| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 1 | NC_000001.11:g.8940161A>G |
| GRCh37.p13 chr 1 | NC_000001.10:g.9000220A>G |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | A=0.856 | G=0.144 |
| 1000Genomes | American | Sub | 694 | A=0.950 | G=0.050 |
| 1000Genomes | East Asian | Sub | 1008 | A=0.919 | G=0.081 |
| 1000Genomes | Europe | Sub | 1006 | A=0.935 | G=0.065 |
| 1000Genomes | Global | Study-wide | 5008 | A=0.909 | G=0.091 |
| 1000Genomes | South Asian | Sub | 978 | A=0.910 | G=0.090 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.941 | G=0.059 |
| The Genome Aggregation Database | African | Sub | 8712 | A=0.859 | G=0.141 |
| The Genome Aggregation Database | American | Sub | 838 | A=0.960 | G=0.040 |
| The Genome Aggregation Database | East Asian | Sub | 1620 | A=0.887 | G=0.113 |
| The Genome Aggregation Database | Europe | Sub | 18486 | A=0.938 | G=0.061 |
| The Genome Aggregation Database | Global | Study-wide | 29958 | A=0.912 | G=0.087 |
| The Genome Aggregation Database | Other | Sub | 302 | A=0.910 | G=0.090 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.904 | G=0.095 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.933 | G=0.067 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 20201924 | Genome-wide association study of alcohol dependence implicates a region on chromosome 11. | Edenberg HJ | Alcohol Clin Exp Res |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs12091891 | 0.000856 | alcohol dependence | 20201924 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr1 | 8963633 | 8964474 | E067 | -35746 |
| chr1 | 8978247 | 8978601 | E067 | -21619 |
| chr1 | 8978746 | 8978832 | E067 | -21388 |
| chr1 | 8978992 | 8979032 | E067 | -21188 |
| chr1 | 8998436 | 8998652 | E067 | -1568 |
| chr1 | 8998766 | 8998865 | E067 | -1355 |
| chr1 | 9003213 | 9003267 | E067 | 2993 |
| chr1 | 9003313 | 9004063 | E067 | 3093 |
| chr1 | 9004149 | 9004336 | E067 | 3929 |
| chr1 | 9004764 | 9005119 | E067 | 4544 |
| chr1 | 9007391 | 9007485 | E067 | 7171 |
| chr1 | 9007572 | 9007653 | E067 | 7352 |
| chr1 | 9007692 | 9007732 | E067 | 7472 |
| chr1 | 9007782 | 9007883 | E067 | 7562 |
| chr1 | 9046006 | 9046063 | E067 | 45786 |
| chr1 | 9046080 | 9046588 | E067 | 45860 |
| chr1 | 9046779 | 9046906 | E067 | 46559 |
| chr1 | 9046969 | 9047167 | E067 | 46749 |
| chr1 | 9047848 | 9048477 | E067 | 47628 |
| chr1 | 9001442 | 9001502 | E068 | 1222 |
| chr1 | 9001795 | 9001902 | E068 | 1575 |
| chr1 | 9001991 | 9002158 | E068 | 1771 |
| chr1 | 9002202 | 9002324 | E068 | 1982 |
| chr1 | 9003213 | 9003267 | E068 | 2993 |
| chr1 | 9003313 | 9004063 | E068 | 3093 |
| chr1 | 9004149 | 9004336 | E068 | 3929 |
| chr1 | 9007142 | 9007225 | E068 | 6922 |
| chr1 | 9007391 | 9007485 | E068 | 7171 |
| chr1 | 9007572 | 9007653 | E068 | 7352 |
| chr1 | 9007692 | 9007732 | E068 | 7472 |
| chr1 | 9007782 | 9007883 | E068 | 7562 |
| chr1 | 9011364 | 9011608 | E068 | 11144 |
| chr1 | 9046779 | 9046906 | E068 | 46559 |
| chr1 | 9046969 | 9047167 | E068 | 46749 |
| chr1 | 9047848 | 9048477 | E068 | 47628 |
| chr1 | 8950738 | 8950806 | E069 | -49414 |
| chr1 | 9001299 | 9001349 | E069 | 1079 |
| chr1 | 9001442 | 9001502 | E069 | 1222 |
| chr1 | 9001795 | 9001902 | E069 | 1575 |
| chr1 | 9001991 | 9002158 | E069 | 1771 |
| chr1 | 9002202 | 9002324 | E069 | 1982 |
| chr1 | 9003213 | 9003267 | E069 | 2993 |
| chr1 | 9003313 | 9004063 | E069 | 3093 |
| chr1 | 9004149 | 9004336 | E069 | 3929 |
| chr1 | 9004764 | 9005119 | E069 | 4544 |
| chr1 | 9005974 | 9006073 | E069 | 5754 |
| chr1 | 9007391 | 9007485 | E069 | 7171 |
| chr1 | 9007572 | 9007653 | E069 | 7352 |
| chr1 | 9007692 | 9007732 | E069 | 7472 |
| chr1 | 9007782 | 9007883 | E069 | 7562 |
| chr1 | 9046006 | 9046063 | E069 | 45786 |
| chr1 | 9046080 | 9046588 | E069 | 45860 |
| chr1 | 9046779 | 9046906 | E069 | 46559 |
| chr1 | 9046969 | 9047167 | E069 | 46749 |
| chr1 | 9047848 | 9048477 | E069 | 47628 |
| chr1 | 8974497 | 8975019 | E070 | -25201 |
| chr1 | 8975104 | 8975154 | E070 | -25066 |
| chr1 | 8975196 | 8975264 | E070 | -24956 |
| chr1 | 8975382 | 8975463 | E070 | -24757 |
| chr1 | 8975513 | 8975817 | E070 | -24403 |
| chr1 | 8976008 | 8976058 | E070 | -24162 |
| chr1 | 8976096 | 8976146 | E070 | -24074 |
| chr1 | 8998436 | 8998652 | E070 | -1568 |
| chr1 | 8998766 | 8998865 | E070 | -1355 |
| chr1 | 8998954 | 8999454 | E070 | -766 |
| chr1 | 9004149 | 9004336 | E070 | 3929 |
| chr1 | 8997871 | 8998064 | E071 | -2156 |
| chr1 | 9001299 | 9001349 | E071 | 1079 |
| chr1 | 9001442 | 9001502 | E071 | 1222 |
| chr1 | 9001795 | 9001902 | E071 | 1575 |
| chr1 | 9001991 | 9002158 | E071 | 1771 |
| chr1 | 9002202 | 9002324 | E071 | 1982 |
| chr1 | 9003213 | 9003267 | E071 | 2993 |
| chr1 | 9003313 | 9004063 | E071 | 3093 |
| chr1 | 9004149 | 9004336 | E071 | 3929 |
| chr1 | 9004764 | 9005119 | E071 | 4544 |
| chr1 | 9005974 | 9006073 | E071 | 5754 |
| chr1 | 9006388 | 9006443 | E071 | 6168 |
| chr1 | 9006491 | 9006540 | E071 | 6271 |
| chr1 | 9006660 | 9006836 | E071 | 6440 |
| chr1 | 9006921 | 9006981 | E071 | 6701 |
| chr1 | 9007142 | 9007225 | E071 | 6922 |
| chr1 | 9007391 | 9007485 | E071 | 7171 |
| chr1 | 9007572 | 9007653 | E071 | 7352 |
| chr1 | 9007692 | 9007732 | E071 | 7472 |
| chr1 | 9007782 | 9007883 | E071 | 7562 |
| chr1 | 9046006 | 9046063 | E071 | 45786 |
| chr1 | 9046080 | 9046588 | E071 | 45860 |
| chr1 | 9046779 | 9046906 | E071 | 46559 |
| chr1 | 9046969 | 9047167 | E071 | 46749 |
| chr1 | 9047848 | 9048477 | E071 | 47628 |
| chr1 | 8978247 | 8978601 | E072 | -21619 |
| chr1 | 8978746 | 8978832 | E072 | -21388 |
| chr1 | 8998234 | 8998286 | E072 | -1934 |
| chr1 | 9001442 | 9001502 | E072 | 1222 |
| chr1 | 9001795 | 9001902 | E072 | 1575 |
| chr1 | 9001991 | 9002158 | E072 | 1771 |
| chr1 | 9002202 | 9002324 | E072 | 1982 |
| chr1 | 9003213 | 9003267 | E072 | 2993 |
| chr1 | 9003313 | 9004063 | E072 | 3093 |
| chr1 | 9004149 | 9004336 | E072 | 3929 |
| chr1 | 9011364 | 9011608 | E072 | 11144 |
| chr1 | 9015498 | 9015654 | E072 | 15278 |
| chr1 | 9015686 | 9015835 | E072 | 15466 |
| chr1 | 9046080 | 9046588 | E072 | 45860 |
| chr1 | 9046779 | 9046906 | E072 | 46559 |
| chr1 | 9046969 | 9047167 | E072 | 46749 |
| chr1 | 9047848 | 9048477 | E072 | 47628 |
| chr1 | 8963633 | 8964474 | E073 | -35746 |
| chr1 | 8978247 | 8978601 | E073 | -21619 |
| chr1 | 8978746 | 8978832 | E073 | -21388 |
| chr1 | 8978992 | 8979032 | E073 | -21188 |
| chr1 | 9003213 | 9003267 | E073 | 2993 |
| chr1 | 9003313 | 9004063 | E073 | 3093 |
| chr1 | 9004764 | 9005119 | E073 | 4544 |
| chr1 | 9009680 | 9009799 | E073 | 9460 |
| chr1 | 9046080 | 9046588 | E073 | 45860 |
| chr1 | 9046779 | 9046906 | E073 | 46559 |
| chr1 | 9046969 | 9047167 | E073 | 46749 |
| chr1 | 9047848 | 9048477 | E073 | 47628 |
| chr1 | 8978247 | 8978601 | E074 | -21619 |
| chr1 | 8978746 | 8978832 | E074 | -21388 |
| chr1 | 8978992 | 8979032 | E074 | -21188 |
| chr1 | 8997871 | 8998064 | E074 | -2156 |
| chr1 | 8998234 | 8998286 | E074 | -1934 |
| chr1 | 9003213 | 9003267 | E074 | 2993 |
| chr1 | 9003313 | 9004063 | E074 | 3093 |
| chr1 | 9004149 | 9004336 | E074 | 3929 |
| chr1 | 9007391 | 9007485 | E074 | 7171 |
| chr1 | 9007572 | 9007653 | E074 | 7352 |
| chr1 | 9007692 | 9007732 | E074 | 7472 |
| chr1 | 9007782 | 9007883 | E074 | 7562 |
| chr1 | 9015498 | 9015654 | E074 | 15278 |
| chr1 | 9015686 | 9015835 | E074 | 15466 |
| chr1 | 9015990 | 9016040 | E074 | 15770 |
| chr1 | 9046006 | 9046063 | E074 | 45786 |
| chr1 | 9046080 | 9046588 | E074 | 45860 |
| chr1 | 9046779 | 9046906 | E074 | 46559 |
| chr1 | 9046969 | 9047167 | E074 | 46749 |
| chr1 | 9047848 | 9048477 | E074 | 47628 |
| chr1 | 8975104 | 8975154 | E081 | -25066 |
| chr1 | 8975196 | 8975264 | E081 | -24956 |
| chr1 | 8975382 | 8975463 | E081 | -24757 |
| chr1 | 8975513 | 8975817 | E081 | -24403 |
| chr1 | 8985576 | 8985833 | E081 | -14387 |
| chr1 | 8989892 | 8989977 | E081 | -10243 |
| chr1 | 9046006 | 9046063 | E081 | 45786 |
| chr1 | 9046080 | 9046588 | E081 | 45860 |
| chr1 | 9046779 | 9046906 | E081 | 46559 |
| chr1 | 9046969 | 9047167 | E081 | 46749 |
| chr1 | 8985576 | 8985833 | E082 | -14387 |
| chr1 | 9003213 | 9003267 | E082 | 2993 |
| chr1 | 9003313 | 9004063 | E082 | 3093 |
| chr1 | 9004149 | 9004336 | E082 | 3929 |