10126644573126644760E067-30605
chr10126653596126653637E067-21728
chr10126653725126653787E067-21578
chr10126657241126657291E067-18074
chr10126657312126657352E067-18013
chr10126657474126657579E067-17786
chr10126657619126657682E067-17683
chr10126657941126658047E067-17318
chr10126659322126659375E067-15990
chr10126659422126659762E067-15603
chr10126659833126660298E067-15067
chr10126660504126660564E067-14801
chr10126666330126666469E067-8896
chr10126666509126666582E067-8783
chr10126666719126666894E067-8471
chr10126666995126667130E067-8235
chr10126667670126667710E067-7655
chr10126671882126672288E067-3077
chr10126672294126672428E067-2937
chr10126680803126681362E0675438
chr10126681366126681604E0676001
chr10126681683126681933E0676318
chr10126681939126682051E0676574
chr10126682104126682187E0676739
chr10126682202126682264E0676837
chr10126682309126682391E0676944
chr10126682434126682493E0677069
chr10126682528126682607E0677163
chr10126682667126682916E0677302
chr10126683285126683351E0677920
chr10126683583126684012E0678218
chr10126684069126684123E0678704
chr10126688033126688781E06712668
chr10126688820126690221E06713455
chr10126690230126691330E06714865
chr10126691489126691688E06716124
chr10126691958126692049E06716593
chr10126692175126692351E06716810
chr10126692373126692433E06717008
chr10126692439126692728E06717074
chr10126692864126692949E06717499
chr10126693092126693150E06717727
chr10126693235126693420E06717870
chr10126693487126693564E06718122
chr10126693751126693829E06718386
chr10126693985126694112E06718620
chr10126694157126694222E06718792
chr10126694329126694409E06718964
chr10126694516126694715E06719151
chr10126694737126694837E06719372
chr10126694948126695176E06719583
chr10126695238126695373E06719873
chr10126695417126696506E06720052
chr10126696831126697472E06721466
chr10126697751126698783E06722386
chr10126698836126698939E06723471
chr10126698955126699373E06723590
chr10126703051126705935E06727686
chr10126706264126706371E06730899
chr10126706402126706610E06731037
chr10126706664126706816E06731299
chr10126707220126707390E06731855
chr10126707436126707527E06732071
chr10126707606126707739E06732241
chr10126707778126707954E06732413
chr10126708070126708306E06732705
chr10126708466126708528E06733101
chr10126708692126708746E06733327
chr10126709028126709298E06733663
chr10126709307126709478E06733942
chr10126710634126710834E06735269
chr10126710905126711130E06735540
chr10126711171126711290E06735806
chr10126711439126711556E06736074
chr10126711569126711687E06736204
chr10126711729126713643E06736364
chr10126713726126713784E06738361
chr10126713898126714541E06738533
chr10126716452126716876E06741087
chr10126716898126716953E06741533
chr10126716968126717455E06741603
chr10126723372126724386E06748007
chr10126724598126724777E06749233
chr10126724871126724965E06749506
chr10126725118126725168E06749753
chr10126630563126630603E068-44762
chr10126630622126630672E068-44693
chr10126630876126631788E068-43577
chr10126631932126632742E068-42623
chr10126633073126633156E068-42209
chr10126633339126633547E068-41818
chr10126633652126633869E068-41496
chr10126634073126634127E068-41238
chr10126634145126634281E068-41084
chr10126635257126635307E068-40058
chr10126635616126635684E068-39681
chr10126635691126635768E068-39597
chr10126635797126635923E068-39442
chr10126635996126636046E068-39319
chr10126636118126636176E068-39189
chr10126642150126642266E068-33099
chr10126642326126642366E068-32999
chr10126642578126642712E068-32653
chr10126643834126643884E068-31481
chr10126643925126644214E068-31151
chr10126644266126644563E068-30802
chr10126644573126644760E068-30605
chr10126645411126645541E068-29824
chr10126658871126658965E068-16400
chr10126659072126659177E068-16188
chr10126659322126659375E068-15990
chr10126659422126659762E068-15603
chr10126659833126660298E068-15067
chr10126660504126660564E068-14801
chr10126660713126660786E068-14579
chr10126666330126666469E068-8896
chr10126666509126666582E068-8783
chr10126666719126666894E068-8471
chr10126666995126667130E068-8235
chr10126671718126671861E068-3504
chr10126671882126672288E068-3077
chr10126672294126672428E068-2937
chr10126680803126681362E0685438
chr10126681366126681604E0686001
chr10126681683126681933E0686318
chr10126681939126682051E0686574
chr10126682104126682187E0686739
chr10126682202126682264E0686837
chr10126682309126682391E0686944
chr10126682434126682493E0687069
chr10126682528126682607E0687163
chr10126682667126682916E0687302
chr10126682928126682982E0687563
chr10126683583126684012E0688218
chr10126684069126684123E0688704
chr10126684204126684391E0688839
chr10126687454126687514E06812089
chr10126687571126687668E06812206
chr10126687689126687835E06812324
chr10126688033126688781E06812668
chr10126688820126690221E06813455
chr10126690230126691330E06814865
chr10126692439126692728E06817074
chr10126692864126692949E06817499
chr10126693092126693150E06817727
chr10126693235126693420E06817870
chr10126693487126693564E06818122
chr10126693751126693829E06818386
chr10126693985126694112E06818620
chr10126694114126694154E06818749
chr10126694157126694222E06818792
chr10126694329126694409E06818964
chr10126694516126694715E06819151
chr10126694737126694837E06819372
chr10126694948126695176E06819583
chr10126695238126695373E06819873
chr10126695417126696506E06820052
chr10126697751126698783E06822386
chr10126698836126698939E06823471
chr10126698955126699373E06823590
chr10126703051126705935E06827686
chr10126706264126706371E06830899
chr10126706402126706610E06831037
chr10126706664126706816E06831299
chr10126707220126707390E06831855
chr10126707436126707527E06832071
chr10126707606126707739E06832241
chr10126707778126707954E06832413
chr10126708070126708306E06832705
chr10126710634126710834E06835269
chr10126710905126711130E06835540
chr10126711171126711290E06835806
chr10126711439126711556E06836074
chr10126711569126711687E06836204
chr10126711729126713643E06836364
chr10126718719126718799E06843354
chr10126718843126718920E06843478
chr10126724598126724777E06849233
chr10126724871126724965E06849506
chr10126725118126725168E06849753
chr10126630876126631788E069-43577
chr10126631932126632742E069-42623
chr10126633073126633156E069-42209
chr10126633339126633547E069-41818
chr10126633652126633869E069-41496
chr10126634073126634127E069-41238
chr10126634145126634281E069-41084
chr10126635616126635684E069-39681
chr10126635691126635768E069-39597
chr10126635797126635923E069-39442
chr10126635996126636046E069-39319
chr10126636118126636176E069-39189
chr10126636228126636298E069-39067
chr10126642150126642266E069-33099
chr10126643834126643884E069-31481
chr10126643925126644214E069-31151
chr10126644266126644563E069-30802
chr10126647616126647737E069-27628
chr10126647753126647805E069-27560
chr10126652516126653133E069-22232
chr10126653596126653637E069-21728
chr10126653725126653787E069-21578
chr10126657474126657579E069-17786
chr10126657619126657682E069-17683
chr10126659072126659177E069-16188
chr10126659322126659375E069-15990
chr10126659422126659762E069-15603
chr10126659833126660298E069-15067
chr10126660504126660564E069-14801
chr10126660713126660786E069-14579
chr10126666330126666469E069-8896
chr10126666509126666582E069-8783
chr10126666719126666894E069-8471
chr10126666995126667130E069-8235
chr10126671882126672288E069-3077
chr10126672294126672428E069-2937
chr10126680803126681362E0695438
chr10126681366126681604E0696001
chr10126681683126681933E0696318
chr10126681939126682051E0696574
chr10126682104126682187E0696739
chr10126682202126682264E0696837
chr10126682309126682391E0696944
chr10126682434126682493E0697069
chr10126682528126682607E0697163
chr10126682667126682916E0697302
chr10126682928126682982E0697563
chr10126683100126683200E0697735
chr10126683285126683351E0697920
chr10126683583126684012E0698218
chr10126684069126684123E0698704
chr10126684204126684391E0698839
chr10126684403126684605E0699038
chr10126687454126687514E06912089
chr10126687571126687668E06912206
chr10126687689126687835E06912324
chr10126688033126688781E06912668
chr10126688820126690221E06913455
chr10126690230126691330E06914865
chr10126691489126691688E06916124
chr10126691958126692049E06916593
chr10126692175126692351E06916810
chr10126692373126692433E06917008
chr10126692439126692728E06917074
chr10126692864126692949E06917499
chr10126693092126693150E06917727
chr10126694737126694837E06919372
chr10126694948126695176E06919583
chr10126695238126695373E06919873
chr10126695417126696506E06920052
chr10126696831126697472E06921466
chr10126697539126697739E06922174
chr10126697751126698783E06922386
chr10126698836126698939E06923471
chr10126698955126699373E06923590
chr10126702580126702735E06927215
chr10126702755126702904E06927390
chr10126703051126705935E06927686
chr10126706264126706371E06930899
chr10126706402126706610E06931037
chr10126706664126706816E06931299
chr10126707220126707390E06931855
chr10126707436126707527E06932071
chr10126707606126707739E06932241
chr10126707778126707954E06932413
chr10126708070126708306E06932705
chr10126708466126708528E06933101
chr10126708692126708746E06933327
chr10126709028126709298E06933663
chr10126709731126709864E06934366
chr10126710634126710834E06935269
chr10126710905126711130E06935540
chr10126711171126711290E06935806
chr10126711439126711556E06936074
chr10126711569126711687E06936204
chr10126713726126713784E06938361
chr10126716452126716876E06941087
chr10126716898126716953E06941533
chr10126716968126717455E06941603
chr10126723372126724386E06948007
chr10126724598126724777E06949233
chr10126724871126724965E06949506
chr10126725118126725168E06949753
chr10126683583126684012E0708218
chr10126684069126684123E0708704
chr10126687454126687514E07012089
chr10126687571126687668E07012206
chr10126687689126687835E07012324
chr10126688033126688781E07012668
chr10126688820126690221E07013455
chr10126690230126691330E07014865
chr10126693235126693420E07017870
chr10126693487126693564E07018122
chr10126693751126693829E07018386
chr10126693985126694112E07018620
chr10126694114126694154E07018749
chr10126694157126694222E07018792
chr10126694329126694409E07018964
chr10126694516126694715E07019151
chr10126694737126694837E07019372
chr10126694948126695176E07019583
chr10126695238126695373E07019873
chr10126695417126696506E07020052
chr10126697751126698783E07022386
chr10126706264126706371E07030899
chr10126706402126706610E07031037
chr10126710041126710380E07034676
chr10126710412126710555E07035047
chr10126710634126710834E07035269
chr10126710905126711130E07035540
chr10126711171126711290E07035806
chr10126711439126711556E07036074
chr10126711569126711687E07036204
chr10126713726126713784E07038361
chr10126713898126714541E07038533
chr10126716452126716876E07041087
chr10126716898126716953E07041533
chr10126716968126717455E07041603
chr10126717522126717616E07042157
chr10126717804126717884E07042439
chr10126718118126718646E07042753
chr10126718719126718799E07043354
chr10126718843126718920E07043478
chr10126719124126719249E07043759
chr10126719276126719366E07043911
chr10126719390126719685E07044025
chr10126719806126719856E07044441
chr10126720090126720169E07044725
chr10126720251126720431E07044886
chr10126720436126720480E07045071
chr10126720938126721003E07045573
chr10126721095126721201E07045730
chr10126721245126721305E07045880
chr10126721680126721752E07046315
chr10126721851126722048E07046486
chr10126723179126723315E07047814
chr10126723372126724386E07048007
chr10126724598126724777E07049233
chr10126724871126724965E07049506
chr10126725118126725168E07049753
chr10126630876126631788E071-43577
chr10126631825126631922E071-43443
chr10126631932126632742E071-42623
chr10126633652126633869E071-41496
chr10126634073126634127E071-41238
chr10126634145126634281E071-41084
chr10126643834126643884E071-31481
chr10126643925126644214E071-31151
chr10126644266126644563E071-30802
chr10126644573126644760E071-30605
chr10126652516126653133E071-22232
chr10126653596126653637E071-21728
chr10126653725126653787E071-21578
chr10126657241126657291E071-18074
chr10126657312126657352E071-18013
chr10126657474126657579E071-17786
chr10126657619126657682E071-17683
chr10126659072126659177E071-16188
chr10126659322126659375E071-15990
chr10126659422126659762E071-15603
chr10126659833126660298E071-15067
chr10126660504126660564E071-14801
chr10126664645126665023E071-10342
chr10126665249126665311E071-10054
chr10126665966126666063E071-9302
chr10126666101126666235E071-9130
chr10126666330126666469E071-8896
chr10126666509126666582E071-8783
chr10126666719126666894E071-8471
chr10126666995126667130E071-8235
chr10126680529126680741E0715164
chr10126680803126681362E0715438
chr10126681366126681604E0716001
chr10126681683126681933E0716318
chr10126681939126682051E0716574
chr10126682104126682187E0716739
chr10126682202126682264E0716837
chr10126682309126682391E0716944
chr10126682434126682493E0717069
chr10126682528126682607E0717163
chr10126682667126682916E0717302
chr10126682928126682982E0717563
chr10126683100126683200E0717735
chr10126683285126683351E0717920
chr10126683583126684012E0718218
chr10126684069126684123E0718704
chr10126686293126686444E07110928
chr10126686565126686745E07111200
chr10126686782126687334E07111417
chr10126687454126687514E07112089
chr10126687571126687668E07112206
chr10126687689126687835E07112324
chr10126688033126688781E07112668
chr10126688820126690221E07113455
chr10126690230126691330E07114865
chr10126691489126691688E07116124
chr10126692373126692433E07117008
chr10126692439126692728E07117074
chr10126692864126692949E07117499
chr10126693092126693150E07117727
chr10126694516126694715E07119151
chr10126694737126694837E07119372
chr10126694948126695176E07119583
chr10126695238126695373E07119873
chr10126695417126696506E07120052
chr10126696831126697472E07121466
chr10126697539126697739E07122174
chr10126697751126698783E07122386
chr10126698836126698939E07123471
chr10126698955126699373E07123590
chr10126703051126705935E07127686
chr10126706264126706371E07130899
chr10126706402126706610E07131037
chr10126706664126706816E07131299
chr10126707220126707390E07131855
chr10126707436126707527E07132071
chr10126707606126707739E07132241
chr10126707778126707954E07132413
chr10126708070126708306E07132705
chr10126708466126708528E07133101
chr10126708692126708746E07133327
chr10126709028126709298E07133663
chr10126709307126709478E07133942
chr10126709498126709591E07134133
chr10126709731126709864E07134366
chr10126710041126710380E07134676
chr10126710412126710555E07135047
chr10126710634126710834E07135269
chr10126710905126711130E07135540
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