rs13234350

Homo sapiens
T>C
None
Check p-value
SNV (Single Nucleotide Variation)
C=0258 (7742/29930,GnomAD)
C=0235 (6844/29118,TOPMED)
C=0290 (1454/5008,1000G)
C=0332 (1279/3854,ALSPAC)
C=0327 (1211/3708,TWINSUK)
chr7:35406974 (GRCh38.p7) (7p14.2)
AD
GWASdb2
1   publication(s)
See rs on genome
1 Enhancer around
3 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 7NC_000007.14:g.35406974T>C
GRCh37.p13 chr 7NC_000007.13:g.35446584T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.921C=0.079
1000GenomesAmericanSub694T=0.640C=0.360
1000GenomesEast AsianSub1008T=0.668C=0.332
1000GenomesEuropeSub1006T=0.660C=0.340
1000GenomesGlobalStudy-wide5008T=0.710C=0.290
1000GenomesSouth AsianSub978T=0.570C=0.430
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.668C=0.332
The Genome Aggregation DatabaseAfricanSub8728T=0.892C=0.108
The Genome Aggregation DatabaseAmericanSub832T=0.610C=0.390
The Genome Aggregation DatabaseEast AsianSub1616T=0.700C=0.300
The Genome Aggregation DatabaseEuropeSub18452T=0.681C=0.319
The Genome Aggregation DatabaseGlobalStudy-wide29930T=0.741C=0.258
The Genome Aggregation DatabaseOtherSub302T=0.670C=0.330
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.765C=0.235
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.673C=0.327
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs132343500.000184alcohol consumption23743675

eQTL of rs13234350 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs13234350 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr73548969335491153E08243109

Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr73549394535494430E07047361
chr73549444135494565E07347857
chr73549463235494938E08248048