rs1684693

Homo sapiens
T>G
None
Check p-value
SNV (Single Nucleotide Variation)
T==0200 (5972/29794,GnomAD)
T==0189 (5510/29116,TOPMED)
T==0167 (838/5008,1000G)
T==0285 (1099/3854,ALSPAC)
T==0285 (1056/3708,TWINSUK)
chr14:42079054 (GRCh38.p7) (14q21.1)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 14NC_000014.9:g.42079054T>G
GRCh37.p13 chr 14NC_000014.8:g.42548257T>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.041G=0.959
1000GenomesAmericanSub694T=0.200G=0.800
1000GenomesEast AsianSub1008T=0.056G=0.944
1000GenomesEuropeSub1006T=0.327G=0.673
1000GenomesGlobalStudy-wide5008T=0.167G=0.833
1000GenomesSouth AsianSub978T=0.270G=0.730
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.285G=0.715
The Genome Aggregation DatabaseAfricanSub8718T=0.075G=0.925
The Genome Aggregation DatabaseAmericanSub830T=0.180G=0.820
The Genome Aggregation DatabaseEast AsianSub1590T=0.082G=0.918
The Genome Aggregation DatabaseEuropeSub18354T=0.269G=0.731
The Genome Aggregation DatabaseGlobalStudy-wide29794T=0.200G=0.799
The Genome Aggregation DatabaseOtherSub302T=0.340G=0.660
Trans-Omics for Precision MedicineGlobalStudy-wide29116T=0.189G=0.810
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.285G=0.715
PMID Title Author Journal
21529783A quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications.Heath ACBiol Psychiatry

P-Value

SNP ID p-value Traits Study
rs16846934.2E-05alcoholism (heaviness of drinking)21529783

eQTL of rs1684693 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs1684693 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.