rs11971315

Homo sapiens
G>A
None
Check p-value
SNV (Single Nucleotide Variation)
A=0102 (2983/29118,TOPMED)
A=0091 (2651/28950,GnomAD)
A=0126 (629/5008,1000G)
A=0044 (171/3854,ALSPAC)
A=0047 (173/3708,TWINSUK)
chr7:138018590 (GRCh38.p7) (7q33)
AD
GWASdb2
1   publication(s)
See rs on genome
256 Enhancers around
9 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 7NC_000007.14:g.138018590G>A
GRCh37.p13 chr 7NC_000007.13:g.137703336G>A

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.792A=0.208
1000GenomesAmericanSub694G=0.960A=0.040
1000GenomesEast AsianSub1008G=0.824A=0.176
1000GenomesEuropeSub1006G=0.939A=0.061
1000GenomesGlobalStudy-wide5008G=0.874A=0.126
1000GenomesSouth AsianSub978G=0.910A=0.090
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.956A=0.044
The Genome Aggregation DatabaseAfricanSub8566G=0.828A=0.172
The Genome Aggregation DatabaseAmericanSub746G=0.950A=0.050
The Genome Aggregation DatabaseEast AsianSub1606G=0.834A=0.166
The Genome Aggregation DatabaseEuropeSub17730G=0.951A=0.048
The Genome Aggregation DatabaseGlobalStudy-wide28950G=0.908A=0.091
The Genome Aggregation DatabaseOtherSub302G=0.960A=0.040
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.897A=0.102
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.953A=0.047
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs119713150.00055alcohol dependence20201924

eQTL of rs11971315 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs11971315 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr7137654643137654953E067-48383
chr7137655061137655802E067-47534
chr7137659246137659354E067-43982
chr7137659458137659798E067-43538
chr7137659937137661478E067-41858
chr7137663075137664199E067-39137
chr7137666606137666955E067-36381
chr7137666956137667087E067-36249
chr7137667174137667306E067-36030
chr7137667483137667533E067-35803
chr7137667547137667637E067-35699
chr7137667653137667703E067-35633
chr7137667919137667969E067-35367
chr7137668035137668192E067-35144
chr7137668201137668804E067-34532
chr7137668835137668897E067-34439
chr7137669031137669369E067-33967
chr7137669432137670738E067-32598
chr7137670751137671117E067-32219
chr7137673884137674196E067-29140
chr7137674412137674475E067-28861
chr7137674484137674569E067-28767
chr7137676719137678164E067-25172
chr7137678769137679489E067-23847
chr7137655061137655802E068-47534
chr7137658017137658061E068-45275
chr7137658243137658303E068-45033
chr7137658370137658502E068-44834
chr7137658542137658705E068-44631
chr7137659246137659354E068-43982
chr7137659458137659798E068-43538
chr7137659937137661478E068-41858
chr7137661577137661759E068-41577
chr7137661855137661971E068-41365
chr7137662025137662259E068-41077
chr7137663075137664199E068-39137
chr7137665385137665490E068-37846
chr7137665845137665920E068-37416
chr7137665976137666327E068-37009
chr7137666334137666597E068-36739
chr7137666606137666955E068-36381
chr7137666956137667087E068-36249
chr7137667174137667306E068-36030
chr7137667483137667533E068-35803
chr7137667547137667637E068-35699
chr7137667653137667703E068-35633
chr7137667919137667969E068-35367
chr7137668035137668192E068-35144
chr7137668201137668804E068-34532
chr7137668835137668897E068-34439
chr7137669031137669369E068-33967
chr7137669432137670738E068-32598
chr7137670751137671117E068-32219
chr7137671123137672100E068-31236
chr7137672175137672289E068-31047
chr7137672523137673170E068-30166
chr7137673261137673351E068-29985
chr7137673452137673579E068-29757
chr7137673884137674196E068-29140
chr7137674228137674302E068-29034
chr7137674412137674475E068-28861
chr7137674484137674569E068-28767
chr7137674618137675944E068-27392
chr7137678769137679489E068-23847
chr7137681032137681623E068-21713
chr7137682821137684112E068-19224
chr7137655061137655802E069-47534
chr7137658017137658061E069-45275
chr7137658243137658303E069-45033
chr7137658370137658502E069-44834
chr7137658542137658705E069-44631
chr7137659023137659073E069-44263
chr7137659111137659161E069-44175
chr7137659246137659354E069-43982
chr7137659458137659798E069-43538
chr7137659937137661478E069-41858
chr7137661577137661759E069-41577
chr7137661855137661971E069-41365
chr7137662025137662259E069-41077
chr7137663075137664199E069-39137
chr7137667919137667969E069-35367
chr7137668035137668192E069-35144
chr7137668201137668804E069-34532
chr7137668835137668897E069-34439
chr7137669031137669369E069-33967
chr7137669432137670738E069-32598
chr7137670751137671117E069-32219
chr7137671123137672100E069-31236
chr7137672175137672289E069-31047
chr7137672348137672402E069-30934
chr7137672414137672464E069-30872
chr7137672523137673170E069-30166
chr7137673261137673351E069-29985
chr7137673452137673579E069-29757
chr7137673884137674196E069-29140
chr7137674228137674302E069-29034
chr7137674412137674475E069-28861
chr7137674484137674569E069-28767
chr7137674618137675944E069-27392
chr7137676719137678164E069-25172
chr7137678190137678481E069-24855
chr7137678485137678753E069-24583
chr7137678769137679489E069-23847
chr7137681032137681623E069-21713
chr7137681744137681877E069-21459
chr7137681912137681962E069-21374
chr7137682821137684112E069-19224
chr7137654643137654953E071-48383
chr7137655061137655802E071-47534
chr7137658243137658303E071-45033
chr7137658370137658502E071-44834
chr7137658542137658705E071-44631
chr7137659023137659073E071-44263
chr7137659111137659161E071-44175
chr7137659246137659354E071-43982
chr7137659458137659798E071-43538
chr7137659937137661478E071-41858
chr7137661577137661759E071-41577
chr7137663075137664199E071-39137
chr7137667919137667969E071-35367
chr7137668035137668192E071-35144
chr7137668201137668804E071-34532
chr7137668835137668897E071-34439
chr7137669031137669369E071-33967
chr7137669432137670738E071-32598
chr7137670751137671117E071-32219
chr7137671123137672100E071-31236
chr7137672175137672289E071-31047
chr7137672348137672402E071-30934
chr7137672414137672464E071-30872
chr7137672523137673170E071-30166
chr7137673261137673351E071-29985
chr7137673452137673579E071-29757
chr7137673884137674196E071-29140
chr7137674228137674302E071-29034
chr7137674412137674475E071-28861
chr7137674484137674569E071-28767
chr7137674618137675944E071-27392
chr7137676719137678164E071-25172
chr7137678190137678481E071-24855
chr7137678485137678753E071-24583
chr7137678769137679489E071-23847
chr7137679678137679728E071-23608
chr7137679755137680042E071-23294
chr7137681744137681877E071-21459
chr7137681912137681962E071-21374
chr7137682215137682265E071-21071
chr7137682368137682456E071-20880
chr7137682821137684112E071-19224
chr7137693374137693887E071-9449
chr7137655061137655802E072-47534
chr7137656846137656902E072-46434
chr7137658017137658061E072-45275
chr7137658243137658303E072-45033
chr7137658370137658502E072-44834
chr7137658542137658705E072-44631
chr7137659246137659354E072-43982
chr7137659458137659798E072-43538
chr7137659937137661478E072-41858
chr7137661577137661759E072-41577
chr7137661855137661971E072-41365
chr7137662025137662259E072-41077
chr7137663075137664199E072-39137
chr7137667919137667969E072-35367
chr7137668035137668192E072-35144
chr7137668201137668804E072-34532
chr7137668835137668897E072-34439
chr7137669031137669369E072-33967
chr7137671123137672100E072-31236
chr7137672414137672464E072-30872
chr7137672523137673170E072-30166
chr7137673884137674196E072-29140
chr7137674228137674302E072-29034
chr7137674412137674475E072-28861
chr7137674484137674569E072-28767
chr7137674618137675944E072-27392
chr7137676719137678164E072-25172
chr7137678190137678481E072-24855
chr7137678485137678753E072-24583
chr7137678769137679489E072-23847
chr7137681032137681623E072-21713
chr7137681744137681877E072-21459
chr7137681912137681962E072-21374
chr7137682821137684112E072-19224
chr7137658017137658061E073-45275
chr7137658243137658303E073-45033
chr7137658370137658502E073-44834
chr7137659458137659798E073-43538
chr7137659937137661478E073-41858
chr7137663075137664199E073-39137
chr7137666606137666955E073-36381
chr7137666956137667087E073-36249
chr7137667174137667306E073-36030
chr7137667483137667533E073-35803
chr7137667547137667637E073-35699
chr7137667653137667703E073-35633
chr7137667919137667969E073-35367
chr7137668035137668192E073-35144
chr7137668201137668804E073-34532
chr7137668835137668897E073-34439
chr7137669031137669369E073-33967
chr7137673261137673351E073-29985
chr7137673452137673579E073-29757
chr7137673884137674196E073-29140
chr7137674228137674302E073-29034
chr7137674412137674475E073-28861
chr7137674484137674569E073-28767
chr7137676719137678164E073-25172
chr7137658017137658061E074-45275
chr7137658243137658303E074-45033
chr7137658370137658502E074-44834
chr7137658542137658705E074-44631
chr7137659023137659073E074-44263
chr7137659111137659161E074-44175
chr7137659246137659354E074-43982
chr7137659458137659798E074-43538
chr7137659937137661478E074-41858
chr7137661855137661971E074-41365
chr7137663075137664199E074-39137
chr7137664500137664782E074-38554
chr7137664978137665028E074-38308
chr7137665063137665179E074-38157
chr7137665211137665277E074-38059
chr7137665385137665490E074-37846
chr7137665845137665920E074-37416
chr7137667547137667637E074-35699
chr7137667653137667703E074-35633
chr7137667919137667969E074-35367
chr7137668035137668192E074-35144
chr7137668201137668804E074-34532
chr7137668835137668897E074-34439
chr7137669031137669369E074-33967
chr7137669432137670738E074-32598
chr7137671123137672100E074-31236
chr7137672175137672289E074-31047
chr7137672348137672402E074-30934
chr7137672414137672464E074-30872
chr7137672523137673170E074-30166
chr7137673261137673351E074-29985
chr7137673452137673579E074-29757
chr7137673884137674196E074-29140
chr7137674228137674302E074-29034
chr7137674412137674475E074-28861
chr7137674484137674569E074-28767
chr7137674618137675944E074-27392
chr7137676719137678164E074-25172
chr7137678190137678481E074-24855
chr7137678769137679489E074-23847
chr7137679678137679728E074-23608
chr7137679755137680042E074-23294
chr7137680641137680727E074-22609
chr7137681032137681623E074-21713
chr7137681744137681877E074-21459
chr7137681912137681962E074-21374
chr7137682821137684112E074-19224
chr7137671123137672100E081-31236








Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr7137684149137687909E067-15427
chr7137684149137687909E068-15427
chr7137684149137687909E069-15427
chr7137684149137687909E070-15427
chr7137684149137687909E071-15427
chr7137684149137687909E072-15427
chr7137684149137687909E073-15427
chr7137684149137687909E074-15427
chr7137684149137687909E082-15427