rs11869735

Homo sapiens
A>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0238 (7154/29964,GnomAD)
G=0274 (7997/29118,TOPMED)
G=0220 (1102/5008,1000G)
G=0236 (909/3854,ALSPAC)
G=0238 (884/3708,TWINSUK)
chr17:68705649 (GRCh38.p7) (17q24.2)
AD
GWASCatalog
1   publication(s)
See rs on genome
37 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 17NC_000017.11:g.68705649A>G
GRCh37.p13 chr 17NC_000017.10:g.66701790A>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.664G=0.336
1000GenomesAmericanSub694A=0.660G=0.340
1000GenomesEast AsianSub1008A=0.861G=0.139
1000GenomesEuropeSub1006A=0.771G=0.229
1000GenomesGlobalStudy-wide5008A=0.780G=0.220
1000GenomesSouth AsianSub978A=0.940G=0.060
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.764G=0.236
The Genome Aggregation DatabaseAfricanSub8714A=0.688G=0.312
The Genome Aggregation DatabaseAmericanSub838A=0.650G=0.350
The Genome Aggregation DatabaseEast AsianSub1618A=0.851G=0.149
The Genome Aggregation DatabaseEuropeSub18492A=0.791G=0.208
The Genome Aggregation DatabaseGlobalStudy-wide29964A=0.761G=0.238
The Genome Aggregation DatabaseOtherSub302A=0.870G=0.130
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.725G=0.274
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.762G=0.238
PMID Title Author Journal
29460428Genomewide Association Study of Alcohol Dependence and Related Traits in a Thai Population.Gelernter JAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs118697354E-06alcohol dependence29460428

eQTL of rs11869735 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs11869735 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr176665294566653060E069-48730
chr176665337366653450E069-48340
chr176665346066653631E069-48159
chr176665374966653869E069-47921
chr176665831466658621E070-43169
chr176665866866659007E070-42783
chr176666657966666639E070-35151
chr176666671866666801E070-34989
chr176666691366666957E070-34833
chr176665337366653450E071-48340
chr176665346066653631E071-48159
chr176665374966653869E071-47921
chr176670090866702157E0730
chr176665754266657676E081-44114
chr176665784366657893E081-43897
chr176665796866658030E081-43760
chr176666129466661344E081-40446
chr176667892466679418E081-22372
chr176667947566679644E081-22146
chr176668052966680603E081-21187
chr176668083266680910E081-20880
chr176668094166681508E081-20282
chr176669391666694639E081-7151
chr176669464366695300E081-6490
chr176670090866702157E0810
chr176670220566702255E081415
chr176670235366702403E081563
chr176670290766703770E0811117
chr176673396066734107E08132170
chr176673413166734555E08132341
chr176673455866734693E08132768
chr176673493166734985E08133141
chr176673503766735203E08133247
chr176667892466679418E082-22372
chr176668083266680910E082-20880
chr176670235366702403E082563
chr176670290766703770E0821117