rs17220405

Homo sapiens
C>T
None
Check p-value
SNV (Single Nucleotide Variation)
None (
chr2:160752258 (GRCh38.p7) (2q24.2)
AD
GWASdb2
1   publication(s)
See rs on genome
1 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 2NC_000002.12:g.160752258C>T
GRCh37.p13 chr 2NC_000002.11:g.161608769C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs172204050.00049alcohol dependence20201924

eQTL of rs17220405 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs17220405 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr2161593077161593773E070-14996