SNP Detail Info-rs11712735

Sequence Name	Change(s)
GRCh38.p7 chr 3	NC_000003.12:g.21732777T>A
GRCh37.p13 chr 3	NC_000003.11:g.21774269T>A

Molecule type	Change	Amino acid[Codon]	SO Term
ZNF385D transcript	NM_024697.2:c.	N/A	Intron Variant
ZNF385D transcript variant X12	XM_011534122.1:c.	N/A	Intron Variant
ZNF385D transcript variant X13	XM_011534123.2:c.	N/A	Intron Variant
ZNF385D transcript variant X14	XM_011534124.2:c.	N/A	Intron Variant
ZNF385D transcript variant X1	XM_017007191.1:c.	N/A	Intron Variant
ZNF385D transcript variant X2	XM_017007192.1:c.	N/A	Intron Variant
ZNF385D transcript variant X3	XM_017007193.1:c.	N/A	Intron Variant
ZNF385D transcript variant X4	XM_017007194.1:c.	N/A	Intron Variant
ZNF385D transcript variant X5	XM_017007195.1:c.	N/A	Intron Variant
ZNF385D transcript variant X6	XM_017007196.1:c.	N/A	Intron Variant
ZNF385D transcript variant X7	XM_017007197.1:c.	N/A	Intron Variant
ZNF385D transcript variant X8	XM_017007198.1:c.	N/A	Intron Variant
ZNF385D transcript variant X9	XM_017007199.1:c.	N/A	Intron Variant
ZNF385D transcript variant X16	XM_017007203.1:c.	N/A	Intron Variant
ZNF385D transcript variant X10	XM_017007200.1:c.	N/A	Genic Upstream Transcript Variant
ZNF385D transcript variant X11	XM_017007201.1:c.	N/A	Genic Upstream Transcript Variant
ZNF385D transcript variant X15	XM_017007202.1:c.	N/A	Genic Upstream Transcript Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	T=0.734	A=0.266
1000Genomes	American	Sub	694	T=0.900	A=0.100
1000Genomes	East Asian	Sub	1008	T=0.850	A=0.150
1000Genomes	Europe	Sub	1006	T=0.809	A=0.191
1000Genomes	Global	Study-wide	5008	T=0.780	A=0.220
1000Genomes	South Asian	Sub	978	T=0.650	A=0.350
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.797	A=0.203
The Genome Aggregation Database	African	Sub	8716	T=0.741	A=0.259
The Genome Aggregation Database	American	Sub	838	T=0.910	A=0.090
The Genome Aggregation Database	East Asian	Sub	1618	T=0.856	A=0.144
The Genome Aggregation Database	Europe	Sub	18486	T=0.812	A=0.187
The Genome Aggregation Database	Global	Study-wide	29960	T=0.797	A=0.202
The Genome Aggregation Database	Other	Sub	302	T=0.830	A=0.170
Trans-Omics for Precision Medicine	Global	Study-wide	29118	T=0.773	A=0.226
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.818	A=0.182

PMID	Title	Author	Journal
19268276	Genome-wide association study of smoking initiation and current smoking.	Vink JM	Am J Hum Genet

SNP ID	p-value	Traits	Study
rs11712735	0.000226	nicotine smoking	19268276

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr3	21747203	21747591	E067	-26678
chr3	21747088	21747149	E069	-27120
chr3	21747203	21747591	E069	-26678
chr3	21760626	21760694	E070	-13575
chr3	21760802	21760928	E070	-13341
chr3	21788892	21789248	E070	14623
chr3	21789666	21789828	E070	15397
chr3	21747203	21747591	E071	-26678
chr3	21747203	21747591	E073	-26678
chr3	21788892	21789248	E073	14623
chr3	21786898	21786972	E081	12629
chr3	21788892	21789248	E081	14623
chr3	21793205	21793776	E081	18936

Chromosome	Start	End	Region	Distance(-/+:Up/Downstream)
chr3	21790115	21790228	E067	15846
chr3	21790581	21790878	E067	16312
chr3	21791063	21791166	E067	16794
chr3	21791407	21793179	E067	17138
chr3	21790581	21790878	E068	16312
chr3	21791063	21791166	E068	16794
chr3	21791407	21793179	E068	17138
chr3	21790115	21790228	E069	15846
chr3	21790581	21790878	E069	16312
chr3	21791063	21791166	E069	16794
chr3	21791407	21793179	E069	17138
chr3	21790581	21790878	E070	16312
chr3	21791063	21791166	E070	16794
chr3	21791407	21793179	E070	17138
chr3	21790115	21790228	E072	15846
chr3	21790581	21790878	E072	16312
chr3	21791063	21791166	E072	16794
chr3	21791407	21793179	E072	17138
chr3	21790115	21790228	E073	15846
chr3	21790581	21790878	E073	16312
chr3	21791063	21791166	E073	16794
chr3	21791407	21793179	E073	17138
chr3	21791407	21793179	E074	17138
chr3	21790115	21790228	E081	15846
chr3	21790581	21790878	E081	16312
chr3	21791063	21791166	E081	16794
chr3	21791407	21793179	E081	17138
chr3	21790115	21790228	E082	15846
chr3	21790581	21790878	E082	16312
chr3	21791063	21791166	E082	16794
chr3	21791407	21793179	E082	17138

rs11712735