SNP Detail Info-rs17310732

Organism: Homo sapiens

Alleles: G>A / G>T

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

A=0118 (3556/29940,GnomAD)
A=0099 (497/5008,1000G)
A=0121 (467/3854,ALSPAC)
A=0116 (430/3708,TWINSUK)

Position: chr8:98403209 (GRCh38.p7) (8q22.2)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	G=0.873	A=0.127
1000Genomes	American	Sub	694	G=0.920	A=0.080
1000Genomes	East Asian	Sub	1008	G=0.914	A=0.086
1000Genomes	Europe	Sub	1006	G=0.866	A=0.134
1000Genomes	Global	Study-wide	5008	G=0.901	A=0.099
1000Genomes	South Asian	Sub	978	G=0.950	A=0.050
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.879	A=0.121
The Genome Aggregation Database	African	Sub	8712	G=0.888	A=0.112
The Genome Aggregation Database	American	Sub	838	G=0.940	A=0.060
The Genome Aggregation Database	East Asian	Sub	1614	G=0.926	A=0.074
The Genome Aggregation Database	Europe	Sub	18474	G=0.871	A=0.128
The Genome Aggregation Database	Global	Study-wide	29940	G=0.881	A=0.118
The Genome Aggregation Database	Other	Sub	302	G=0.860	A=0.140
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.884	A=0.116

PMID	Title	Author	Journal
24277619	ALDH2 is associated to alcohol dependence and is the major genetic determinant of "daily maximum drinks" in a GWAS study of an isolated rural Chinese sample.	Quillen EE	Am J Med Genet B Neuropsychiatr Genet

SNP ID	p-value	Traits	Study
rs17310732	0.000626	alcohol consumption (maxi-drinks)	24277619

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs17310732