rs13035632

Homo sapiens
T>C
None
Check p-value
SNV (Single Nucleotide Variation)
C=0155 (4654/29954,GnomAD)
C=0125 (3660/29118,TOPMED)
C=0111 (554/5008,1000G)
C=0213 (819/3854,ALSPAC)
C=0212 (786/3708,TWINSUK)
chr2:158893786 (GRCh38.p7) (2q24.1)
AD
GWASdb2
1   publication(s)
See rs on genome
7 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 2NC_000002.12:g.158893786T>C
GRCh37.p13 chr 2NC_000002.11:g.159750298T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.986C=0.014
1000GenomesAmericanSub694T=0.900C=0.100
1000GenomesEast AsianSub1008T=0.953C=0.047
1000GenomesEuropeSub1006T=0.773C=0.227
1000GenomesGlobalStudy-wide5008T=0.889C=0.111
1000GenomesSouth AsianSub978T=0.800C=0.200
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.787C=0.213
The Genome Aggregation DatabaseAfricanSub8722T=0.959C=0.041
The Genome Aggregation DatabaseAmericanSub838T=0.890C=0.110
The Genome Aggregation DatabaseEast AsianSub1622T=0.976C=0.024
The Genome Aggregation DatabaseEuropeSub18470T=0.776C=0.223
The Genome Aggregation DatabaseGlobalStudy-wide29954T=0.844C=0.155
The Genome Aggregation DatabaseOtherSub302T=0.890C=0.110
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.874C=0.125
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.788C=0.212
PMID Title Author Journal
23953852Genome-wide association studies of maximum number of drinks.Pan YJ Psychiatr Res

P-Value

SNP ID p-value Traits Study
rs130356326.11E-06alcohol consumption23953852

eQTL of rs13035632 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs13035632 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr2159775021159775221E06724723
chr2159775021159775221E07024723
chr2159749323159749992E071-306
chr2159749323159749992E072-306
chr2159749323159749992E073-306
chr2159749323159749992E081-306
chr2159750081159750347E0810