rs11670215

Homo sapiens
T>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0225 (6739/29936,GnomAD)
G=0179 (5230/29118,TOPMED)
G=0299 (1499/5008,1000G)
G=0232 (895/3854,ALSPAC)
G=0220 (814/3708,TWINSUK)
chr19:51684315 (GRCh38.p7) (19q13.41)
AD
GWASdb2
1   publication(s)
See rs on genome
73 Enhancers around
34 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 19NC_000019.10:g.51684315T>G
GRCh37.p13 chr 19NC_000019.9:g.52187568T>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.912G=0.088
1000GenomesAmericanSub694T=0.750G=0.250
1000GenomesEast AsianSub1008T=0.344G=0.656
1000GenomesEuropeSub1006T=0.755G=0.245
1000GenomesGlobalStudy-wide5008T=0.701G=0.299
1000GenomesSouth AsianSub978T=0.690G=0.310
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.768G=0.232
The Genome Aggregation DatabaseAfricanSub8722T=0.891G=0.109
The Genome Aggregation DatabaseAmericanSub836T=0.730G=0.270
The Genome Aggregation DatabaseEast AsianSub1612T=0.346G=0.654
The Genome Aggregation DatabaseEuropeSub18464T=0.759G=0.240
The Genome Aggregation DatabaseGlobalStudy-wide29936T=0.774G=0.225
The Genome Aggregation DatabaseOtherSub302T=0.800G=0.200
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.820G=0.179
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.780G=0.220
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs116702150.000561alcohol dependence20201924

eQTL of rs11670215 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs11670215 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr195216692852167017E067-20551
chr195219058952190639E0673021
chr195220861152208919E06721043
chr195219594152195992E0688373
chr195220861152208919E06821043
chr195219058952190639E0693021
chr195219594152195992E0698373
chr195219620052196287E0698632
chr195219655052196853E0698982
chr195220861152208919E06921043
chr195222722852227424E06939660
chr195222834652228479E06940778
chr195222923152229752E06941663
chr195222984852229949E06942280
chr195218447952185127E070-2441
chr195218992652189976E0702358
chr195219020852190287E0702640
chr195219030552190414E0702737
chr195219045952190506E0702891
chr195219058952190639E0703021
chr195219620052196287E0708632
chr195219655052196853E0708982
chr195216003552160788E071-26780
chr195219620052196287E0718632
chr195219655052196853E0718982
chr195220861152208919E07121043
chr195222680352227021E07139235
chr195222702452227139E07139456
chr195222722852227424E07139660
chr195222834652228479E07140778
chr195222923152229752E07141663
chr195223034752230973E07142779
chr195219620052196287E0728632
chr195219655052196853E0728982
chr195220861152208919E07221043
chr195222680352227021E07239235
chr195222702452227139E07239456
chr195222722852227424E07239660
chr195222834652228479E07240778
chr195222923152229752E07241663
chr195222984852229949E07242280
chr195223034752230973E07242779
chr195218952952189719E0731961
chr195219620052196287E0738632
chr195219655052196853E0738982
chr195216003552160788E074-26780
chr195219058952190639E0743021
chr195219594152195992E0748373
chr195219620052196287E0748632
chr195220861152208919E07421043
chr195222680352227021E07439235
chr195222702452227139E07439456
chr195222722852227424E07439660
chr195222834652228479E07440778
chr195222923152229752E07441663
chr195222984852229949E07442280
chr195223034752230973E07442779
chr195219020852190287E0812640
chr195219030552190414E0812737
chr195219045952190506E0812891
chr195219058952190639E0813021
chr195219594152195992E0818373
chr195219620052196287E0818632
chr195219655052196853E0818982
chr195219705652197138E0819488
chr195219716052197307E0819592
chr195219733252197434E0819764
chr195219745452197508E0819886
chr195219751052197613E0819942
chr195219832252198463E08210754
chr195222680352227021E08239235
chr195222702452227139E08239456
chr195222722852227424E08239660










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr195219087052195864E0673302
chr195222250552223240E06734937
chr195222326152223469E06735693
chr195219087052195864E0683302
chr195220530952208571E06817741
chr195222250552223240E06834937
chr195222326152223469E06835693
chr195222350452223564E06835936
chr195219087052195864E0693302
chr195220530952208571E06917741
chr195222250552223240E06934937
chr195222326152223469E06935693
chr195219087052195864E0703302
chr195220530952208571E07017741
chr195219087052195864E0713302
chr195220530952208571E07117741
chr195222326152223469E07135693
chr195219087052195864E0723302
chr195220530952208571E07217741
chr195222250552223240E07234937
chr195222326152223469E07235693
chr195222350452223564E07235936
chr195219087052195864E0733302
chr195222250552223240E07334937
chr195222326152223469E07335693
chr195219087052195864E0743302
chr195220530952208571E07417741
chr195222250552223240E07434937
chr195222326152223469E07435693
chr195219087052195864E0813302
chr195219087052195864E0823302
chr195220530952208571E08217741
chr195222250552223240E08234937
chr195222326152223469E08235693