SNP Detail Info-rs12536529

Molecule type	Change	Amino acid[Codon]	SO Term
AKAP9 transcript variant 2	NM_005751.4:c.	N/A	Intron Variant
AKAP9 transcript variant 3	NM_147185.2:c.	N/A	Intron Variant
AKAP9 transcript variant X1	XM_017011642.1:c.	N/A	Intron Variant
AKAP9 transcript variant X2	XM_017011643.1:c.	N/A	Intron Variant
AKAP9 transcript variant X3	XM_017011644.1:c.	N/A	Intron Variant
AKAP9 transcript variant X4	XM_017011645.1:c.	N/A	Intron Variant
AKAP9 transcript variant X5	XM_017011646.1:c.	N/A	Intron Variant
AKAP9 transcript variant X6	XM_017011647.1:c.	N/A	Intron Variant
AKAP9 transcript variant X7	XM_017011648.1:c.	N/A	Intron Variant
AKAP9 transcript variant X8	XM_017011649.1:c.	N/A	Intron Variant
AKAP9 transcript variant X9	XM_017011650.1:c.	N/A	Intron Variant
AKAP9 transcript variant X10	XM_017011651.1:c.	N/A	Intron Variant
AKAP9 transcript variant X11	XM_017011652.1:c.	N/A	Intron Variant
AKAP9 transcript variant X12	XM_017011653.1:c.	N/A	Intron Variant
AKAP9 transcript variant X13	XM_017011654.1:c.	N/A	Intron Variant
AKAP9 transcript variant X14	XM_017011655.1:c.	N/A	Intron Variant
AKAP9 transcript variant X15	XM_017011656.1:c.	N/A	Intron Variant
AKAP9 transcript variant X16	XM_017011657.1:c.	N/A	Intron Variant
AKAP9 transcript variant X17	XM_017011658.1:c.	N/A	Genic Upstream Transcript Variant
AKAP9 transcript variant X18	XM_017011659.1:c.	N/A	Genic Upstream Transcript Variant
AKAP9 transcript variant X19	XM_017011660.1:c.	N/A	Genic Upstream Transcript Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.535	G=0.465
1000Genomes	American	Sub	694	A=0.640	G=0.360
1000Genomes	East Asian	Sub	1008	A=0.837	G=0.163
1000Genomes	Europe	Sub	1006	A=0.614	G=0.386
1000Genomes	Global	Study-wide	5008	A=0.638	G=0.362
1000Genomes	South Asian	Sub	978	A=0.590	G=0.410
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.608	G=0.392
The Genome Aggregation Database	African	Sub	8704	A=0.536	G=0.464
The Genome Aggregation Database	American	Sub	832	A=0.680	G=0.320
The Genome Aggregation Database	East Asian	Sub	1610	A=0.825	G=0.175
The Genome Aggregation Database	Europe	Sub	18420	A=0.623	G=0.376
The Genome Aggregation Database	Global	Study-wide	29868	A=0.608	G=0.391
The Genome Aggregation Database	Other	Sub	302	A=0.470	G=0.530
Trans-Omics for Precision Medicine	Global	Study-wide	29118	A=0.580	G=0.419
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.622	G=0.378

PMID	Title	Author	Journal
21314694	Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.	Kendler KS	Alcohol Clin Exp Res

SNP ID	p-value	Traits	Study
rs12536529	0.000154	alcohol dependence	21314694

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
Chr7:91684086	AKAP9	ENSG00000127914.12	A>G	4.3498e-3	113905	Cerebellum

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr7	91686649	91687113	E068	2563
chr7	91687485	91687627	E068	3399
chr7	91690548	91690754	E068	6462

rs12536529