| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 12 | NC_000012.12:g.75876976G>A |
| GRCh37.p13 chr 12 | NC_000012.11:g.76270756G>A |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | G=0.679 | A=0.321 |
| 1000Genomes | American | Sub | 694 | G=0.860 | A=0.140 |
| 1000Genomes | East Asian | Sub | 1008 | G=0.484 | A=0.516 |
| 1000Genomes | Europe | Sub | 1006 | G=0.756 | A=0.244 |
| 1000Genomes | Global | Study-wide | 5008 | G=0.663 | A=0.337 |
| 1000Genomes | South Asian | Sub | 978 | G=0.590 | A=0.410 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.731 | A=0.269 |
| The Genome Aggregation Database | African | Sub | 8716 | G=0.687 | A=0.313 |
| The Genome Aggregation Database | American | Sub | 836 | G=0.850 | A=0.150 |
| The Genome Aggregation Database | East Asian | Sub | 1616 | G=0.475 | A=0.525 |
| The Genome Aggregation Database | Europe | Sub | 18468 | G=0.743 | A=0.256 |
| The Genome Aggregation Database | Global | Study-wide | 29938 | G=0.716 | A=0.283 |
| The Genome Aggregation Database | Other | Sub | 302 | G=0.820 | A=0.180 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.729 | A=0.270 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.737 | A=0.263 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 21529783 | A quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications. | Heath AC | Biol Psychiatry |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs1623319 | 9.3E-05 | alcoholism (heaviness of drinking) | 21529783 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr12 | 76235456 | 76235663 | E067 | -35093 |
| chr12 | 76241881 | 76243190 | E067 | -27566 |
| chr12 | 76243240 | 76243290 | E067 | -27466 |
| chr12 | 76283474 | 76283662 | E067 | 12718 |
| chr12 | 76283673 | 76283794 | E067 | 12917 |
| chr12 | 76294137 | 76294430 | E067 | 23381 |
| chr12 | 76294466 | 76294749 | E067 | 23710 |
| chr12 | 76235456 | 76235663 | E068 | -35093 |
| chr12 | 76235854 | 76236222 | E068 | -34534 |
| chr12 | 76241881 | 76243190 | E068 | -27566 |
| chr12 | 76270514 | 76272644 | E068 | 0 |
| chr12 | 76277080 | 76277130 | E068 | 6324 |
| chr12 | 76283805 | 76283892 | E068 | 13049 |
| chr12 | 76284022 | 76284243 | E068 | 13266 |
| chr12 | 76302313 | 76304443 | E068 | 31557 |
| chr12 | 76235101 | 76235190 | E069 | -35566 |
| chr12 | 76235284 | 76235334 | E069 | -35422 |
| chr12 | 76236236 | 76236333 | E069 | -34423 |
| chr12 | 76241881 | 76243190 | E069 | -27566 |
| chr12 | 76283673 | 76283794 | E069 | 12917 |
| chr12 | 76283805 | 76283892 | E069 | 13049 |
| chr12 | 76231360 | 76232160 | E070 | -38596 |
| chr12 | 76234572 | 76234747 | E070 | -36009 |
| chr12 | 76235101 | 76235190 | E070 | -35566 |
| chr12 | 76235284 | 76235334 | E070 | -35422 |
| chr12 | 76235456 | 76235663 | E070 | -35093 |
| chr12 | 76235854 | 76236222 | E070 | -34534 |
| chr12 | 76236236 | 76236333 | E070 | -34423 |
| chr12 | 76236731 | 76236781 | E070 | -33975 |
| chr12 | 76236963 | 76237025 | E070 | -33731 |
| chr12 | 76237030 | 76237239 | E070 | -33517 |
| chr12 | 76237975 | 76239413 | E070 | -31343 |
| chr12 | 76239515 | 76239568 | E070 | -31188 |
| chr12 | 76239877 | 76239937 | E070 | -30819 |
| chr12 | 76240091 | 76240145 | E070 | -30611 |
| chr12 | 76240278 | 76240359 | E070 | -30397 |
| chr12 | 76241631 | 76241771 | E070 | -28985 |
| chr12 | 76241881 | 76243190 | E070 | -27566 |
| chr12 | 76243240 | 76243290 | E070 | -27466 |
| chr12 | 76243830 | 76243922 | E070 | -26834 |
| chr12 | 76244292 | 76244419 | E070 | -26337 |
| chr12 | 76244454 | 76245069 | E070 | -25687 |
| chr12 | 76245078 | 76245195 | E070 | -25561 |
| chr12 | 76245218 | 76245558 | E070 | -25198 |
| chr12 | 76246570 | 76247077 | E070 | -23679 |
| chr12 | 76247282 | 76247852 | E070 | -22904 |
| chr12 | 76262334 | 76262668 | E070 | -8088 |
| chr12 | 76270211 | 76270274 | E070 | -482 |
| chr12 | 76270514 | 76272644 | E070 | 0 |
| chr12 | 76276610 | 76276688 | E070 | 5854 |
| chr12 | 76277080 | 76277130 | E070 | 6324 |
| chr12 | 76277185 | 76277298 | E070 | 6429 |
| chr12 | 76283474 | 76283662 | E070 | 12718 |
| chr12 | 76283673 | 76283794 | E070 | 12917 |
| chr12 | 76283805 | 76283892 | E070 | 13049 |
| chr12 | 76284022 | 76284243 | E070 | 13266 |
| chr12 | 76284575 | 76284672 | E070 | 13819 |
| chr12 | 76293913 | 76294032 | E070 | 23157 |
| chr12 | 76294137 | 76294430 | E070 | 23381 |
| chr12 | 76294466 | 76294749 | E070 | 23710 |
| chr12 | 76294815 | 76294894 | E070 | 24059 |
| chr12 | 76294944 | 76295064 | E070 | 24188 |
| chr12 | 76235456 | 76235663 | E071 | -35093 |
| chr12 | 76235854 | 76236222 | E071 | -34534 |
| chr12 | 76236236 | 76236333 | E071 | -34423 |
| chr12 | 76241881 | 76243190 | E071 | -27566 |
| chr12 | 76243240 | 76243290 | E071 | -27466 |
| chr12 | 76283474 | 76283662 | E071 | 12718 |
| chr12 | 76283673 | 76283794 | E071 | 12917 |
| chr12 | 76283805 | 76283892 | E071 | 13049 |
| chr12 | 76284022 | 76284243 | E071 | 13266 |
| chr12 | 76284575 | 76284672 | E071 | 13819 |
| chr12 | 76284697 | 76284918 | E071 | 13941 |
| chr12 | 76302313 | 76304443 | E071 | 31557 |
| chr12 | 76235456 | 76235663 | E072 | -35093 |
| chr12 | 76241881 | 76243190 | E072 | -27566 |
| chr12 | 76281867 | 76281970 | E072 | 11111 |
| chr12 | 76283673 | 76283794 | E072 | 12917 |
| chr12 | 76235456 | 76235663 | E073 | -35093 |
| chr12 | 76235854 | 76236222 | E073 | -34534 |
| chr12 | 76241881 | 76243190 | E073 | -27566 |
| chr12 | 76235456 | 76235663 | E074 | -35093 |
| chr12 | 76235854 | 76236222 | E074 | -34534 |
| chr12 | 76236236 | 76236333 | E074 | -34423 |
| chr12 | 76241631 | 76241771 | E074 | -28985 |
| chr12 | 76241881 | 76243190 | E074 | -27566 |
| chr12 | 76258784 | 76258861 | E074 | -11895 |
| chr12 | 76283474 | 76283662 | E074 | 12718 |
| chr12 | 76283673 | 76283794 | E074 | 12917 |
| chr12 | 76283805 | 76283892 | E074 | 13049 |
| chr12 | 76294137 | 76294430 | E074 | 23381 |
| chr12 | 76294466 | 76294749 | E074 | 23710 |
| chr12 | 76302313 | 76304443 | E074 | 31557 |
| chr12 | 76230753 | 76231283 | E081 | -39473 |
| chr12 | 76231360 | 76232160 | E081 | -38596 |
| chr12 | 76235456 | 76235663 | E081 | -35093 |
| chr12 | 76241881 | 76243190 | E081 | -27566 |
| chr12 | 76270514 | 76272644 | E081 | 0 |
| chr12 | 76272678 | 76272790 | E081 | 1922 |
| chr12 | 76275790 | 76276028 | E081 | 5034 |
| chr12 | 76276150 | 76276409 | E081 | 5394 |
| chr12 | 76276610 | 76276688 | E081 | 5854 |
| chr12 | 76282268 | 76282359 | E081 | 11512 |
| chr12 | 76282808 | 76283384 | E081 | 12052 |
| chr12 | 76283474 | 76283662 | E081 | 12718 |
| chr12 | 76283805 | 76283892 | E081 | 13049 |
| chr12 | 76284022 | 76284243 | E081 | 13266 |
| chr12 | 76234228 | 76234327 | E082 | -36429 |
| chr12 | 76234437 | 76234511 | E082 | -36245 |
| chr12 | 76234572 | 76234747 | E082 | -36009 |
| chr12 | 76235101 | 76235190 | E082 | -35566 |
| chr12 | 76235284 | 76235334 | E082 | -35422 |
| chr12 | 76235456 | 76235663 | E082 | -35093 |
| chr12 | 76239515 | 76239568 | E082 | -31188 |
| chr12 | 76241881 | 76243190 | E082 | -27566 |
| chr12 | 76270514 | 76272644 | E082 | 0 |
| chr12 | 76283474 | 76283662 | E082 | 12718 |
| chr12 | 76283673 | 76283794 | E082 | 12917 |
| chr12 | 76294137 | 76294430 | E082 | 23381 |
| chr12 | 76294466 | 76294749 | E082 | 23710 |