SNP Detail Info-rs11944332

Organism: Homo sapiens

Alleles: A>G

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

G=0108 (3236/29954,GnomAD)
G=0113 (3289/29118,TOPMED)
G=0091 (457/5008,1000G)
G=0136 (526/3854,ALSPAC)
G=0145 (538/3708,TWINSUK)

Position: chr4:173633681 (GRCh38.p7) (4q34.1)

Phenotype: CD

Dataset:

GWASdb2 | GWASCatalog

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.901	G=0.099
1000Genomes	American	Sub	694	A=0.920	G=0.080
1000Genomes	East Asian	Sub	1008	A=0.995	G=0.005
1000Genomes	Europe	Sub	1006	A=0.861	G=0.139
1000Genomes	Global	Study-wide	5008	A=0.909	G=0.091
1000Genomes	South Asian	Sub	978	A=0.870	G=0.130
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.864	G=0.136
The Genome Aggregation Database	African	Sub	8726	A=0.906	G=0.094
The Genome Aggregation Database	American	Sub	838	A=0.920	G=0.080
The Genome Aggregation Database	East Asian	Sub	1622	A=0.993	G=0.007
The Genome Aggregation Database	Europe	Sub	18466	A=0.875	G=0.124
The Genome Aggregation Database	Global	Study-wide	29954	A=0.892	G=0.108
The Genome Aggregation Database	Other	Sub	302	A=0.890	G=0.110
Trans-Omics for Precision Medicine	Global	Study-wide	29118	A=0.887	G=0.113
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.855	G=0.145

PMID	Title	Author	Journal
23958962	Genome-wide association study of cocaine dependence and related traits: FAM53B identified as a risk gene.	Gelernter J	Mol Psychiatry

SNP ID	p-value	Traits	Study
rs11944332	2E-06	cocaine dependence	23958962

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs11944332