rs1412787

Homo sapiens
C>T
LOC105371609 : Non Coding Transcript Variant
Check p-value
SNV (Single Nucleotide Variation)
T=0263 (7867/29910,GnomAD)
T=0222 (6463/29118,TOPMED)
T=0272 (1362/5008,1000G)
T=0309 (1190/3854,ALSPAC)
T=0315 (1167/3708,TWINSUK)
chr1:170239583 (GRCh38.p7) (1q24.2)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 1NC_000001.11:g.170239583C>T
GRCh37.p13 chr 1NC_000001.10:g.170208724C>T

Gene: LOC105371609, uncharacterized LOC105371609(plus strand)

Molecule type Change Amino acid[Codon] SO Term
LOC105371609 transcript variant X1XR_001738284.1:n....XR_001738284.1:n.2625C>TC>TNon Coding Transcript Variant
LOC105371609 transcript variant X2XR_922266.2:n.262...XR_922266.2:n.2625C>TC>TNon Coding Transcript Variant
LOC105371609 transcript variant X3XR_001738285.1:n....XR_001738285.1:n.2453C>TC>TNon Coding Transcript Variant
LOC105371609 transcript variant X4XR_001738286.1:n....XR_001738286.1:n.2625C>TC>TNon Coding Transcript Variant
LOC105371609 transcript variant X5XR_001738287.1:n....XR_001738287.1:n.1670C>TC>TNon Coding Transcript Variant
LOC105371609 transcript variant X6XR_922269.2:n.262...XR_922269.2:n.2625C>TC>TNon Coding Transcript Variant
LOC105371609 transcript variant X7XR_001738288.1:n....XR_001738288.1:n.2625C>TC>TNon Coding Transcript Variant
LOC105371609 transcript variant X8XR_001738289.1:n....XR_001738289.1:n.3073C>TC>TNon Coding Transcript Variant
LOC105371609 transcript variant X10XR_001738290.1:n....XR_001738290.1:n.2615C>TC>TNon Coding Transcript Variant
LOC105371609 transcript variant X9XR_922275.2:n.N/AIntron Variant

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.