rs11930915

Homo sapiens
G>A / G>T
None
Check p-value
SNV (Single Nucleotide Variation)
A=0090 (2697/29956,GnomAD)
A=0107 (3139/29118,TOPMED)
A=0075 (376/5008,1000G)
A=0084 (324/3854,ALSPAC)
A=0081 (301/3708,TWINSUK)
chr4:188326619 (GRCh38.p7) (4q35.2)
ND
GWASdb2
1   publication(s)
See rs on genome
95 Enhancers around
8 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 4NC_000004.12:g.188326619G>A
GRCh38.p7 chr 4NC_000004.12:g.188326619G>T
GRCh37.p13 chr 4NC_000004.11:g.189247773G>A
GRCh37.p13 chr 4NC_000004.11:g.189247773G>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.824A=0.176
1000GenomesAmericanSub694G=0.940A=0.060
1000GenomesEast AsianSub1008G=1.000A=0.000
1000GenomesEuropeSub1006G=0.923A=0.077
1000GenomesGlobalStudy-wide5008G=0.925A=0.075
1000GenomesSouth AsianSub978G=0.970A=0.030
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.916A=0.084
The Genome Aggregation DatabaseAfricanSub8716G=0.837A=0.162
The Genome Aggregation DatabaseAmericanSub834G=0.950A=0.05,
The Genome Aggregation DatabaseEast AsianSub1620G=1.000A=0.000
The Genome Aggregation DatabaseEuropeSub18484G=0.934A=0.065
The Genome Aggregation DatabaseGlobalStudy-wide29956G=0.909A=0.090
The Genome Aggregation DatabaseOtherSub302G=0.930A=0.07,
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.892A=0.107
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.919A=0.081
PMID Title Author Journal
20158304A genomewide association study of nicotine and alcohol dependence in Australian and Dutch populations.Lind PATwin Res Hum Genet

P-Value

SNP ID p-value Traits Study
rs119309152.51E-05alcohol and nictotine co-dependence20158304

eQTL of rs11930915 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs11930915 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr43898579538985925E067-36266
chr43898597138986301E067-35890
chr43898661938986720E067-35471
chr43898775338988097E067-34094
chr43903915639039395E06716965
chr43903956339039946E06717372
chr43904018939040287E06717998
chr43904920439049281E06727013
chr43904945339049555E06727262
chr43904957839049624E06727387
chr43905621639056314E06734025
chr43905637339056491E06734182
chr43898579538985925E068-36266
chr43898597138986301E068-35890
chr43903915639039395E06816965
chr43903956339039946E06817372
chr43904018939040287E06817998
chr43904376539043873E06821574
chr43904920439049281E06827013
chr43904945339049555E06827262
chr43904957839049624E06827387
chr43904985839049899E06827667
chr43904996439050039E06827773
chr43905005939050228E06827868
chr43906465239064725E06842461
chr43906525139065316E06843060
chr43898579538985925E069-36266
chr43898597138986301E069-35890
chr43898661938986720E069-35471
chr43898775338988097E069-34094
chr43903915639039395E06916965
chr43903956339039946E06917372
chr43904018939040287E06917998
chr43904985839049899E06927667
chr43904996439050039E06927773
chr43905005939050228E06927868
chr43905324039053333E06931049
chr43906362139063742E06941430
chr43906525139065316E06943060
chr43898743038987675E070-34516
chr43906362139063742E07041430
chr43898597138986301E071-35890
chr43898661938986720E071-35471
chr43903915639039395E07116965
chr43903956339039946E07117372
chr43904420339044288E07122012
chr43904920439049281E07127013
chr43904945339049555E07127262
chr43904957839049624E07127387
chr43904985839049899E07127667
chr43904996439050039E07127773
chr43905005939050228E07127868
chr43905324039053333E07131049
chr43905621639056314E07134025
chr43905637339056491E07134182
chr43906465239064725E07142461
chr43906525139065316E07143060
chr43898579538985925E072-36266
chr43898597138986301E072-35890
chr43903915639039395E07216965
chr43903956339039946E07217372
chr43904018939040287E07217998
chr43905621639056314E07234025
chr43903915639039395E07316965
chr43903956339039946E07317372
chr43904920439049281E07327013
chr43904945339049555E07327262
chr43904957839049624E07327387
chr43905005939050228E07327868
chr43905324039053333E07331049
chr43905621639056314E07334025
chr43905637339056491E07334182
chr43903915639039395E07416965
chr43903956339039946E07417372
chr43904920439049281E07427013
chr43904945339049555E07427262
chr43904957839049624E07427387
chr43904985839049899E07427667
chr43904996439050039E07427773
chr43905005939050228E07427868
chr43905200039052047E07429809
chr43905220039052250E07430009
chr43905621639056314E07434025
chr43905637339056491E07434182
chr43898579538985925E081-36266
chr43898597138986301E081-35890
chr43898661938986720E081-35471
chr43898698238987416E081-34775
chr43898743038987675E081-34516
chr43898775338988097E081-34094
chr43898579538985925E082-36266
chr43898597138986301E082-35890
chr43898661938986720E082-35471
chr43898698238987416E082-34775
chr43898743038987675E082-34516










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr43904470639048168E06722515
chr43904470639048168E06822515
chr43904470639048168E06922515
chr43904470639048168E07122515
chr43904470639048168E07222515
chr43904470639048168E07322515
chr43904470639048168E07422515
chr43904470639048168E08222515