| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 8 | NC_000008.11:g.131554907G>A |
| GRCh37.p13 chr 8 | NC_000008.10:g.132567154G>A |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | G=0.842 | A=0.158 |
| 1000Genomes | American | Sub | 694 | G=0.870 | A=0.130 |
| 1000Genomes | East Asian | Sub | 1008 | G=0.782 | A=0.218 |
| 1000Genomes | Europe | Sub | 1006 | G=0.707 | A=0.293 |
| 1000Genomes | Global | Study-wide | 5008 | G=0.789 | A=0.211 |
| 1000Genomes | South Asian | Sub | 978 | G=0.750 | A=0.250 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.675 | A=0.325 |
| The Genome Aggregation Database | African | Sub | 8706 | G=0.837 | A=0.163 |
| The Genome Aggregation Database | American | Sub | 836 | G=0.860 | A=0.140 |
| The Genome Aggregation Database | East Asian | Sub | 1604 | G=0.807 | A=0.193 |
| The Genome Aggregation Database | Europe | Sub | 18442 | G=0.670 | A=0.329 |
| The Genome Aggregation Database | Global | Study-wide | 29890 | G=0.732 | A=0.267 |
| The Genome Aggregation Database | Other | Sub | 302 | G=0.760 | A=0.240 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.775 | A=0.224 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.678 | A=0.322 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 20201924 | Genome-wide association study of alcohol dependence implicates a region on chromosome 11. | Edenberg HJ | Alcohol Clin Exp Res |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs13275290 | 0.000821 | alcohol dependence | 20201924 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr8 | 132545398 | 132545459 | E070 | -21695 |
| chr8 | 132546029 | 132546119 | E070 | -21035 |
| chr8 | 132546174 | 132546522 | E070 | -20632 |
| chr8 | 132546526 | 132546854 | E070 | -20300 |
| chr8 | 132547160 | 132547263 | E070 | -19891 |
| chr8 | 132547465 | 132547518 | E070 | -19636 |
| chr8 | 132546174 | 132546522 | E081 | -20632 |
| chr8 | 132546526 | 132546854 | E081 | -20300 |
| chr8 | 132546174 | 132546522 | E082 | -20632 |