rs17037826

Homo sapiens
A>C
None
Check p-value
SNV (Single Nucleotide Variation)
C=0029 (884/29942,GnomAD)
C=0042 (1224/29118,TOPMED)
C=0027 (134/5008,1000G)
C=0032 (125/3854,ALSPAC)
C=0037 (137/3708,TWINSUK)
chr4:107528681 (GRCh38.p7) (4q25)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 4NC_000004.12:g.107528681A>C
GRCh37.p13 chr 4NC_000004.11:g.108449838A>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.958C=0.042
1000GenomesAmericanSub694A=0.990C=0.010
1000GenomesEast AsianSub1008A=0.999C=0.001
1000GenomesEuropeSub1006A=0.972C=0.028
1000GenomesGlobalStudy-wide5008A=0.973C=0.027
1000GenomesSouth AsianSub978A=0.960C=0.040
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.968C=0.032
The Genome Aggregation DatabaseAfricanSub8726A=0.953C=0.047
The Genome Aggregation DatabaseAmericanSub838A=0.970C=0.030
The Genome Aggregation DatabaseEast AsianSub1592A=0.999C=0.001
The Genome Aggregation DatabaseEuropeSub18484A=0.976C=0.023
The Genome Aggregation DatabaseGlobalStudy-wide29942A=0.970C=0.029
The Genome Aggregation DatabaseOtherSub302A=0.970C=0.030
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.958C=0.042
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.963C=0.037
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs170378260.000492alcohol dependence20201924

eQTL of rs17037826 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs17037826 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.