rs13150562

Homo sapiens
T>C
NDST4 : Intron Variant
Check p-value
SNV (Single Nucleotide Variation)
None (
chr4:115036437 (GRCh38.p7) (4q26)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 4NC_000004.12:g.115036437T>C
GRCh37.p13 chr 4NC_000004.11:g.115957593T>C

Gene: NDST4, N-deacetylase/N-sulfotransferase 4(minus strand)

Molecule type Change Amino acid[Codon] SO Term
NDST4 transcriptNM_022569.2:c.N/AIntron Variant
NDST4 transcript variant X1XM_017008545.1:c.N/AIntron Variant
NDST4 transcript variant X2XM_017008546.1:c.N/AIntron Variant

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
PMID Title Author Journal
19581569Genome-wide association study of alcohol dependence.Treutlein JArch Gen Psychiatry

P-Value

SNP ID p-value Traits Study
rs131505627E-06alcohol dependence19581569

eQTL of rs13150562 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs13150562 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.