| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 1 | NC_000001.11:g.177464440A>G |
| GRCh37.p13 chr 1 | NC_000001.10:g.177433576A>G |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | A=0.911 | G=0.089 |
| 1000Genomes | American | Sub | 694 | A=0.920 | G=0.080 |
| 1000Genomes | East Asian | Sub | 1008 | A=0.424 | G=0.576 |
| 1000Genomes | Europe | Sub | 1006 | A=0.986 | G=0.014 |
| 1000Genomes | Global | Study-wide | 5008 | A=0.804 | G=0.196 |
| 1000Genomes | South Asian | Sub | 978 | A=0.780 | G=0.220 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.996 | G=0.004 |
| The Genome Aggregation Database | African | Sub | 8726 | A=0.918 | G=0.082 |
| The Genome Aggregation Database | American | Sub | 836 | A=0.910 | G=0.090 |
| The Genome Aggregation Database | East Asian | Sub | 1582 | A=0.391 | G=0.609 |
| The Genome Aggregation Database | Europe | Sub | 18488 | A=0.975 | G=0.024 |
| The Genome Aggregation Database | Global | Study-wide | 29934 | A=0.926 | G=0.073 |
| The Genome Aggregation Database | Other | Sub | 302 | A=0.990 | G=0.010 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.940 | G=0.059 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.999 | G=0.001 |
| PMID | Title | Author | Journal |
|---|
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs12026256 | 1.67E-11 | alcohol consumption | pha001398 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr1 | 177393833 | 177394235 | E068 | -39341 |
| chr1 | 177445864 | 177446122 | E070 | 12288 |
| chr1 | 177449969 | 177450441 | E070 | 16393 |
| chr1 | 177393833 | 177394235 | E072 | -39341 |
| chr1 | 177394538 | 177394618 | E081 | -38958 |
| chr1 | 177394717 | 177394800 | E081 | -38776 |
| chr1 | 177433598 | 177433772 | E081 | 22 |
| chr1 | 177445864 | 177446122 | E081 | 12288 |
| chr1 | 177457999 | 177458054 | E081 | 24423 |
| chr1 | 177458753 | 177459691 | E081 | 25177 |
| chr1 | 177433927 | 177434107 | E082 | 351 |
| chr1 | 177445864 | 177446122 | E082 | 12288 |
| chr1 | 177449969 | 177450441 | E082 | 16393 |