Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 12 | NC_000012.12:g.109922516G>A |
GRCh37.p13 chr 12 | NC_000012.11:g.110360321G>A |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | G=1.000 | A=0.000 |
1000Genomes | American | Sub | 694 | G=1.000 | A=0.000 |
1000Genomes | East Asian | Sub | 1008 | G=0.928 | A=0.072 |
1000Genomes | Europe | Sub | 1006 | G=1.000 | A=0.000 |
1000Genomes | Global | Study-wide | 5008 | G=0.985 | A=0.015 |
1000Genomes | South Asian | Sub | 978 | G=1.000 | A=0.000 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.999 | A=0.001 |
The Genome Aggregation Database | African | Sub | 8722 | G=1.000 | A=0.000 |
The Genome Aggregation Database | American | Sub | 838 | G=1.000 | A=0.000 |
The Genome Aggregation Database | East Asian | Sub | 1620 | G=0.923 | A=0.077 |
The Genome Aggregation Database | Europe | Sub | 18490 | G=0.999 | A=0.000 |
The Genome Aggregation Database | Global | Study-wide | 29972 | G=0.995 | A=0.004 |
The Genome Aggregation Database | Other | Sub | 302 | G=1.000 | A=0.000 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.999 | A=0.000 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=1.000 | A=0.000 |
PMID | Title | Author | Journal |
---|---|---|---|
27181629 | Identification of rs671, a common variant of ALDH2, as a gout susceptibility locus. | Sakiyama M | Sci Rep |
24277619 | ALDH2 is associated to alcohol dependence and is the major genetic determinant of "daily maximum drinks" in a GWAS study of an isolated rural Chinese sample. | Quillen EE | Am J Med Genet B Neuropsychiatr Genet |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs16940688 | 4.83E-08 | alcohol consumption (maxi-drinks) | 24277619 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr12 | 110310347 | 110310397 | E067 | -49924 |
chr12 | 110310407 | 110310457 | E067 | -49864 |
chr12 | 110312047 | 110312114 | E067 | -48207 |
chr12 | 110312462 | 110312512 | E067 | -47809 |
chr12 | 110312872 | 110312992 | E067 | -47329 |
chr12 | 110313227 | 110313321 | E067 | -47000 |
chr12 | 110313323 | 110313775 | E067 | -46546 |
chr12 | 110314195 | 110314271 | E067 | -46050 |
chr12 | 110314588 | 110314638 | E067 | -45683 |
chr12 | 110314691 | 110314741 | E067 | -45580 |
chr12 | 110339525 | 110339575 | E067 | -20746 |
chr12 | 110370723 | 110371221 | E067 | 10402 |
chr12 | 110374725 | 110375215 | E067 | 14404 |
chr12 | 110375247 | 110375509 | E067 | 14926 |
chr12 | 110384359 | 110384740 | E067 | 24038 |
chr12 | 110384816 | 110384898 | E067 | 24495 |
chr12 | 110384984 | 110385156 | E067 | 24663 |
chr12 | 110385205 | 110385361 | E067 | 24884 |
chr12 | 110385394 | 110385909 | E067 | 25073 |
chr12 | 110386003 | 110386065 | E067 | 25682 |
chr12 | 110386088 | 110387359 | E067 | 25767 |
chr12 | 110310347 | 110310397 | E068 | -49924 |
chr12 | 110310407 | 110310457 | E068 | -49864 |
chr12 | 110311844 | 110311907 | E068 | -48414 |
chr12 | 110312047 | 110312114 | E068 | -48207 |
chr12 | 110313227 | 110313321 | E068 | -47000 |
chr12 | 110313323 | 110313775 | E068 | -46546 |
chr12 | 110314195 | 110314271 | E068 | -46050 |
chr12 | 110314588 | 110314638 | E068 | -45683 |
chr12 | 110314691 | 110314741 | E068 | -45580 |
chr12 | 110367523 | 110367794 | E068 | 7202 |
chr12 | 110374725 | 110375215 | E068 | 14404 |
chr12 | 110375247 | 110375509 | E068 | 14926 |
chr12 | 110382717 | 110383304 | E068 | 22396 |
chr12 | 110384359 | 110384740 | E068 | 24038 |
chr12 | 110384816 | 110384898 | E068 | 24495 |
chr12 | 110384984 | 110385156 | E068 | 24663 |
chr12 | 110385205 | 110385361 | E068 | 24884 |
chr12 | 110385394 | 110385909 | E068 | 25073 |
chr12 | 110386003 | 110386065 | E068 | 25682 |
chr12 | 110386088 | 110387359 | E068 | 25767 |
chr12 | 110390249 | 110390569 | E068 | 29928 |
chr12 | 110390638 | 110390711 | E068 | 30317 |
chr12 | 110310347 | 110310397 | E069 | -49924 |
chr12 | 110310407 | 110310457 | E069 | -49864 |
chr12 | 110311844 | 110311907 | E069 | -48414 |
chr12 | 110312047 | 110312114 | E069 | -48207 |
chr12 | 110312462 | 110312512 | E069 | -47809 |
chr12 | 110312872 | 110312992 | E069 | -47329 |
chr12 | 110313227 | 110313321 | E069 | -47000 |
chr12 | 110313323 | 110313775 | E069 | -46546 |
chr12 | 110314195 | 110314271 | E069 | -46050 |
chr12 | 110314588 | 110314638 | E069 | -45683 |
chr12 | 110314691 | 110314741 | E069 | -45580 |
chr12 | 110315026 | 110315099 | E069 | -45222 |
chr12 | 110327187 | 110328082 | E069 | -32239 |
chr12 | 110328177 | 110328243 | E069 | -32078 |
chr12 | 110328565 | 110328824 | E069 | -31497 |
chr12 | 110339525 | 110339575 | E069 | -20746 |
chr12 | 110339615 | 110339748 | E069 | -20573 |
chr12 | 110370723 | 110371221 | E069 | 10402 |
chr12 | 110374725 | 110375215 | E069 | 14404 |
chr12 | 110375247 | 110375509 | E069 | 14926 |
chr12 | 110382717 | 110383304 | E069 | 22396 |
chr12 | 110384359 | 110384740 | E069 | 24038 |
chr12 | 110384816 | 110384898 | E069 | 24495 |
chr12 | 110384984 | 110385156 | E069 | 24663 |
chr12 | 110385205 | 110385361 | E069 | 24884 |
chr12 | 110385394 | 110385909 | E069 | 25073 |
chr12 | 110386003 | 110386065 | E069 | 25682 |
chr12 | 110386088 | 110387359 | E069 | 25767 |
chr12 | 110314588 | 110314638 | E070 | -45683 |
chr12 | 110314691 | 110314741 | E070 | -45580 |
chr12 | 110315026 | 110315099 | E070 | -45222 |
chr12 | 110325789 | 110325871 | E070 | -34450 |
chr12 | 110326940 | 110326990 | E070 | -33331 |
chr12 | 110327187 | 110328082 | E070 | -32239 |
chr12 | 110328177 | 110328243 | E070 | -32078 |
chr12 | 110328565 | 110328824 | E070 | -31497 |
chr12 | 110328896 | 110329018 | E070 | -31303 |
chr12 | 110310347 | 110310397 | E071 | -49924 |
chr12 | 110310407 | 110310457 | E071 | -49864 |
chr12 | 110311554 | 110311796 | E071 | -48525 |
chr12 | 110311844 | 110311907 | E071 | -48414 |
chr12 | 110312047 | 110312114 | E071 | -48207 |
chr12 | 110312462 | 110312512 | E071 | -47809 |
chr12 | 110312872 | 110312992 | E071 | -47329 |
chr12 | 110313227 | 110313321 | E071 | -47000 |
chr12 | 110313323 | 110313775 | E071 | -46546 |
chr12 | 110314195 | 110314271 | E071 | -46050 |
chr12 | 110314588 | 110314638 | E071 | -45683 |
chr12 | 110314691 | 110314741 | E071 | -45580 |
chr12 | 110327187 | 110328082 | E071 | -32239 |
chr12 | 110339525 | 110339575 | E071 | -20746 |
chr12 | 110339615 | 110339748 | E071 | -20573 |
chr12 | 110370259 | 110370691 | E071 | 9938 |
chr12 | 110370723 | 110371221 | E071 | 10402 |
chr12 | 110374725 | 110375215 | E071 | 14404 |
chr12 | 110375247 | 110375509 | E071 | 14926 |
chr12 | 110384359 | 110384740 | E071 | 24038 |
chr12 | 110384816 | 110384898 | E071 | 24495 |
chr12 | 110384984 | 110385156 | E071 | 24663 |
chr12 | 110385205 | 110385361 | E071 | 24884 |
chr12 | 110385394 | 110385909 | E071 | 25073 |
chr12 | 110386003 | 110386065 | E071 | 25682 |
chr12 | 110386088 | 110387359 | E071 | 25767 |
chr12 | 110310347 | 110310397 | E072 | -49924 |
chr12 | 110310407 | 110310457 | E072 | -49864 |
chr12 | 110311554 | 110311796 | E072 | -48525 |
chr12 | 110311844 | 110311907 | E072 | -48414 |
chr12 | 110312047 | 110312114 | E072 | -48207 |
chr12 | 110313227 | 110313321 | E072 | -47000 |
chr12 | 110313323 | 110313775 | E072 | -46546 |
chr12 | 110339615 | 110339748 | E072 | -20573 |
chr12 | 110370723 | 110371221 | E072 | 10402 |
chr12 | 110374725 | 110375215 | E072 | 14404 |
chr12 | 110375247 | 110375509 | E072 | 14926 |
chr12 | 110384359 | 110384740 | E072 | 24038 |
chr12 | 110384816 | 110384898 | E072 | 24495 |
chr12 | 110384984 | 110385156 | E072 | 24663 |
chr12 | 110385205 | 110385361 | E072 | 24884 |
chr12 | 110385394 | 110385909 | E072 | 25073 |
chr12 | 110386003 | 110386065 | E072 | 25682 |
chr12 | 110386088 | 110387359 | E072 | 25767 |
chr12 | 110310347 | 110310397 | E073 | -49924 |
chr12 | 110311554 | 110311796 | E073 | -48525 |
chr12 | 110311844 | 110311907 | E073 | -48414 |
chr12 | 110312047 | 110312114 | E073 | -48207 |
chr12 | 110313227 | 110313321 | E073 | -47000 |
chr12 | 110313323 | 110313775 | E073 | -46546 |
chr12 | 110314195 | 110314271 | E073 | -46050 |
chr12 | 110314588 | 110314638 | E073 | -45683 |
chr12 | 110314691 | 110314741 | E073 | -45580 |
chr12 | 110315026 | 110315099 | E073 | -45222 |
chr12 | 110374725 | 110375215 | E073 | 14404 |
chr12 | 110375247 | 110375509 | E073 | 14926 |
chr12 | 110384359 | 110384740 | E073 | 24038 |
chr12 | 110384816 | 110384898 | E073 | 24495 |
chr12 | 110384984 | 110385156 | E073 | 24663 |
chr12 | 110385205 | 110385361 | E073 | 24884 |
chr12 | 110385394 | 110385909 | E073 | 25073 |
chr12 | 110386003 | 110386065 | E073 | 25682 |
chr12 | 110386088 | 110387359 | E073 | 25767 |
chr12 | 110310347 | 110310397 | E074 | -49924 |
chr12 | 110310407 | 110310457 | E074 | -49864 |
chr12 | 110311554 | 110311796 | E074 | -48525 |
chr12 | 110311844 | 110311907 | E074 | -48414 |
chr12 | 110312047 | 110312114 | E074 | -48207 |
chr12 | 110312462 | 110312512 | E074 | -47809 |
chr12 | 110312872 | 110312992 | E074 | -47329 |
chr12 | 110313227 | 110313321 | E074 | -47000 |
chr12 | 110313323 | 110313775 | E074 | -46546 |
chr12 | 110314195 | 110314271 | E074 | -46050 |
chr12 | 110314588 | 110314638 | E074 | -45683 |
chr12 | 110314691 | 110314741 | E074 | -45580 |
chr12 | 110315026 | 110315099 | E074 | -45222 |
chr12 | 110339525 | 110339575 | E074 | -20746 |
chr12 | 110339615 | 110339748 | E074 | -20573 |
chr12 | 110369903 | 110369953 | E074 | 9582 |
chr12 | 110370259 | 110370691 | E074 | 9938 |
chr12 | 110370723 | 110371221 | E074 | 10402 |
chr12 | 110374725 | 110375215 | E074 | 14404 |
chr12 | 110375247 | 110375509 | E074 | 14926 |
chr12 | 110382717 | 110383304 | E074 | 22396 |
chr12 | 110384359 | 110384740 | E074 | 24038 |
chr12 | 110384816 | 110384898 | E074 | 24495 |
chr12 | 110384984 | 110385156 | E074 | 24663 |
chr12 | 110385205 | 110385361 | E074 | 24884 |
chr12 | 110385394 | 110385909 | E074 | 25073 |
chr12 | 110386003 | 110386065 | E074 | 25682 |
chr12 | 110386088 | 110387359 | E074 | 25767 |
chr12 | 110315403 | 110315965 | E081 | -44356 |
chr12 | 110316228 | 110316367 | E081 | -43954 |
chr12 | 110326940 | 110326990 | E081 | -33331 |
chr12 | 110327187 | 110328082 | E081 | -32239 |
chr12 | 110328177 | 110328243 | E081 | -32078 |
chr12 | 110328565 | 110328824 | E081 | -31497 |
chr12 | 110328896 | 110329018 | E081 | -31303 |
chr12 | 110315403 | 110315965 | E082 | -44356 |
chr12 | 110316051 | 110316131 | E082 | -44190 |
chr12 | 110316228 | 110316367 | E082 | -43954 |
chr12 | 110316383 | 110316501 | E082 | -43820 |
chr12 | 110316502 | 110316572 | E082 | -43749 |
chr12 | 110327187 | 110328082 | E082 | -32239 |
chr12 | 110328177 | 110328243 | E082 | -32078 |
chr12 | 110328565 | 110328824 | E082 | -31497 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr12 | 110316577 | 110319636 | E067 | -40685 |
chr12 | 110337667 | 110339338 | E067 | -20983 |
chr12 | 110316577 | 110319636 | E068 | -40685 |
chr12 | 110337667 | 110339338 | E068 | -20983 |
chr12 | 110316577 | 110319636 | E069 | -40685 |
chr12 | 110337667 | 110339338 | E069 | -20983 |
chr12 | 110316577 | 110319636 | E070 | -40685 |
chr12 | 110337667 | 110339338 | E070 | -20983 |
chr12 | 110316577 | 110319636 | E071 | -40685 |
chr12 | 110337667 | 110339338 | E071 | -20983 |
chr12 | 110316577 | 110319636 | E072 | -40685 |
chr12 | 110337667 | 110339338 | E072 | -20983 |
chr12 | 110316577 | 110319636 | E073 | -40685 |
chr12 | 110337667 | 110339338 | E073 | -20983 |
chr12 | 110316577 | 110319636 | E074 | -40685 |
chr12 | 110337667 | 110339338 | E074 | -20983 |
chr12 | 110316577 | 110319636 | E081 | -40685 |
chr12 | 110337667 | 110339338 | E081 | -20983 |
chr12 | 110316577 | 110319636 | E082 | -40685 |
chr12 | 110337667 | 110339338 | E082 | -20983 |