rs11675636

Homo sapiens
A>T
None
Check p-value
SNV (Single Nucleotide Variation)
A==0241 (7219/29936,GnomAD)
A==0243 (7076/29118,TOPMED)
A==0323 (1620/5008,1000G)
A==0179 (688/3854,ALSPAC)
A==0200 (740/3708,TWINSUK)
chr2:136280972 (GRCh38.p7) (2q22.1)
AD
GWASCatalog
1   publication(s)
See rs on genome
31 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 2NC_000002.12:g.136280972A>T
GRCh37.p13 chr 2NC_000002.11:g.137038542A>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.194T=0.806
1000GenomesAmericanSub694A=0.380T=0.620
1000GenomesEast AsianSub1008A=0.498T=0.502
1000GenomesEuropeSub1006A=0.258T=0.742
1000GenomesGlobalStudy-wide5008A=0.323T=0.677
1000GenomesSouth AsianSub978A=0.340T=0.660
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.179T=0.821
The Genome Aggregation DatabaseAfricanSub8724A=0.213T=0.787
The Genome Aggregation DatabaseAmericanSub834A=0.400T=0.600
The Genome Aggregation DatabaseEast AsianSub1606A=0.549T=0.451
The Genome Aggregation DatabaseEuropeSub18472A=0.218T=0.781
The Genome Aggregation DatabaseGlobalStudy-wide29936A=0.241T=0.758
The Genome Aggregation DatabaseOtherSub300A=0.370T=0.630
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.243T=0.757
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.200T=0.800
PMID Title Author Journal
24166409Genome-wide association study of alcohol dependence:significant findings in African- and European-Americans including novel risk loci.Gelernter JMol Psychiatry

P-Value

SNP ID p-value Traits Study
rs116756362E-06alcohol dependence24166409

eQTL of rs11675636 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs11675636 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr2136995499136997317E069-41225
chr2137001646137002009E069-36533
chr2137009363137009427E069-29115
chr2137009448137009938E069-28604
chr2137001646137002009E070-36533
chr2137005109137005491E070-33051
chr2137005862137006220E070-32322
chr2137035376137035455E070-3087
chr2137036721137036862E070-1680
chr2137038596137039731E07054
chr2137055660137055740E07017118
chr2137057144137057418E07018602
chr2137057817137057965E07019275
chr2137058409137058528E07019867
chr2137059165137059235E07020623
chr2137009233137009311E072-29231
chr2137009363137009427E072-29115
chr2137009448137009938E072-28604
chr2137009448137009938E073-28604
chr2137003523137004240E074-34302
chr2137008328137008511E074-30031
chr2137008559137008715E074-29827
chr2137008757137008891E074-29651
chr2137008906137008996E074-29546
chr2137009078137009141E074-29401
chr2137009233137009311E074-29231
chr2137009363137009427E074-29115
chr2137009448137009938E074-28604
chr2137010047137010134E074-28408
chr2137058409137058528E08119867
chr2137003523137004240E082-34302