rs13276772

Homo sapiens
T>C
None
Check p-value
SNV (Single Nucleotide Variation)
C=0127 (3826/29916,GnomAD)
C=0141 (4119/29118,TOPMED)
C=0175 (874/5008,1000G)
C=0060 (231/3854,ALSPAC)
C=0048 (179/3708,TWINSUK)
chr8:100800709 (GRCh38.p7) (8q22.3)
AD
GWASdb2
1   publication(s)
See rs on genome
20 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 8NC_000008.11:g.100800709T>C
GRCh37.p13 chr 8NC_000008.10:g.101812937T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.756C=0.244
1000GenomesAmericanSub694T=0.800C=0.200
1000GenomesEast AsianSub1008T=0.712C=0.288
1000GenomesEuropeSub1006T=0.948C=0.052
1000GenomesGlobalStudy-wide5008T=0.825C=0.175
1000GenomesSouth AsianSub978T=0.930C=0.070
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.940C=0.060
The Genome Aggregation DatabaseAfricanSub8682T=0.761C=0.239
The Genome Aggregation DatabaseAmericanSub838T=0.800C=0.200
The Genome Aggregation DatabaseEast AsianSub1616T=0.686C=0.314
The Genome Aggregation DatabaseEuropeSub18480T=0.942C=0.057
The Genome Aggregation DatabaseGlobalStudy-wide29916T=0.872C=0.127
The Genome Aggregation DatabaseOtherSub300T=0.950C=0.050
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.858C=0.141
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.952C=0.048
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs132767724.41E-05alcohol consumption23743675

eQTL of rs13276772 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs13276772 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr8101773554101775046E068-37891
chr8101847470101848214E06834533
chr8101764400101764498E071-48439
chr8101764560101764751E071-48186
chr8101764770101764823E071-48114
chr8101803597101803661E072-9276
chr8101803758101804338E074-8599
chr8101804391101804510E074-8427
chr8101847470101848214E07434533
chr8101848259101848339E07435322
chr8101859230101859295E07446293
chr8101775773101775823E081-37114
chr8101775832101775882E081-37055
chr8101775951101776079E081-36858
chr8101803597101803661E081-9276
chr8101803758101804338E081-8599
chr8101804391101804510E081-8427
chr8101851627101851825E08138690
chr8101851845101851917E08138908
chr8101775334101775644E082-37293