| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 9 | NC_000009.12:g.30460549A>G |
| GRCh37.p13 chr 9 | NC_000009.11:g.30460547A>G |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | A=0.520 | G=0.480 |
| 1000Genomes | American | Sub | 694 | A=0.140 | G=0.860 |
| 1000Genomes | East Asian | Sub | 1008 | A=0.152 | G=0.848 |
| 1000Genomes | Europe | Sub | 1006 | A=0.067 | G=0.933 |
| 1000Genomes | Global | Study-wide | 5008 | A=0.231 | G=0.769 |
| 1000Genomes | South Asian | Sub | 978 | A=0.160 | G=0.840 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.055 | G=0.945 |
| The Genome Aggregation Database | African | Sub | 8688 | A=0.436 | G=0.564 |
| The Genome Aggregation Database | American | Sub | 836 | A=0.130 | G=0.870 |
| The Genome Aggregation Database | East Asian | Sub | 1618 | A=0.124 | G=0.876 |
| The Genome Aggregation Database | Europe | Sub | 18460 | A=0.077 | G=0.922 |
| The Genome Aggregation Database | Global | Study-wide | 29902 | A=0.185 | G=0.814 |
| The Genome Aggregation Database | Other | Sub | 300 | A=0.080 | G=0.920 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.244 | G=0.755 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.058 | G=0.942 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 23743675 | A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks. | Kapoor M | Hum Genet |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs13290610 | 0.00022 | alcohol consumption | 23743675 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr9 | 30506855 | 30506905 | E067 | 46308 |
| chr9 | 30507574 | 30507699 | E067 | 47027 |
| chr9 | 30507794 | 30507950 | E067 | 47247 |
| chr9 | 30506855 | 30506905 | E069 | 46308 |
| chr9 | 30507574 | 30507699 | E069 | 47027 |
| chr9 | 30507794 | 30507950 | E069 | 47247 |
| chr9 | 30507574 | 30507699 | E071 | 47027 |
| chr9 | 30507794 | 30507950 | E071 | 47247 |
| chr9 | 30507794 | 30507950 | E072 | 47247 |