rs12002381

Organism: Homo sapiens

Alleles: C>T

Gene : Feature

PTPRD : Intron Variant

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

T=0090 (2724/29974,GnomAD)
T=0139 (4067/29118,TOPMED)
T=0092 (460/5008,1000G)
T=0031 (119/3854,ALSPAC)
T=0029 (108/3708,TWINSUK)

Position: chr9:8870553 (GRCh38.p7) (9p24.1)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 620 Enhancers around

Promoter: 69 Promoters around

Variant Details Frequency Publications p-values eSNP meSNP

Genomic Coordinates

Sequence Name	Change(s)
GRCh38.p7 chr 9	NC_000009.12:g.8870553C>T
GRCh37.p13 chr 9	NC_000009.11:g.8870553C>T
PTPRD RefSeqGene	NG_033963.1:g.1747171G>A

Gene: PTPRD, protein tyrosine phosphatase, receptor type D(minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
PTPRD transcript variant 1	NM_002839.3:c.	N/A	Intron Variant
PTPRD transcript variant 5	NM_001040712.2:c.	N/A	Genic Upstream Transcript Variant
PTPRD transcript variant 6	NM_001171025.1:c.	N/A	Genic Upstream Transcript Variant
PTPRD transcript variant 2	NM_130391.3:c.	N/A	Genic Upstream Transcript Variant
PTPRD transcript variant 3	NM_130392.3:c.	N/A	Genic Upstream Transcript Variant
PTPRD transcript variant 4	NM_130393.3:c.	N/A	Genic Upstream Transcript Variant
PTPRD transcript variant X10	XM_006716817.3:c.	N/A	Intron Variant
PTPRD transcript variant X24	XM_006716823.2:c.	N/A	Intron Variant
PTPRD transcript variant X26	XM_006716825.3:c.	N/A	Intron Variant
PTPRD transcript variant X28	XM_006716827.3:c.	N/A	Intron Variant
PTPRD transcript variant X40	XM_006716832.3:c.	N/A	Intron Variant
PTPRD transcript variant X41	XM_006716833.3:c.	N/A	Intron Variant
PTPRD transcript variant X42	XM_006716834.3:c.	N/A	Intron Variant
PTPRD transcript variant X45	XM_006716835.3:c.	N/A	Intron Variant
PTPRD transcript variant X48	XM_006716837.3:c.	N/A	Intron Variant
PTPRD transcript variant X49	XM_006716838.3:c.	N/A	Intron Variant
PTPRD transcript variant X50	XM_006716839.3:c.	N/A	Intron Variant
PTPRD transcript variant X25	XM_011517992.2:c.	N/A	Intron Variant
PTPRD transcript variant X1	XM_017014958.1:c.	N/A	Intron Variant
PTPRD transcript variant X2	XM_017014959.1:c.	N/A	Intron Variant
PTPRD transcript variant X3	XM_017014960.1:c.	N/A	Intron Variant
PTPRD transcript variant X4	XM_017014961.1:c.	N/A	Intron Variant
PTPRD transcript variant X6	XM_017014963.1:c.	N/A	Intron Variant
PTPRD transcript variant X7	XM_017014964.1:c.	N/A	Intron Variant
PTPRD transcript variant X8	XM_017014965.1:c.	N/A	Intron Variant
PTPRD transcript variant X9	XM_017014966.1:c.	N/A	Intron Variant
PTPRD transcript variant X11	XM_017014967.1:c.	N/A	Intron Variant
PTPRD transcript variant X12	XM_017014968.1:c.	N/A	Intron Variant
PTPRD transcript variant X13	XM_017014969.1:c.	N/A	Intron Variant
PTPRD transcript variant X14	XM_017014970.1:c.	N/A	Intron Variant
PTPRD transcript variant X15	XM_017014971.1:c.	N/A	Intron Variant
PTPRD transcript variant X16	XM_017014972.1:c.	N/A	Intron Variant
PTPRD transcript variant X17	XM_017014973.1:c.	N/A	Intron Variant
PTPRD transcript variant X18	XM_017014974.1:c.	N/A	Intron Variant
PTPRD transcript variant X19	XM_017014975.1:c.	N/A	Intron Variant
PTPRD transcript variant X20	XM_017014976.1:c.	N/A	Intron Variant
PTPRD transcript variant X21	XM_017014977.1:c.	N/A	Intron Variant
PTPRD transcript variant X22	XM_017014978.1:c.	N/A	Intron Variant
PTPRD transcript variant X23	XM_017014979.1:c.	N/A	Intron Variant
PTPRD transcript variant X27	XM_017014980.1:c.	N/A	Intron Variant
PTPRD transcript variant X29	XM_017014981.1:c.	N/A	Intron Variant
PTPRD transcript variant X30	XM_017014982.1:c.	N/A	Intron Variant
PTPRD transcript variant X31	XM_017014983.1:c.	N/A	Intron Variant
PTPRD transcript variant X32	XM_017014984.1:c.	N/A	Intron Variant
PTPRD transcript variant X33	XM_017014985.1:c.	N/A	Intron Variant
PTPRD transcript variant X34	XM_017014986.1:c.	N/A	Intron Variant
PTPRD transcript variant X35	XM_017014987.1:c.	N/A	Intron Variant
PTPRD transcript variant X36	XM_017014988.1:c.	N/A	Intron Variant
PTPRD transcript variant X37	XM_017014989.1:c.	N/A	Intron Variant
PTPRD transcript variant X38	XM_017014990.1:c.	N/A	Intron Variant
PTPRD transcript variant X39	XM_017014991.1:c.	N/A	Intron Variant
PTPRD transcript variant X43	XM_017014992.1:c.	N/A	Intron Variant
PTPRD transcript variant X44	XM_017014993.1:c.	N/A	Intron Variant
PTPRD transcript variant X46	XM_017014994.1:c.	N/A	Intron Variant
PTPRD transcript variant X47	XM_017014995.1:c.	N/A	Intron Variant
PTPRD transcript variant X5	XM_017014962.1:c.	N/A	Genic Upstream Transcript Variant

Population Frequency

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	C=0.707	T=0.293
1000Genomes	American	Sub	694	C=0.940	T=0.060
1000Genomes	East Asian	Sub	1008	C=0.997	T=0.003
1000Genomes	Europe	Sub	1006	C=0.976	T=0.024
1000Genomes	Global	Study-wide	5008	C=0.908	T=0.092
1000Genomes	South Asian	Sub	978	C=1.000	T=0.000
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.969	T=0.031
The Genome Aggregation Database	African	Sub	8714	C=0.755	T=0.245
The Genome Aggregation Database	American	Sub	838	C=0.970	T=0.030
The Genome Aggregation Database	East Asian	Sub	1618	C=0.997	T=0.003
The Genome Aggregation Database	Europe	Sub	18502	C=0.970	T=0.029
The Genome Aggregation Database	Global	Study-wide	29974	C=0.909	T=0.090
The Genome Aggregation Database	Other	Sub	302	C=0.950	T=0.050
Trans-Omics for Precision Medicine	Global	Study-wide	29118	C=0.860	T=0.139
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.971	T=0.029

PMID	Title	Author	Journal
20201924	Genome-wide association study of alcohol dependence implicates a region on chromosome 11.	Edenberg HJ	Alcohol Clin Exp Res

P-Value

SNP ID	p-value	Traits	Study
rs12002381	0.00031	alcohol dependence	20201924

eQTL of rs12002381 in Brain tissues (GTEx Analysis Release V7)

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

meQTL of rs12002381 in Fetal Brain

Probe ID	Position	Gene	beta	p-value
cg15115423	chr10:3166606	PFKP	-0.0312952558690688	1.0295e-9

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr9	8822406	8822513	E067	-48040
chr9	8822700	8822915	E067	-47638
chr9	8822983	8823075	E067	-47478
chr9	8823094	8823144	E067	-47409
chr9	8823362	8823465	E067	-47088
chr9	8823500	8823572	E067	-46981
chr9	8824061	8824309	E067	-46244
chr9	8828441	8828491	E067	-42062
chr9	8829246	8829296	E067	-41257
chr9	8829307	8829367	E067	-41186
chr9	8832857	8832926	E067	-37627
chr9	8833051	8833260	E067	-37293
chr9	8833268	8833375	E067	-37178
chr9	8840887	8841003	E067	-29550
chr9	8841025	8841075	E067	-29478
chr9	8841318	8841375	E067	-29178
chr9	8842588	8842673	E067	-27880
chr9	8842716	8842787	E067	-27766
chr9	8842826	8843252	E067	-27301
chr9	8843425	8843475	E067	-27078
chr9	8843767	8843817	E067	-26736
chr9	8845044	8845124	E067	-25429
chr9	8846581	8846704	E067	-23849
chr9	8846892	8846957	E067	-23596
chr9	8847646	8847811	E067	-22742
chr9	8847844	8848164	E067	-22389
chr9	8850797	8851201	E067	-19352
chr9	8851436	8851576	E067	-18977
chr9	8852877	8852996	E067	-17557
chr9	8853216	8853351	E067	-17202
chr9	8853428	8853647	E067	-16906
chr9	8853671	8853924	E067	-16629
chr9	8859932	8860050	E067	-10503
chr9	8860178	8860477	E067	-10076
chr9	8860579	8860680	E067	-9873
chr9	8860850	8860926	E067	-9627
chr9	8860929	8861393	E067	-9160
chr9	8864009	8864567	E067	-5986
chr9	8864596	8864780	E067	-5773
chr9	8867299	8867478	E067	-3075
chr9	8869671	8869939	E067	-614
chr9	8869949	8870106	E067	-447
chr9	8870147	8870207	E067	-346
chr9	8870379	8870521	E067	-32
chr9	8870524	8870625	E067	0
chr9	8870648	8871153	E067	95
chr9	8871165	8871566	E067	612
chr9	8871591	8871671	E067	1038
chr9	8871970	8872098	E067	1417
chr9	8872115	8872362	E067	1562
chr9	8872430	8872497	E067	1877
chr9	8872787	8872965	E067	2234
chr9	8873062	8873137	E067	2509
chr9	8873740	8873854	E067	3187
chr9	8879121	8879172	E067	8568
chr9	8892092	8892290	E067	21539
chr9	8900911	8900962	E067	30358
chr9	8901017	8901208	E067	30464
chr9	8901233	8901686	E067	30680
chr9	8901753	8901961	E067	31200
chr9	8914931	8914981	E067	44378
chr9	8915006	8915046	E067	44453
chr9	8915188	8915238	E067	44635
chr9	8915619	8915669	E067	45066
chr9	8918303	8918368	E067	47750
chr9	8822700	8822915	E068	-47638
chr9	8822983	8823075	E068	-47478
chr9	8823094	8823144	E068	-47409
chr9	8823362	8823465	E068	-47088
chr9	8823500	8823572	E068	-46981
chr9	8824061	8824309	E068	-46244
chr9	8829246	8829296	E068	-41257
chr9	8829307	8829367	E068	-41186
chr9	8831011	8831157	E068	-39396
chr9	8831361	8831411	E068	-39142
chr9	8831539	8831593	E068	-38960
chr9	8831762	8831856	E068	-38697
chr9	8831978	8832044	E068	-38509
chr9	8832857	8832926	E068	-37627
chr9	8833051	8833260	E068	-37293
chr9	8834791	8835003	E068	-35550
chr9	8835108	8835556	E068	-34997
chr9	8842588	8842673	E068	-27880
chr9	8842716	8842787	E068	-27766
chr9	8842826	8843252	E068	-27301
chr9	8845044	8845124	E068	-25429
chr9	8845824	8846176	E068	-24377
chr9	8846581	8846704	E068	-23849
chr9	8846892	8846957	E068	-23596
chr9	8852087	8852176	E068	-18377
chr9	8852415	8852579	E068	-17974
chr9	8852709	8852749	E068	-17804
chr9	8852780	8852830	E068	-17723
chr9	8852877	8852996	E068	-17557
chr9	8853216	8853351	E068	-17202
chr9	8853428	8853647	E068	-16906
chr9	8853671	8853924	E068	-16629
chr9	8854154	8854216	E068	-16337
chr9	8860178	8860477	E068	-10076
chr9	8860579	8860680	E068	-9873
chr9	8860850	8860926	E068	-9627
chr9	8864009	8864567	E068	-5986
chr9	8865670	8865801	E068	-4752
chr9	8865867	8865998	E068	-4555
chr9	8866498	8866716	E068	-3837
chr9	8866893	8866966	E068	-3587
chr9	8867067	8867147	E068	-3406
chr9	8867226	8867288	E068	-3265
chr9	8867299	8867478	E068	-3075
chr9	8868057	8868107	E068	-2446
chr9	8868545	8868630	E068	-1923
chr9	8868699	8869010	E068	-1543
chr9	8869233	8869287	E068	-1266
chr9	8869350	8869427	E068	-1126
chr9	8869503	8869632	E068	-921
chr9	8869671	8869939	E068	-614
chr9	8869949	8870106	E068	-447
chr9	8870147	8870207	E068	-346
chr9	8870379	8870521	E068	-32
chr9	8870524	8870625	E068	0
chr9	8871591	8871671	E068	1038
chr9	8871970	8872098	E068	1417
chr9	8872115	8872362	E068	1562
chr9	8872430	8872497	E068	1877
chr9	8872787	8872965	E068	2234
chr9	8873740	8873854	E068	3187
chr9	8877798	8877874	E068	7245
chr9	8877958	8878008	E068	7405
chr9	8878199	8878299	E068	7646
chr9	8878362	8878430	E068	7809
chr9	8879783	8879823	E068	9230
chr9	8892092	8892290	E068	21539
chr9	8917992	8918042	E068	47439
chr9	8918187	8918237	E068	47634
chr9	8821134	8821212	E069	-49341
chr9	8821273	8821313	E069	-49240
chr9	8821360	8821604	E069	-48949
chr9	8821681	8821721	E069	-48832
chr9	8822700	8822915	E069	-47638
chr9	8822983	8823075	E069	-47478
chr9	8823094	8823144	E069	-47409
chr9	8825686	8826092	E069	-44461
chr9	8828441	8828491	E069	-42062
chr9	8828803	8829057	E069	-41496
chr9	8829134	8829192	E069	-41361
chr9	8829246	8829296	E069	-41257
chr9	8829307	8829367	E069	-41186
chr9	8831539	8831593	E069	-38960
chr9	8831762	8831856	E069	-38697
chr9	8831978	8832044	E069	-38509
chr9	8832857	8832926	E069	-37627
chr9	8833051	8833260	E069	-37293
chr9	8833268	8833375	E069	-37178
chr9	8835108	8835556	E069	-34997
chr9	8840887	8841003	E069	-29550
chr9	8841025	8841075	E069	-29478
chr9	8842588	8842673	E069	-27880
chr9	8842716	8842787	E069	-27766
chr9	8842826	8843252	E069	-27301
chr9	8843425	8843475	E069	-27078
chr9	8843767	8843817	E069	-26736
chr9	8845044	8845124	E069	-25429
chr9	8845348	8845434	E069	-25119
chr9	8845444	8845605	E069	-24948
chr9	8845617	8845771	E069	-24782
chr9	8845824	8846176	E069	-24377
chr9	8846581	8846704	E069	-23849
chr9	8846892	8846957	E069	-23596
chr9	8850151	8850201	E069	-20352
chr9	8850797	8851201	E069	-19352
chr9	8851436	8851576	E069	-18977
chr9	8852087	8852176	E069	-18377
chr9	8852415	8852579	E069	-17974
chr9	8852709	8852749	E069	-17804
chr9	8852780	8852830	E069	-17723
chr9	8852877	8852996	E069	-17557
chr9	8853216	8853351	E069	-17202
chr9	8853428	8853647	E069	-16906
chr9	8860178	8860477	E069	-10076
chr9	8860579	8860680	E069	-9873
chr9	8860850	8860926	E069	-9627
chr9	8860929	8861393	E069	-9160
chr9	8863124	8863382	E069	-7171
chr9	8863563	8863613	E069	-6940
chr9	8864009	8864567	E069	-5986
chr9	8864596	8864780	E069	-5773
chr9	8865670	8865801	E069	-4752
chr9	8865867	8865998	E069	-4555
chr9	8866498	8866716	E069	-3837
chr9	8866893	8866966	E069	-3587
chr9	8867067	8867147	E069	-3406
chr9	8867226	8867288	E069	-3265
chr9	8867299	8867478	E069	-3075
chr9	8868057	8868107	E069	-2446
chr9	8869233	8869287	E069	-1266
chr9	8869350	8869427	E069	-1126
chr9	8869503	8869632	E069	-921
chr9	8869671	8869939	E069	-614
chr9	8869949	8870106	E069	-447
chr9	8870147	8870207	E069	-346
chr9	8870379	8870521	E069	-32
chr9	8870524	8870625	E069	0
chr9	8870648	8871153	E069	95
chr9	8871165	8871566	E069	612
chr9	8871591	8871671	E069	1038
chr9	8871970	8872098	E069	1417
chr9	8872115	8872362	E069	1562
chr9	8872430	8872497	E069	1877
chr9	8872787	8872965	E069	2234
chr9	8873062	8873137	E069	2509
chr9	8873740	8873854	E069	3187
chr9	8877798	8877874	E069	7245
chr9	8877958	8878008	E069	7405
chr9	8878199	8878299	E069	7646
chr9	8878362	8878430	E069	7809
chr9	8879121	8879172	E069	8568
chr9	8879406	8879494	E069	8853
chr9	8886644	8886911	E069	16091
chr9	8886997	8887047	E069	16444
chr9	8890848	8890968	E069	20295
chr9	8891168	8891218	E069	20615
chr9	8892092	8892290	E069	21539
chr9	8894945	8895017	E069	24392
chr9	8895072	8895603	E069	24519
chr9	8899422	8899776	E069	28869
chr9	8901017	8901208	E069	30464
chr9	8901233	8901686	E069	30680
chr9	8901753	8901961	E069	31200
chr9	8915619	8915669	E069	45066
chr9	8917454	8917563	E069	46901
chr9	8917992	8918042	E069	47439
chr9	8918187	8918237	E069	47634
chr9	8842588	8842673	E070	-27880
chr9	8842716	8842787	E070	-27766
chr9	8842826	8843252	E070	-27301
chr9	8843425	8843475	E070	-27078
chr9	8845044	8845124	E070	-25429
chr9	8845348	8845434	E070	-25119
chr9	8845444	8845605	E070	-24948
chr9	8845617	8845771	E070	-24782
chr9	8845824	8846176	E070	-24377
chr9	8846581	8846704	E070	-23849
chr9	8846892	8846957	E070	-23596
chr9	8847073	8847140	E070	-23413
chr9	8847437	8847588	E070	-22965
chr9	8847646	8847811	E070	-22742
chr9	8847844	8848164	E070	-22389
chr9	8850797	8851201	E070	-19352
chr9	8851436	8851576	E070	-18977
chr9	8852780	8852830	E070	-17723
chr9	8852877	8852996	E070	-17557
chr9	8853216	8853351	E070	-17202
chr9	8853428	8853647	E070	-16906
chr9	8853671	8853924	E070	-16629
chr9	8854154	8854216	E070	-16337
chr9	8859932	8860050	E070	-10503
chr9	8860178	8860477	E070	-10076
chr9	8860579	8860680	E070	-9873
chr9	8867226	8867288	E070	-3265
chr9	8867299	8867478	E070	-3075
chr9	8870648	8871153	E070	95
chr9	8901017	8901208	E070	30464
chr9	8901233	8901686	E070	30680
chr9	8901753	8901961	E070	31200
chr9	8902136	8902229	E070	31583
chr9	8821134	8821212	E071	-49341
chr9	8821273	8821313	E071	-49240
chr9	8821360	8821604	E071	-48949
chr9	8823362	8823465	E071	-47088
chr9	8823500	8823572	E071	-46981
chr9	8824061	8824309	E071	-46244
chr9	8825000	8825050	E071	-45503
chr9	8825055	8825200	E071	-45353
chr9	8828441	8828491	E071	-42062
chr9	8829134	8829192	E071	-41361
chr9	8829246	8829296	E071	-41257
chr9	8829307	8829367	E071	-41186
chr9	8831361	8831411	E071	-39142
chr9	8831539	8831593	E071	-38960
chr9	8831762	8831856	E071	-38697
chr9	8831978	8832044	E071	-38509
chr9	8832857	8832926	E071	-37627
chr9	8833051	8833260	E071	-37293
chr9	8840519	8840569	E071	-29984
chr9	8840887	8841003	E071	-29550
chr9	8841025	8841075	E071	-29478
chr9	8841318	8841375	E071	-29178
chr9	8841414	8841518	E071	-29035
chr9	8842588	8842673	E071	-27880
chr9	8842716	8842787	E071	-27766
chr9	8842826	8843252	E071	-27301
chr9	8843425	8843475	E071	-27078
chr9	8843767	8843817	E071	-26736
chr9	8845044	8845124	E071	-25429
chr9	8845348	8845434	E071	-25119
chr9	8845444	8845605	E071	-24948
chr9	8845824	8846176	E071	-24377
chr9	8846581	8846704	E071	-23849
chr9	8846892	8846957	E071	-23596
chr9	8849686	8849763	E071	-20790
chr9	8849782	8849941	E071	-20612
chr9	8850797	8851201	E071	-19352
chr9	8851436	8851576	E071	-18977
chr9	8852087	8852176	E071	-18377
chr9	8859932	8860050	E071	-10503
chr9	8860178	8860477	E071	-10076
chr9	8860579	8860680	E071	-9873
chr9	8860850	8860926	E071	-9627
chr9	8860929	8861393	E071	-9160
chr9	8862499	8862549	E071	-8004
chr9	8863124	8863382	E071	-7171
chr9	8863563	8863613	E071	-6940
chr9	8864009	8864567	E071	-5986
chr9	8866498	8866716	E071	-3837
chr9	8866893	8866966	E071	-3587
chr9	8867067	8867147	E071	-3406
chr9	8868057	8868107	E071	-2446
chr9	8868545	8868630	E071	-1923
chr9	8868699	8869010	E071	-1543
chr9	8869233	8869287	E071	-1266
chr9	8869350	8869427	E071	-1126
chr9	8869503	8869632	E071	-921
chr9	8869671	8869939	E071	-614
chr9	8869949	8870106	E071	-447
chr9	8870147	8870207	E071	-346
chr9	8870379	8870521	E071	-32
chr9	8870524	8870625	E071	0
chr9	8871165	8871566	E071	612
chr9	8871591	8871671	E071	1038
chr9	8872430	8872497	E071	1877
chr9	8872787	8872965	E071	2234
chr9	8873062	8873137	E071	2509
chr9	8875686	8875740	E071	5133
chr9	8875811	8875917	E071	5258
chr9	8875941	8876039	E071	5388
chr9	8876392	8876604	E071	5839
chr9	8876972	8877022	E071	6419
chr9	8877251	8877301	E071	6698
chr9	8877505	8877549	E071	6952
chr9	8877798	8877874	E071	7245
chr9	8877958	8878008	E071	7405
chr9	8878199	8878299	E071	7646
chr9	8878362	8878430	E071	7809
chr9	8879121	8879172	E071	8568
chr9	8879406	8879494	E071	8853
chr9	8879724	8879774	E071	9171
chr9	8879783	8879823	E071	9230
chr9	8880201	8880283	E071	9648
chr9	8880354	8880490	E071	9801
chr9	8886644	8886911	E071	16091
chr9	8886997	8887047	E071	16444
chr9	8887406	8887665	E071	16853
chr9	8887814	8887873	E071	17261
chr9	8887951	8887991	E071	17398
chr9	8888062	8888158	E071	17509
chr9	8892092	8892290	E071	21539
chr9	8893970	8894054	E071	23417
chr9	8894945	8895017	E071	24392
chr9	8895072	8895603	E071	24519
chr9	8899422	8899776	E071	28869
chr9	8901017	8901208	E071	30464
chr9	8901233	8901686	E071	30680
chr9	8901753	8901961	E071	31200
chr9	8914931	8914981	E071	44378
chr9	8915006	8915046	E071	44453
chr9	8915188	8915238	E071	44635
chr9	8915619	8915669	E071	45066
chr9	8917454	8917563	E071	46901
chr9	8917992	8918042	E071	47439
chr9	8918187	8918237	E071	47634
chr9	8918303	8918368	E071	47750
chr9	8821681	8821721	E072	-48832
chr9	8821977	8822155	E072	-48398
chr9	8822406	8822513	E072	-48040
chr9	8822700	8822915	E072	-47638
chr9	8822983	8823075	E072	-47478
chr9	8823094	8823144	E072	-47409
chr9	8824061	8824309	E072	-46244
chr9	8825000	8825050	E072	-45503
chr9	8825055	8825200	E072	-45353
chr9	8825576	8825667	E072	-44886
chr9	8825686	8826092	E072	-44461
chr9	8826397	8826502	E072	-44051
chr9	8828271	8828409	E072	-42144
chr9	8831011	8831157	E072	-39396
chr9	8831361	8831411	E072	-39142
chr9	8831539	8831593	E072	-38960
chr9	8831762	8831856	E072	-38697
chr9	8831978	8832044	E072	-38509
chr9	8832857	8832926	E072	-37627
chr9	8833051	8833260	E072	-37293
chr9	8833268	8833375	E072	-37178
chr9	8834791	8835003	E072	-35550
chr9	8835108	8835556	E072	-34997
chr9	8836240	8836515	E072	-34038
chr9	8840519	8840569	E072	-29984
chr9	8840887	8841003	E072	-29550
chr9	8841025	8841075	E072	-29478
chr9	8841318	8841375	E072	-29178
chr9	8842826	8843252	E072	-27301
chr9	8843425	8843475	E072	-27078
chr9	8843767	8843817	E072	-26736
chr9	8845044	8845124	E072	-25429
chr9	8845348	8845434	E072	-25119
chr9	8845444	8845605	E072	-24948
chr9	8845824	8846176	E072	-24377
chr9	8846581	8846704	E072	-23849
chr9	8846892	8846957	E072	-23596
chr9	8847073	8847140	E072	-23413
chr9	8847437	8847588	E072	-22965
chr9	8847646	8847811	E072	-22742
chr9	8847844	8848164	E072	-22389
chr9	8851436	8851576	E072	-18977
chr9	8852087	8852176	E072	-18377
chr9	8852415	8852579	E072	-17974
chr9	8852709	8852749	E072	-17804
chr9	8852780	8852830	E072	-17723
chr9	8860579	8860680	E072	-9873
chr9	8860850	8860926	E072	-9627
chr9	8863124	8863382	E072	-7171
chr9	8863563	8863613	E072	-6940
chr9	8864009	8864567	E072	-5986
chr9	8867226	8867288	E072	-3265
chr9	8867299	8867478	E072	-3075
chr9	8869671	8869939	E072	-614
chr9	8869949	8870106	E072	-447
chr9	8870147	8870207	E072	-346
chr9	8870379	8870521	E072	-32
chr9	8870524	8870625	E072	0
chr9	8870648	8871153	E072	95
chr9	8871165	8871566	E072	612
chr9	8871591	8871671	E072	1038
chr9	8871970	8872098	E072	1417
chr9	8872115	8872362	E072	1562
chr9	8872430	8872497	E072	1877
chr9	8873062	8873137	E072	2509
chr9	8875811	8875917	E072	5258
chr9	8875941	8876039	E072	5388
chr9	8895072	8895603	E072	24519
chr9	8899422	8899776	E072	28869
chr9	8900911	8900962	E072	30358
chr9	8914931	8914981	E072	44378
chr9	8915006	8915046	E072	44453
chr9	8915188	8915238	E072	44635
chr9	8915619	8915669	E072	45066
chr9	8917454	8917563	E072	46901
chr9	8917992	8918042	E072	47439
chr9	8918187	8918237	E072	47634
chr9	8918303	8918368	E072	47750
chr9	8822983	8823075	E073	-47478
chr9	8823094	8823144	E073	-47409
chr9	8823362	8823465	E073	-47088
chr9	8823500	8823572	E073	-46981
chr9	8825686	8826092	E073	-44461
chr9	8826397	8826502	E073	-44051
chr9	8842826	8843252	E073	-27301
chr9	8846581	8846704	E073	-23849
chr9	8846892	8846957	E073	-23596
chr9	8859932	8860050	E073	-10503
chr9	8865670	8865801	E073	-4752
chr9	8870648	8871153	E073	95
chr9	8871165	8871566	E073	612
chr9	8871591	8871671	E073	1038
chr9	8871970	8872098	E073	1417
chr9	8872115	8872362	E073	1562
chr9	8872430	8872497	E073	1877
chr9	8872787	8872965	E073	2234
chr9	8873062	8873137	E073	2509
chr9	8873740	8873854	E073	3187
chr9	8821134	8821212	E074	-49341
chr9	8821273	8821313	E074	-49240
chr9	8821360	8821604	E074	-48949
chr9	8821681	8821721	E074	-48832
chr9	8821977	8822155	E074	-48398
chr9	8822406	8822513	E074	-48040
chr9	8822700	8822915	E074	-47638
chr9	8822983	8823075	E074	-47478
chr9	8823094	8823144	E074	-47409
chr9	8823362	8823465	E074	-47088
chr9	8823500	8823572	E074	-46981
chr9	8826397	8826502	E074	-44051
chr9	8829246	8829296	E074	-41257
chr9	8829307	8829367	E074	-41186
chr9	8831011	8831157	E074	-39396
chr9	8831361	8831411	E074	-39142
chr9	8831539	8831593	E074	-38960
chr9	8831762	8831856	E074	-38697
chr9	8831978	8832044	E074	-38509
chr9	8832857	8832926	E074	-37627
chr9	8833051	8833260	E074	-37293
chr9	8833268	8833375	E074	-37178
chr9	8834791	8835003	E074	-35550
chr9	8835108	8835556	E074	-34997
chr9	8840887	8841003	E074	-29550
chr9	8841025	8841075	E074	-29478
chr9	8841318	8841375	E074	-29178
chr9	8841414	8841518	E074	-29035
chr9	8842588	8842673	E074	-27880
chr9	8842716	8842787	E074	-27766
chr9	8842826	8843252	E074	-27301
chr9	8843425	8843475	E074	-27078
chr9	8843767	8843817	E074	-26736
chr9	8845044	8845124	E074	-25429
chr9	8845348	8845434	E074	-25119
chr9	8845444	8845605	E074	-24948
chr9	8845824	8846176	E074	-24377
chr9	8846581	8846704	E074	-23849
chr9	8846892	8846957	E074	-23596
chr9	8847073	8847140	E074	-23413
chr9	8847437	8847588	E074	-22965
chr9	8847646	8847811	E074	-22742
chr9	8847844	8848164	E074	-22389
chr9	8850151	8850201	E074	-20352
chr9	8850797	8851201	E074	-19352
chr9	8851436	8851576	E074	-18977
chr9	8852087	8852176	E074	-18377
chr9	8852709	8852749	E074	-17804
chr9	8852780	8852830	E074	-17723
chr9	8852877	8852996	E074	-17557
chr9	8853216	8853351	E074	-17202
chr9	8853428	8853647	E074	-16906
chr9	8853671	8853924	E074	-16629
chr9	8859932	8860050	E074	-10503
chr9	8860178	8860477	E074	-10076
chr9	8860579	8860680	E074	-9873
chr9	8860850	8860926	E074	-9627
chr9	8862499	8862549	E074	-8004
chr9	8862617	8862674	E074	-7879
chr9	8862712	8862772	E074	-7781
chr9	8863124	8863382	E074	-7171
chr9	8863563	8863613	E074	-6940
chr9	8865670	8865801	E074	-4752
chr9	8866498	8866716	E074	-3837
chr9	8866893	8866966	E074	-3587
chr9	8867067	8867147	E074	-3406
chr9	8867226	8867288	E074	-3265
chr9	8867299	8867478	E074	-3075
chr9	8868057	8868107	E074	-2446
chr9	8868545	8868630	E074	-1923
chr9	8868699	8869010	E074	-1543
chr9	8869233	8869287	E074	-1266
chr9	8869350	8869427	E074	-1126
chr9	8869503	8869632	E074	-921
chr9	8869671	8869939	E074	-614
chr9	8869949	8870106	E074	-447
chr9	8870147	8870207	E074	-346
chr9	8870379	8870521	E074	-32
chr9	8870524	8870625	E074	0
chr9	8871591	8871671	E074	1038
chr9	8871970	8872098	E074	1417
chr9	8872115	8872362	E074	1562
chr9	8872430	8872497	E074	1877
chr9	8872787	8872965	E074	2234
chr9	8873062	8873137	E074	2509
chr9	8874405	8874464	E074	3852
chr9	8874691	8874865	E074	4138
chr9	8875686	8875740	E074	5133
chr9	8875811	8875917	E074	5258
chr9	8875941	8876039	E074	5388
chr9	8876392	8876604	E074	5839
chr9	8877798	8877874	E074	7245
chr9	8877958	8878008	E074	7405
chr9	8878199	8878299	E074	7646
chr9	8878362	8878430	E074	7809
chr9	8879121	8879172	E074	8568
chr9	8879406	8879494	E074	8853
chr9	8879724	8879774	E074	9171
chr9	8879783	8879823	E074	9230
chr9	8892092	8892290	E074	21539
chr9	8894945	8895017	E074	24392
chr9	8895072	8895603	E074	24519
chr9	8899422	8899776	E074	28869
chr9	8901017	8901208	E074	30464
chr9	8901233	8901686	E074	30680
chr9	8901753	8901961	E074	31200
chr9	8914931	8914981	E074	44378
chr9	8915006	8915046	E074	44453
chr9	8915188	8915238	E074	44635
chr9	8915619	8915669	E074	45066
chr9	8917992	8918042	E074	47439
chr9	8918187	8918237	E074	47634
chr9	8829246	8829296	E081	-41257
chr9	8829307	8829367	E081	-41186
chr9	8843425	8843475	E081	-27078
chr9	8845044	8845124	E081	-25429
chr9	8845348	8845434	E081	-25119
chr9	8845444	8845605	E081	-24948
chr9	8845617	8845771	E081	-24782
chr9	8845824	8846176	E081	-24377
chr9	8846581	8846704	E081	-23849
chr9	8846892	8846957	E081	-23596
chr9	8847073	8847140	E081	-23413
chr9	8847646	8847811	E081	-22742
chr9	8847844	8848164	E081	-22389
chr9	8850797	8851201	E081	-19352
chr9	8851436	8851576	E081	-18977
chr9	8852087	8852176	E081	-18377
chr9	8852877	8852996	E081	-17557
chr9	8853216	8853351	E081	-17202
chr9	8859932	8860050	E081	-10503
chr9	8860178	8860477	E081	-10076
chr9	8860579	8860680	E081	-9873
chr9	8860850	8860926	E081	-9627
chr9	8905627	8905717	E081	35074
chr9	8822700	8822915	E082	-47638
chr9	8822983	8823075	E082	-47478
chr9	8823094	8823144	E082	-47409
chr9	8823362	8823465	E082	-47088
chr9	8845044	8845124	E082	-25429
chr9	8845348	8845434	E082	-25119
chr9	8845444	8845605	E082	-24948
chr9	8845617	8845771	E082	-24782
chr9	8845824	8846176	E082	-24377
chr9	8846581	8846704	E082	-23849
chr9	8846892	8846957	E082	-23596
chr9	8850797	8851201	E082	-19352
chr9	8859932	8860050	E082	-10503
chr9	8860178	8860477	E082	-10076
chr9	8860579	8860680	E082	-9873
chr9	8860850	8860926	E082	-9627

Promoter Annotation (GRCh37.p13)

Chromosome	Start	End	Region	Distance(-/+:Up/Downstream)
chr9	8854546	8854984	E067	-15569
chr9	8855058	8855334	E067	-15219
chr9	8855335	8855453	E067	-15100
chr9	8855484	8855602	E067	-14951
chr9	8855741	8856158	E067	-14395
chr9	8856183	8859723	E067	-10830
chr9	8854231	8854281	E068	-16272
chr9	8854546	8854984	E068	-15569
chr9	8855058	8855334	E068	-15219
chr9	8855335	8855453	E068	-15100
chr9	8855484	8855602	E068	-14951
chr9	8855741	8856158	E068	-14395
chr9	8856183	8859723	E068	-10830
chr9	8895604	8896180	E068	25051
chr9	8854231	8854281	E069	-16272
chr9	8854546	8854984	E069	-15569
chr9	8855058	8855334	E069	-15219
chr9	8855335	8855453	E069	-15100
chr9	8855484	8855602	E069	-14951
chr9	8855741	8856158	E069	-14395
chr9	8856183	8859723	E069	-10830
chr9	8854231	8854281	E070	-16272
chr9	8854546	8854984	E070	-15569
chr9	8855058	8855334	E070	-15219
chr9	8855335	8855453	E070	-15100
chr9	8855484	8855602	E070	-14951
chr9	8855741	8856158	E070	-14395
chr9	8856183	8859723	E070	-10830
chr9	8854546	8854984	E071	-15569
chr9	8855058	8855334	E071	-15219
chr9	8855335	8855453	E071	-15100
chr9	8855484	8855602	E071	-14951
chr9	8855741	8856158	E071	-14395
chr9	8856183	8859723	E071	-10830
chr9	8895604	8896180	E071	25051
chr9	8854231	8854281	E072	-16272
chr9	8854546	8854984	E072	-15569
chr9	8855058	8855334	E072	-15219
chr9	8855335	8855453	E072	-15100
chr9	8855484	8855602	E072	-14951
chr9	8855741	8856158	E072	-14395
chr9	8856183	8859723	E072	-10830
chr9	8895604	8896180	E072	25051
chr9	8854546	8854984	E073	-15569
chr9	8855058	8855334	E073	-15219
chr9	8855335	8855453	E073	-15100
chr9	8855484	8855602	E073	-14951
chr9	8855741	8856158	E073	-14395
chr9	8856183	8859723	E073	-10830
chr9	8854231	8854281	E074	-16272
chr9	8854546	8854984	E074	-15569
chr9	8855058	8855334	E074	-15219
chr9	8855335	8855453	E074	-15100
chr9	8855484	8855602	E074	-14951
chr9	8855741	8856158	E074	-14395
chr9	8856183	8859723	E074	-10830
chr9	8854546	8854984	E081	-15569
chr9	8855058	8855334	E081	-15219
chr9	8855335	8855453	E081	-15100
chr9	8855484	8855602	E081	-14951
chr9	8855741	8856158	E081	-14395
chr9	8856183	8859723	E081	-10830
chr9	8854231	8854281	E082	-16272
chr9	8854546	8854984	E082	-15569
chr9	8855058	8855334	E082	-15219
chr9	8855335	8855453	E082	-15100
chr9	8855484	8855602	E082	-14951
chr9	8855741	8856158	E082	-14395
chr9	8856183	8859723	E082	-10830