rs13250895

Homo sapiens
G>C
None
Check p-value
SNV (Single Nucleotide Variation)
C=0127 (3798/29870,GnomAD)
C=0140 (4095/29118,TOPMED)
C=0174 (871/5008,1000G)
C=0058 (224/3854,ALSPAC)
C=0047 (176/3708,TWINSUK)
chr8:100802097 (GRCh38.p7) (8q22.3)
AD
GWASdb2
1   publication(s)
See rs on genome
20 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 8NC_000008.11:g.100802097G>C
GRCh37.p13 chr 8NC_000008.10:g.101814325G>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.756C=0.244
1000GenomesAmericanSub694G=0.800C=0.200
1000GenomesEast AsianSub1008G=0.712C=0.288
1000GenomesEuropeSub1006G=0.948C=0.052
1000GenomesGlobalStudy-wide5008G=0.826C=0.174
1000GenomesSouth AsianSub978G=0.930C=0.070
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.942C=0.058
The Genome Aggregation DatabaseAfricanSub8692G=0.763C=0.237
The Genome Aggregation DatabaseAmericanSub832G=0.800C=0.200
The Genome Aggregation DatabaseEast AsianSub1604G=0.686C=0.314
The Genome Aggregation DatabaseEuropeSub18440G=0.942C=0.057
The Genome Aggregation DatabaseGlobalStudy-wide29870G=0.872C=0.127
The Genome Aggregation DatabaseOtherSub302G=0.950C=0.050
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.859C=0.140
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.953C=0.047
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs132508959.1E-05alcohol consumption23743675

eQTL of rs13250895 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs13250895 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr8101773554101775046E068-39279
chr8101847470101848214E06833145
chr8101764400101764498E071-49827
chr8101764560101764751E071-49574
chr8101764770101764823E071-49502
chr8101803597101803661E072-10664
chr8101803758101804338E074-9987
chr8101804391101804510E074-9815
chr8101847470101848214E07433145
chr8101848259101848339E07433934
chr8101859230101859295E07444905
chr8101775773101775823E081-38502
chr8101775832101775882E081-38443
chr8101775951101776079E081-38246
chr8101803597101803661E081-10664
chr8101803758101804338E081-9987
chr8101804391101804510E081-9815
chr8101851627101851825E08137302
chr8101851845101851917E08137520
chr8101775334101775644E082-38681