| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 1 | NC_000001.11:g.91654580G>A |
| GRCh37.p13 chr 1 | NC_000001.10:g.92120137G>A |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | G=0.812 | A=0.188 |
| 1000Genomes | American | Sub | 694 | G=0.330 | A=0.670 |
| 1000Genomes | East Asian | Sub | 1008 | G=0.444 | A=0.556 |
| 1000Genomes | Europe | Sub | 1006 | G=0.335 | A=0.665 |
| 1000Genomes | Global | Study-wide | 5008 | G=0.450 | A=0.550 |
| 1000Genomes | South Asian | Sub | 978 | G=0.170 | A=0.830 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.324 | A=0.676 |
| The Genome Aggregation Database | African | Sub | 8638 | G=0.728 | A=0.272 |
| The Genome Aggregation Database | American | Sub | 832 | G=0.300 | A=0.700 |
| The Genome Aggregation Database | East Asian | Sub | 1606 | G=0.427 | A=0.573 |
| The Genome Aggregation Database | Europe | Sub | 18426 | G=0.313 | A=0.686 |
| The Genome Aggregation Database | Global | Study-wide | 29804 | G=0.440 | A=0.559 |
| The Genome Aggregation Database | Other | Sub | 302 | G=0.460 | A=0.540 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.512 | A=0.487 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.318 | A=0.682 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 23743675 | A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks. | Kapoor M | Hum Genet |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs12410523 | 8.92E-05 | alcohol consumption | 23743675 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr1 | 92087389 | 92088838 | E067 | -31299 |
| chr1 | 92087389 | 92088838 | E068 | -31299 |
| chr1 | 92087389 | 92088838 | E069 | -31299 |
| chr1 | 92087389 | 92088838 | E071 | -31299 |
| chr1 | 92087389 | 92088838 | E072 | -31299 |
| chr1 | 92165149 | 92165515 | E072 | 45012 |
| chr1 | 92165590 | 92165710 | E072 | 45453 |
| chr1 | 92165755 | 92165809 | E072 | 45618 |
| chr1 | 92087389 | 92088838 | E073 | -31299 |
| chr1 | 92087389 | 92088838 | E074 | -31299 |
| chr1 | 92146216 | 92146660 | E081 | 26079 |