Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 16 | NC_000016.10:g.66344849A>G |
GRCh37.p13 chr 16 | NC_000016.9:g.66378752A>G |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | A=0.682 | G=0.318 |
1000Genomes | American | Sub | 694 | A=0.960 | G=0.040 |
1000Genomes | East Asian | Sub | 1008 | A=1.000 | G=0.000 |
1000Genomes | Europe | Sub | 1006 | A=0.977 | G=0.023 |
1000Genomes | Global | Study-wide | 5008 | A=0.898 | G=0.102 |
1000Genomes | South Asian | Sub | 978 | A=0.970 | G=0.030 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.985 | G=0.015 |
The Genome Aggregation Database | African | Sub | 8708 | A=0.734 | G=0.266 |
The Genome Aggregation Database | American | Sub | 838 | A=0.960 | G=0.040 |
The Genome Aggregation Database | East Asian | Sub | 1622 | A=1.000 | G=0.000 |
The Genome Aggregation Database | Europe | Sub | 18500 | A=0.984 | G=0.015 |
The Genome Aggregation Database | Global | Study-wide | 29970 | A=0.911 | G=0.088 |
The Genome Aggregation Database | Other | Sub | 302 | A=0.970 | G=0.030 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.870 | G=0.130 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.982 | G=0.018 |
PMID | Title | Author | Journal |
---|---|---|---|
21314694 | Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample. | Kendler KS | Alcohol Clin Exp Res |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs11863931 | 0.000464 | alcohol dependence | 21314694 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr16 | 66359153 | 66359352 | E067 | -19400 |
chr16 | 66359389 | 66359429 | E067 | -19323 |
chr16 | 66359451 | 66359608 | E067 | -19144 |
chr16 | 66359643 | 66359848 | E067 | -18904 |
chr16 | 66359904 | 66359958 | E067 | -18794 |
chr16 | 66360205 | 66360255 | E067 | -18497 |
chr16 | 66360284 | 66360376 | E067 | -18376 |
chr16 | 66360463 | 66360585 | E067 | -18167 |
chr16 | 66360646 | 66361402 | E067 | -17350 |
chr16 | 66361438 | 66361521 | E067 | -17231 |
chr16 | 66361530 | 66361580 | E067 | -17172 |
chr16 | 66361741 | 66361948 | E067 | -16804 |
chr16 | 66361963 | 66362019 | E067 | -16733 |
chr16 | 66362037 | 66362087 | E067 | -16665 |
chr16 | 66362088 | 66362168 | E067 | -16584 |
chr16 | 66362321 | 66362417 | E067 | -16335 |
chr16 | 66366607 | 66366941 | E067 | -11811 |
chr16 | 66366958 | 66367605 | E067 | -11147 |
chr16 | 66367657 | 66367782 | E067 | -10970 |
chr16 | 66368081 | 66368147 | E067 | -10605 |
chr16 | 66368900 | 66369017 | E067 | -9735 |
chr16 | 66369093 | 66369425 | E067 | -9327 |
chr16 | 66369444 | 66370207 | E067 | -8545 |
chr16 | 66337882 | 66337934 | E068 | -40818 |
chr16 | 66338056 | 66338691 | E068 | -40061 |
chr16 | 66359153 | 66359352 | E068 | -19400 |
chr16 | 66359389 | 66359429 | E068 | -19323 |
chr16 | 66359451 | 66359608 | E068 | -19144 |
chr16 | 66359643 | 66359848 | E068 | -18904 |
chr16 | 66359904 | 66359958 | E068 | -18794 |
chr16 | 66360205 | 66360255 | E068 | -18497 |
chr16 | 66360284 | 66360376 | E068 | -18376 |
chr16 | 66360463 | 66360585 | E068 | -18167 |
chr16 | 66360646 | 66361402 | E068 | -17350 |
chr16 | 66361438 | 66361521 | E068 | -17231 |
chr16 | 66361530 | 66361580 | E068 | -17172 |
chr16 | 66361741 | 66361948 | E068 | -16804 |
chr16 | 66361963 | 66362019 | E068 | -16733 |
chr16 | 66362037 | 66362087 | E068 | -16665 |
chr16 | 66362088 | 66362168 | E068 | -16584 |
chr16 | 66362321 | 66362417 | E068 | -16335 |
chr16 | 66366607 | 66366941 | E068 | -11811 |
chr16 | 66366958 | 66367605 | E068 | -11147 |
chr16 | 66367657 | 66367782 | E068 | -10970 |
chr16 | 66368900 | 66369017 | E068 | -9735 |
chr16 | 66369093 | 66369425 | E068 | -9327 |
chr16 | 66369444 | 66370207 | E068 | -8545 |
chr16 | 66370267 | 66370632 | E068 | -8120 |
chr16 | 66393326 | 66393402 | E068 | 14574 |
chr16 | 66393403 | 66394204 | E068 | 14651 |
chr16 | 66403268 | 66403406 | E068 | 24516 |
chr16 | 66359153 | 66359352 | E069 | -19400 |
chr16 | 66359389 | 66359429 | E069 | -19323 |
chr16 | 66359451 | 66359608 | E069 | -19144 |
chr16 | 66359643 | 66359848 | E069 | -18904 |
chr16 | 66359904 | 66359958 | E069 | -18794 |
chr16 | 66360205 | 66360255 | E069 | -18497 |
chr16 | 66360284 | 66360376 | E069 | -18376 |
chr16 | 66360463 | 66360585 | E069 | -18167 |
chr16 | 66360646 | 66361402 | E069 | -17350 |
chr16 | 66361438 | 66361521 | E069 | -17231 |
chr16 | 66361530 | 66361580 | E069 | -17172 |
chr16 | 66361741 | 66361948 | E069 | -16804 |
chr16 | 66361963 | 66362019 | E069 | -16733 |
chr16 | 66362037 | 66362087 | E069 | -16665 |
chr16 | 66362088 | 66362168 | E069 | -16584 |
chr16 | 66362321 | 66362417 | E069 | -16335 |
chr16 | 66366607 | 66366941 | E069 | -11811 |
chr16 | 66366958 | 66367605 | E069 | -11147 |
chr16 | 66367657 | 66367782 | E069 | -10970 |
chr16 | 66368081 | 66368147 | E069 | -10605 |
chr16 | 66368900 | 66369017 | E069 | -9735 |
chr16 | 66369093 | 66369425 | E069 | -9327 |
chr16 | 66369444 | 66370207 | E069 | -8545 |
chr16 | 66354216 | 66354261 | E070 | -24491 |
chr16 | 66354401 | 66354441 | E070 | -24311 |
chr16 | 66354599 | 66354653 | E070 | -24099 |
chr16 | 66358556 | 66359114 | E070 | -19638 |
chr16 | 66359153 | 66359352 | E070 | -19400 |
chr16 | 66359389 | 66359429 | E070 | -19323 |
chr16 | 66359451 | 66359608 | E070 | -19144 |
chr16 | 66359643 | 66359848 | E070 | -18904 |
chr16 | 66359904 | 66359958 | E070 | -18794 |
chr16 | 66360205 | 66360255 | E070 | -18497 |
chr16 | 66360284 | 66360376 | E070 | -18376 |
chr16 | 66360463 | 66360585 | E070 | -18167 |
chr16 | 66360646 | 66361402 | E070 | -17350 |
chr16 | 66361438 | 66361521 | E070 | -17231 |
chr16 | 66361530 | 66361580 | E070 | -17172 |
chr16 | 66361741 | 66361948 | E070 | -16804 |
chr16 | 66361963 | 66362019 | E070 | -16733 |
chr16 | 66362037 | 66362087 | E070 | -16665 |
chr16 | 66362088 | 66362168 | E070 | -16584 |
chr16 | 66362321 | 66362417 | E070 | -16335 |
chr16 | 66366607 | 66366941 | E070 | -11811 |
chr16 | 66366958 | 66367605 | E070 | -11147 |
chr16 | 66367657 | 66367782 | E070 | -10970 |
chr16 | 66368081 | 66368147 | E070 | -10605 |
chr16 | 66369093 | 66369425 | E070 | -9327 |
chr16 | 66369444 | 66370207 | E070 | -8545 |
chr16 | 66370267 | 66370632 | E070 | -8120 |
chr16 | 66338056 | 66338691 | E071 | -40061 |
chr16 | 66358556 | 66359114 | E071 | -19638 |
chr16 | 66359153 | 66359352 | E071 | -19400 |
chr16 | 66359389 | 66359429 | E071 | -19323 |
chr16 | 66359451 | 66359608 | E071 | -19144 |
chr16 | 66359643 | 66359848 | E071 | -18904 |
chr16 | 66359904 | 66359958 | E071 | -18794 |
chr16 | 66360205 | 66360255 | E071 | -18497 |
chr16 | 66360284 | 66360376 | E071 | -18376 |
chr16 | 66360463 | 66360585 | E071 | -18167 |
chr16 | 66360646 | 66361402 | E071 | -17350 |
chr16 | 66361438 | 66361521 | E071 | -17231 |
chr16 | 66361530 | 66361580 | E071 | -17172 |
chr16 | 66361741 | 66361948 | E071 | -16804 |
chr16 | 66361963 | 66362019 | E071 | -16733 |
chr16 | 66362037 | 66362087 | E071 | -16665 |
chr16 | 66362088 | 66362168 | E071 | -16584 |
chr16 | 66362321 | 66362417 | E071 | -16335 |
chr16 | 66362609 | 66362659 | E071 | -16093 |
chr16 | 66366499 | 66366549 | E071 | -12203 |
chr16 | 66366607 | 66366941 | E071 | -11811 |
chr16 | 66366958 | 66367605 | E071 | -11147 |
chr16 | 66367657 | 66367782 | E071 | -10970 |
chr16 | 66368081 | 66368147 | E071 | -10605 |
chr16 | 66368900 | 66369017 | E071 | -9735 |
chr16 | 66369093 | 66369425 | E071 | -9327 |
chr16 | 66369444 | 66370207 | E071 | -8545 |
chr16 | 66377756 | 66377876 | E071 | -876 |
chr16 | 66378037 | 66378182 | E071 | -570 |
chr16 | 66378198 | 66378976 | E071 | 0 |
chr16 | 66396282 | 66396380 | E071 | 17530 |
chr16 | 66397288 | 66399409 | E071 | 18536 |
chr16 | 66399437 | 66399998 | E071 | 20685 |
chr16 | 66400100 | 66400257 | E071 | 21348 |
chr16 | 66358556 | 66359114 | E072 | -19638 |
chr16 | 66359153 | 66359352 | E072 | -19400 |
chr16 | 66359389 | 66359429 | E072 | -19323 |
chr16 | 66359451 | 66359608 | E072 | -19144 |
chr16 | 66359643 | 66359848 | E072 | -18904 |
chr16 | 66359904 | 66359958 | E072 | -18794 |
chr16 | 66360205 | 66360255 | E072 | -18497 |
chr16 | 66360284 | 66360376 | E072 | -18376 |
chr16 | 66360463 | 66360585 | E072 | -18167 |
chr16 | 66360646 | 66361402 | E072 | -17350 |
chr16 | 66361438 | 66361521 | E072 | -17231 |
chr16 | 66361530 | 66361580 | E072 | -17172 |
chr16 | 66361741 | 66361948 | E072 | -16804 |
chr16 | 66361963 | 66362019 | E072 | -16733 |
chr16 | 66362037 | 66362087 | E072 | -16665 |
chr16 | 66362088 | 66362168 | E072 | -16584 |
chr16 | 66362321 | 66362417 | E072 | -16335 |
chr16 | 66362609 | 66362659 | E072 | -16093 |
chr16 | 66366607 | 66366941 | E072 | -11811 |
chr16 | 66366958 | 66367605 | E072 | -11147 |
chr16 | 66367657 | 66367782 | E072 | -10970 |
chr16 | 66368081 | 66368147 | E072 | -10605 |
chr16 | 66370267 | 66370632 | E072 | -8120 |
chr16 | 66376186 | 66376236 | E072 | -2516 |
chr16 | 66376320 | 66376556 | E072 | -2196 |
chr16 | 66378198 | 66378976 | E072 | 0 |
chr16 | 66358556 | 66359114 | E073 | -19638 |
chr16 | 66359153 | 66359352 | E073 | -19400 |
chr16 | 66359389 | 66359429 | E073 | -19323 |
chr16 | 66359451 | 66359608 | E073 | -19144 |
chr16 | 66359643 | 66359848 | E073 | -18904 |
chr16 | 66359904 | 66359958 | E073 | -18794 |
chr16 | 66360646 | 66361402 | E073 | -17350 |
chr16 | 66361438 | 66361521 | E073 | -17231 |
chr16 | 66361530 | 66361580 | E073 | -17172 |
chr16 | 66361741 | 66361948 | E073 | -16804 |
chr16 | 66361963 | 66362019 | E073 | -16733 |
chr16 | 66362037 | 66362087 | E073 | -16665 |
chr16 | 66362088 | 66362168 | E073 | -16584 |
chr16 | 66362321 | 66362417 | E073 | -16335 |
chr16 | 66369093 | 66369425 | E073 | -9327 |
chr16 | 66369444 | 66370207 | E073 | -8545 |
chr16 | 66397288 | 66399409 | E073 | 18536 |
chr16 | 66399437 | 66399998 | E073 | 20685 |
chr16 | 66402917 | 66403264 | E073 | 24165 |
chr16 | 66417381 | 66417658 | E073 | 38629 |
chr16 | 66348933 | 66349622 | E074 | -29130 |
chr16 | 66349753 | 66349807 | E074 | -28945 |
chr16 | 66358556 | 66359114 | E074 | -19638 |
chr16 | 66359153 | 66359352 | E074 | -19400 |
chr16 | 66359389 | 66359429 | E074 | -19323 |
chr16 | 66359451 | 66359608 | E074 | -19144 |
chr16 | 66359643 | 66359848 | E074 | -18904 |
chr16 | 66359904 | 66359958 | E074 | -18794 |
chr16 | 66360205 | 66360255 | E074 | -18497 |
chr16 | 66360284 | 66360376 | E074 | -18376 |
chr16 | 66360463 | 66360585 | E074 | -18167 |
chr16 | 66360646 | 66361402 | E074 | -17350 |
chr16 | 66361438 | 66361521 | E074 | -17231 |
chr16 | 66361530 | 66361580 | E074 | -17172 |
chr16 | 66361741 | 66361948 | E074 | -16804 |
chr16 | 66361963 | 66362019 | E074 | -16733 |
chr16 | 66362037 | 66362087 | E074 | -16665 |
chr16 | 66362088 | 66362168 | E074 | -16584 |
chr16 | 66362321 | 66362417 | E074 | -16335 |
chr16 | 66366499 | 66366549 | E074 | -12203 |
chr16 | 66366607 | 66366941 | E074 | -11811 |
chr16 | 66366958 | 66367605 | E074 | -11147 |
chr16 | 66367657 | 66367782 | E074 | -10970 |
chr16 | 66368081 | 66368147 | E074 | -10605 |
chr16 | 66368900 | 66369017 | E074 | -9735 |
chr16 | 66369093 | 66369425 | E074 | -9327 |
chr16 | 66369444 | 66370207 | E074 | -8545 |
chr16 | 66377756 | 66377876 | E074 | -876 |
chr16 | 66378037 | 66378182 | E074 | -570 |
chr16 | 66378198 | 66378976 | E074 | 0 |
chr16 | 66400307 | 66400634 | E074 | 21555 |
chr16 | 66338056 | 66338691 | E081 | -40061 |
chr16 | 66338825 | 66338875 | E081 | -39877 |
chr16 | 66358556 | 66359114 | E081 | -19638 |
chr16 | 66360646 | 66361402 | E081 | -17350 |
chr16 | 66361438 | 66361521 | E081 | -17231 |
chr16 | 66361530 | 66361580 | E081 | -17172 |
chr16 | 66366499 | 66366549 | E081 | -12203 |
chr16 | 66366607 | 66366941 | E081 | -11811 |
chr16 | 66366958 | 66367605 | E081 | -11147 |
chr16 | 66367657 | 66367782 | E081 | -10970 |
chr16 | 66386803 | 66386843 | E081 | 8051 |
chr16 | 66386920 | 66387401 | E081 | 8168 |
chr16 | 66387439 | 66387606 | E081 | 8687 |
chr16 | 66387718 | 66387899 | E081 | 8966 |
chr16 | 66388006 | 66388056 | E081 | 9254 |
chr16 | 66388072 | 66388167 | E081 | 9320 |
chr16 | 66338056 | 66338691 | E082 | -40061 |
chr16 | 66338825 | 66338875 | E082 | -39877 |
chr16 | 66387439 | 66387606 | E082 | 8687 |
chr16 | 66387718 | 66387899 | E082 | 8966 |
chr16 | 66388006 | 66388056 | E082 | 9254 |
chr16 | 66388072 | 66388167 | E082 | 9320 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr16 | 66400641 | 66400808 | E067 | 21889 |
chr16 | 66400873 | 66400967 | E067 | 22121 |
chr16 | 66401098 | 66401224 | E067 | 22346 |
chr16 | 66401358 | 66401427 | E067 | 22606 |
chr16 | 66401488 | 66401550 | E067 | 22736 |
chr16 | 66401708 | 66401804 | E067 | 22956 |
chr16 | 66401884 | 66401989 | E067 | 23132 |
chr16 | 66400641 | 66400808 | E068 | 21889 |
chr16 | 66400873 | 66400967 | E068 | 22121 |
chr16 | 66401098 | 66401224 | E068 | 22346 |
chr16 | 66401358 | 66401427 | E068 | 22606 |
chr16 | 66401488 | 66401550 | E068 | 22736 |
chr16 | 66401708 | 66401804 | E068 | 22956 |
chr16 | 66401884 | 66401989 | E068 | 23132 |
chr16 | 66400641 | 66400808 | E069 | 21889 |
chr16 | 66400873 | 66400967 | E069 | 22121 |
chr16 | 66400641 | 66400808 | E071 | 21889 |
chr16 | 66400873 | 66400967 | E071 | 22121 |
chr16 | 66401098 | 66401224 | E071 | 22346 |
chr16 | 66401358 | 66401427 | E071 | 22606 |
chr16 | 66401488 | 66401550 | E071 | 22736 |
chr16 | 66401708 | 66401804 | E072 | 22956 |
chr16 | 66401884 | 66401989 | E072 | 23132 |
chr16 | 66400641 | 66400808 | E073 | 21889 |
chr16 | 66400873 | 66400967 | E073 | 22121 |
chr16 | 66401098 | 66401224 | E073 | 22346 |
chr16 | 66401358 | 66401427 | E073 | 22606 |
chr16 | 66401488 | 66401550 | E073 | 22736 |
chr16 | 66401708 | 66401804 | E073 | 22956 |
chr16 | 66401884 | 66401989 | E073 | 23132 |