SNP Detail Info-rs155155

Organism: Homo sapiens

Alleles: A>G

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

G=0106 (3092/29138,GnomAD)
G=0130 (3786/29118,TOPMED)
G=0121 (605/5008,1000G)
G=0036 (137/3854,ALSPAC)
G=0031 (116/3708,TWINSUK)

Position: chr6:120169190 (GRCh38.p7) (6q22.31)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 6	NC_000006.12:g.120169190A>G
GRCh37.p13 chr 6	NC_000006.11:g.120490336A>G

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.745	G=0.255
1000Genomes	American	Sub	694	A=0.940	G=0.060
1000Genomes	East Asian	Sub	1008	A=0.899	G=0.101
1000Genomes	Europe	Sub	1006	A=0.950	G=0.050
1000Genomes	Global	Study-wide	5008	A=0.879	G=0.121
1000Genomes	South Asian	Sub	978	A=0.930	G=0.070
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.964	G=0.036
The Genome Aggregation Database	African	Sub	8564	A=0.770	G=0.230
The Genome Aggregation Database	American	Sub	804	A=0.930	G=0.070
The Genome Aggregation Database	East Asian	Sub	1528	A=0.912	G=0.088
The Genome Aggregation Database	Europe	Sub	17942	A=0.949	G=0.051
The Genome Aggregation Database	Global	Study-wide	29138	A=0.893	G=0.106
The Genome Aggregation Database	Other	Sub	300	A=0.950	G=0.050
Trans-Omics for Precision Medicine	Global	Study-wide	29118	A=0.870	G=0.130
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.969	G=0.031

PMID	Title	Author	Journal
20201924	Genome-wide association study of alcohol dependence implicates a region on chromosome 11.	Edenberg HJ	Alcohol Clin Exp Res

SNP ID	p-value	Traits	Study
rs155155	0.0000832	alcoholism	pha002891
rs155155	0.0000832	alcohol dependence	20201924

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs155155