rs11847777

Homo sapiens
G>C
None
Check p-value
SNV (Single Nucleotide Variation)
C=0213 (6391/29902,GnomAD)
C=0195 (5696/29118,TOPMED)
C=0178 (892/5008,1000G)
C=0215 (829/3854,ALSPAC)
C=0206 (762/3708,TWINSUK)
chr14:96687006 (GRCh38.p7) (14q32.2)
ND
GWASdb2
1   publication(s)
See rs on genome
76 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 14NC_000014.9:g.96687006G>C
GRCh37.p13 chr 14NC_000014.8:g.97153343G>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.800C=0.200
1000GenomesAmericanSub694G=0.830C=0.170
1000GenomesEast AsianSub1008G=0.840C=0.160
1000GenomesEuropeSub1006G=0.801C=0.199
1000GenomesGlobalStudy-wide5008G=0.822C=0.178
1000GenomesSouth AsianSub978G=0.850C=0.150
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.785C=0.215
The Genome Aggregation DatabaseAfricanSub8698G=0.783C=0.217
The Genome Aggregation DatabaseAmericanSub836G=0.810C=0.190
The Genome Aggregation DatabaseEast AsianSub1616G=0.843C=0.157
The Genome Aggregation DatabaseEuropeSub18450G=0.782C=0.217
The Genome Aggregation DatabaseGlobalStudy-wide29902G=0.786C=0.213
The Genome Aggregation DatabaseOtherSub302G=0.740C=0.260
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.804C=0.195
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.794C=0.206
PMID Title Author Journal
17158188Novel genes identified in a high-density genome wide association study for nicotine dependence.Bierut LJHum Mol Genet

P-Value

SNP ID p-value Traits Study
rs118477770.000919nicotine dependence17158188

eQTL of rs11847777 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs11847777 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr149715547697155804E0682133
chr149715599397156043E0682650
chr149713003697130112E069-23231
chr149712642597126786E070-26557
chr149712703197127861E070-25482
chr149712798797128077E070-25266
chr149712829997128374E070-24969
chr149713003697130112E070-23231
chr149713018797130237E070-23106
chr149713440297134698E070-18645
chr149713507597135167E070-18176
chr149714336097143462E070-9881
chr149714365597143705E070-9638
chr149714414197144218E070-9125
chr149714551897145643E070-7700
chr149714585397145923E070-7420
chr149714595897146000E070-7343
chr149715492797155198E0701584
chr149716424697164310E07010903
chr149716506397165221E07011720
chr149718483197184930E07031488
chr149719554897195602E07042205
chr149719576397196060E07042420
chr149719634697196709E07043003
chr149719676097196823E07043417
chr149719969297199746E07046349
chr149720066997200841E07047326
chr149720084297200902E07047499
chr149720116597201283E07047822
chr149720143897201499E07048095
chr149720159897201676E07048255
chr149712842497129303E081-24040
chr149712943897129709E081-23634
chr149713003697130112E081-23231
chr149713018797130237E081-23106
chr149717593397176140E08122590
chr149717654097176590E08123197
chr149717666297176712E08123319
chr149717678597177035E08123442
chr149717725297177292E08123909
chr149717794797178252E08124604
chr149717834097178390E08124997
chr149717839397178443E08125050
chr149717847897178538E08125135
chr149717862597178665E08125282
chr149717870397178753E08125360
chr149717915997179209E08125816
chr149717933397179401E08125990
chr149717976397180269E08126420
chr149719554897195602E08142205
chr149719576397196060E08142420
chr149719634697196709E08143003
chr149719676097196823E08143417
chr149719714797197197E08143804
chr149720116597201283E08147822
chr149720143897201499E08148095
chr149720159897201676E08148255
chr149712798797128077E082-25266
chr149712829997128374E082-24969
chr149712933997129389E082-23954
chr149712943897129709E082-23634
chr149715492797155198E0821584
chr149715723497157284E0823891
chr149717582697175919E08222483
chr149717593397176140E08222590
chr149717654097176590E08223197
chr149717666297176712E08223319
chr149717678597177035E08223442
chr149717725297177292E08223909
chr149717915997179209E08225816
chr149717933397179401E08225990
chr149717976397180269E08226420
chr149719634697196709E08243003
chr149719676097196823E08243417
chr149720143897201499E08248095
chr149720159897201676E08248255