Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 9 | NC_000009.12:g.121569480C>T |
GRCh37.p13 chr 9 | NC_000009.11:g.124331759C>T |
Molecule type | Change | Amino acid[Codon] | SO Term |
---|---|---|---|
DAB2IP transcript variant 1 | NM_032552.3:c. | N/A | Intron Variant |
DAB2IP transcript variant 2 | NM_138709.2:c. | N/A | Genic Upstream Transcript Variant |
DAB2IP transcript variant X7 | XM_005251721.1:c. | N/A | Intron Variant |
DAB2IP transcript variant X5 | XM_005251719.4:c. | N/A | Genic Upstream Transcript Variant |
DAB2IP transcript variant X9 | XM_005251724.4:c. | N/A | Genic Upstream Transcript Variant |
DAB2IP transcript variant X1 | XM_011518264.2:c. | N/A | Genic Upstream Transcript Variant |
DAB2IP transcript variant X2 | XM_011518265.2:c. | N/A | Genic Upstream Transcript Variant |
DAB2IP transcript variant X3 | XM_011518266.2:c. | N/A | Genic Upstream Transcript Variant |
DAB2IP transcript variant X4 | XM_011518267.2:c. | N/A | Genic Upstream Transcript Variant |
DAB2IP transcript variant X10 | XM_011518270.2:c. | N/A | Genic Upstream Transcript Variant |
DAB2IP transcript variant X12 | XM_011518271.2:c. | N/A | Genic Upstream Transcript Variant |
DAB2IP transcript variant X6 | XM_017014298.1:c. | N/A | Genic Upstream Transcript Variant |
DAB2IP transcript variant X8 | XM_017014299.1:c. | N/A | Genic Upstream Transcript Variant |
DAB2IP transcript variant X11 | XM_017014300.1:c. | N/A | Genic Upstream Transcript Variant |
Molecule type | Change | Amino acid[Codon] | SO Term |
---|---|---|---|
LOC107987016 transcript | XR_001746560.1:n....XR_001746560.1:n.85G>A | G>A | Non Coding Transcript Variant |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | C=0.650 | T=0.350 |
1000Genomes | American | Sub | 694 | C=0.800 | T=0.200 |
1000Genomes | East Asian | Sub | 1008 | C=0.999 | T=0.001 |
1000Genomes | Europe | Sub | 1006 | C=0.706 | T=0.294 |
1000Genomes | Global | Study-wide | 5008 | C=0.798 | T=0.202 |
1000Genomes | South Asian | Sub | 978 | C=0.880 | T=0.120 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | C=0.683 | T=0.317 |
The Genome Aggregation Database | African | Sub | 8708 | C=0.655 | T=0.345 |
The Genome Aggregation Database | American | Sub | 838 | C=0.840 | T=0.160 |
The Genome Aggregation Database | East Asian | Sub | 1622 | C=0.999 | T=0.001 |
The Genome Aggregation Database | Europe | Sub | 18470 | C=0.718 | T=0.281 |
The Genome Aggregation Database | Global | Study-wide | 29936 | C=0.718 | T=0.281 |
The Genome Aggregation Database | Other | Sub | 298 | C=0.700 | T=0.300 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | C=0.690 | T=0.309 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | C=0.682 | T=0.318 |
PMID | Title | Author | Journal |
---|---|---|---|
21314694 | Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample. | Kendler KS | Alcohol Clin Exp Res |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs1757321 | 0.000156 | alcohol dependence | 21314694 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr9 | 124308004 | 124308815 | E067 | -22944 |
chr9 | 124326500 | 124326603 | E067 | -5156 |
chr9 | 124326686 | 124326756 | E067 | -5003 |
chr9 | 124326778 | 124326830 | E067 | -4929 |
chr9 | 124326924 | 124326997 | E067 | -4762 |
chr9 | 124327013 | 124327209 | E067 | -4550 |
chr9 | 124328720 | 124331565 | E067 | -194 |
chr9 | 124331665 | 124331825 | E067 | 0 |
chr9 | 124336134 | 124336241 | E067 | 4375 |
chr9 | 124336283 | 124336375 | E067 | 4524 |
chr9 | 124338843 | 124338904 | E067 | 7084 |
chr9 | 124338929 | 124338979 | E067 | 7170 |
chr9 | 124338987 | 124339267 | E067 | 7228 |
chr9 | 124339358 | 124339816 | E067 | 7599 |
chr9 | 124339932 | 124340162 | E067 | 8173 |
chr9 | 124340230 | 124340280 | E067 | 8471 |
chr9 | 124343477 | 124343527 | E067 | 11718 |
chr9 | 124343528 | 124343578 | E067 | 11769 |
chr9 | 124343600 | 124343650 | E067 | 11841 |
chr9 | 124343729 | 124343799 | E067 | 11970 |
chr9 | 124343908 | 124344728 | E067 | 12149 |
chr9 | 124344731 | 124344793 | E067 | 12972 |
chr9 | 124347237 | 124347338 | E067 | 15478 |
chr9 | 124363255 | 124363305 | E067 | 31496 |
chr9 | 124365676 | 124365735 | E067 | 33917 |
chr9 | 124365949 | 124366009 | E067 | 34190 |
chr9 | 124366067 | 124366214 | E067 | 34308 |
chr9 | 124369778 | 124370680 | E067 | 38019 |
chr9 | 124370691 | 124370971 | E067 | 38932 |
chr9 | 124371576 | 124371983 | E067 | 39817 |
chr9 | 124371987 | 124373218 | E067 | 40228 |
chr9 | 124319702 | 124321219 | E068 | -10540 |
chr9 | 124326778 | 124326830 | E068 | -4929 |
chr9 | 124326924 | 124326997 | E068 | -4762 |
chr9 | 124327013 | 124327209 | E068 | -4550 |
chr9 | 124328608 | 124328669 | E068 | -3090 |
chr9 | 124328720 | 124331565 | E068 | -194 |
chr9 | 124336748 | 124336837 | E068 | 4989 |
chr9 | 124336845 | 124336918 | E068 | 5086 |
chr9 | 124337191 | 124337298 | E068 | 5432 |
chr9 | 124343207 | 124343299 | E068 | 11448 |
chr9 | 124343477 | 124343527 | E068 | 11718 |
chr9 | 124343528 | 124343578 | E068 | 11769 |
chr9 | 124343600 | 124343650 | E068 | 11841 |
chr9 | 124343729 | 124343799 | E068 | 11970 |
chr9 | 124344731 | 124344793 | E068 | 12972 |
chr9 | 124344907 | 124345289 | E068 | 13148 |
chr9 | 124346835 | 124346967 | E068 | 15076 |
chr9 | 124362923 | 124363211 | E068 | 31164 |
chr9 | 124363255 | 124363305 | E068 | 31496 |
chr9 | 124363335 | 124363904 | E068 | 31576 |
chr9 | 124364038 | 124364260 | E068 | 32279 |
chr9 | 124365385 | 124365655 | E068 | 33626 |
chr9 | 124365676 | 124365735 | E068 | 33917 |
chr9 | 124365949 | 124366009 | E068 | 34190 |
chr9 | 124366067 | 124366214 | E068 | 34308 |
chr9 | 124367009 | 124367224 | E068 | 35250 |
chr9 | 124369626 | 124369754 | E068 | 37867 |
chr9 | 124369778 | 124370680 | E068 | 38019 |
chr9 | 124370691 | 124370971 | E068 | 38932 |
chr9 | 124371576 | 124371983 | E068 | 39817 |
chr9 | 124371987 | 124373218 | E068 | 40228 |
chr9 | 124374763 | 124375670 | E068 | 43004 |
chr9 | 124375711 | 124376057 | E068 | 43952 |
chr9 | 124376098 | 124376164 | E068 | 44339 |
chr9 | 124379048 | 124379141 | E068 | 47289 |
chr9 | 124300474 | 124300866 | E069 | -30893 |
chr9 | 124313657 | 124313787 | E069 | -17972 |
chr9 | 124318307 | 124319360 | E069 | -12399 |
chr9 | 124319702 | 124321219 | E069 | -10540 |
chr9 | 124337191 | 124337298 | E069 | 5432 |
chr9 | 124337394 | 124337502 | E069 | 5635 |
chr9 | 124343477 | 124343527 | E069 | 11718 |
chr9 | 124343528 | 124343578 | E069 | 11769 |
chr9 | 124343600 | 124343650 | E069 | 11841 |
chr9 | 124343729 | 124343799 | E069 | 11970 |
chr9 | 124344731 | 124344793 | E069 | 12972 |
chr9 | 124363335 | 124363904 | E069 | 31576 |
chr9 | 124367009 | 124367224 | E069 | 35250 |
chr9 | 124369778 | 124370680 | E069 | 38019 |
chr9 | 124371987 | 124373218 | E069 | 40228 |
chr9 | 124374763 | 124375670 | E069 | 43004 |
chr9 | 124375711 | 124376057 | E069 | 43952 |
chr9 | 124328720 | 124331565 | E070 | -194 |
chr9 | 124343908 | 124344728 | E070 | 12149 |
chr9 | 124344731 | 124344793 | E070 | 12972 |
chr9 | 124291051 | 124292528 | E071 | -39231 |
chr9 | 124318307 | 124319360 | E071 | -12399 |
chr9 | 124319702 | 124321219 | E071 | -10540 |
chr9 | 124328329 | 124328522 | E071 | -3237 |
chr9 | 124328608 | 124328669 | E071 | -3090 |
chr9 | 124331665 | 124331825 | E071 | 0 |
chr9 | 124336748 | 124336837 | E071 | 4989 |
chr9 | 124336845 | 124336918 | E071 | 5086 |
chr9 | 124337191 | 124337298 | E071 | 5432 |
chr9 | 124337394 | 124337502 | E071 | 5635 |
chr9 | 124337519 | 124337581 | E071 | 5760 |
chr9 | 124337582 | 124337772 | E071 | 5823 |
chr9 | 124343207 | 124343299 | E071 | 11448 |
chr9 | 124343477 | 124343527 | E071 | 11718 |
chr9 | 124343528 | 124343578 | E071 | 11769 |
chr9 | 124343600 | 124343650 | E071 | 11841 |
chr9 | 124343729 | 124343799 | E071 | 11970 |
chr9 | 124344731 | 124344793 | E071 | 12972 |
chr9 | 124344907 | 124345289 | E071 | 13148 |
chr9 | 124363335 | 124363904 | E071 | 31576 |
chr9 | 124364038 | 124364260 | E071 | 32279 |
chr9 | 124364326 | 124364376 | E071 | 32567 |
chr9 | 124364564 | 124364626 | E071 | 32805 |
chr9 | 124365949 | 124366009 | E071 | 34190 |
chr9 | 124366067 | 124366214 | E071 | 34308 |
chr9 | 124366501 | 124366982 | E071 | 34742 |
chr9 | 124367009 | 124367224 | E071 | 35250 |
chr9 | 124369778 | 124370680 | E071 | 38019 |
chr9 | 124370691 | 124370971 | E071 | 38932 |
chr9 | 124371439 | 124371523 | E071 | 39680 |
chr9 | 124371576 | 124371983 | E071 | 39817 |
chr9 | 124371987 | 124373218 | E071 | 40228 |
chr9 | 124374763 | 124375670 | E071 | 43004 |
chr9 | 124375711 | 124376057 | E071 | 43952 |
chr9 | 124376098 | 124376164 | E071 | 44339 |
chr9 | 124376204 | 124376268 | E071 | 44445 |
chr9 | 124378519 | 124378665 | E071 | 46760 |
chr9 | 124378757 | 124378817 | E071 | 46998 |
chr9 | 124378879 | 124378940 | E071 | 47120 |
chr9 | 124307628 | 124307981 | E072 | -23778 |
chr9 | 124318307 | 124319360 | E072 | -12399 |
chr9 | 124319702 | 124321219 | E072 | -10540 |
chr9 | 124328329 | 124328522 | E072 | -3237 |
chr9 | 124328608 | 124328669 | E072 | -3090 |
chr9 | 124331665 | 124331825 | E072 | 0 |
chr9 | 124337191 | 124337298 | E072 | 5432 |
chr9 | 124337394 | 124337502 | E072 | 5635 |
chr9 | 124337519 | 124337581 | E072 | 5760 |
chr9 | 124337582 | 124337772 | E072 | 5823 |
chr9 | 124337774 | 124337929 | E072 | 6015 |
chr9 | 124337933 | 124337992 | E072 | 6174 |
chr9 | 124339358 | 124339816 | E072 | 7599 |
chr9 | 124339932 | 124340162 | E072 | 8173 |
chr9 | 124343477 | 124343527 | E072 | 11718 |
chr9 | 124343528 | 124343578 | E072 | 11769 |
chr9 | 124343600 | 124343650 | E072 | 11841 |
chr9 | 124343729 | 124343799 | E072 | 11970 |
chr9 | 124343908 | 124344728 | E072 | 12149 |
chr9 | 124344731 | 124344793 | E072 | 12972 |
chr9 | 124344907 | 124345289 | E072 | 13148 |
chr9 | 124362923 | 124363211 | E072 | 31164 |
chr9 | 124363255 | 124363305 | E072 | 31496 |
chr9 | 124366501 | 124366982 | E072 | 34742 |
chr9 | 124367009 | 124367224 | E072 | 35250 |
chr9 | 124369336 | 124369431 | E072 | 37577 |
chr9 | 124369626 | 124369754 | E072 | 37867 |
chr9 | 124370691 | 124370971 | E072 | 38932 |
chr9 | 124371576 | 124371983 | E072 | 39817 |
chr9 | 124371987 | 124373218 | E072 | 40228 |
chr9 | 124374763 | 124375670 | E072 | 43004 |
chr9 | 124375711 | 124376057 | E072 | 43952 |
chr9 | 124376098 | 124376164 | E072 | 44339 |
chr9 | 124376204 | 124376268 | E072 | 44445 |
chr9 | 124378383 | 124378441 | E072 | 46624 |
chr9 | 124378519 | 124378665 | E072 | 46760 |
chr9 | 124378757 | 124378817 | E072 | 46998 |
chr9 | 124378879 | 124378940 | E072 | 47120 |
chr9 | 124379048 | 124379141 | E072 | 47289 |
chr9 | 124379188 | 124379311 | E072 | 47429 |
chr9 | 124289889 | 124289965 | E073 | -41794 |
chr9 | 124300474 | 124300866 | E073 | -30893 |
chr9 | 124307628 | 124307981 | E073 | -23778 |
chr9 | 124319702 | 124321219 | E073 | -10540 |
chr9 | 124326778 | 124326830 | E073 | -4929 |
chr9 | 124326924 | 124326997 | E073 | -4762 |
chr9 | 124327013 | 124327209 | E073 | -4550 |
chr9 | 124327211 | 124327520 | E073 | -4239 |
chr9 | 124327578 | 124327688 | E073 | -4071 |
chr9 | 124328329 | 124328522 | E073 | -3237 |
chr9 | 124328608 | 124328669 | E073 | -3090 |
chr9 | 124331665 | 124331825 | E073 | 0 |
chr9 | 124336511 | 124336621 | E073 | 4752 |
chr9 | 124336748 | 124336837 | E073 | 4989 |
chr9 | 124336845 | 124336918 | E073 | 5086 |
chr9 | 124337191 | 124337298 | E073 | 5432 |
chr9 | 124337394 | 124337502 | E073 | 5635 |
chr9 | 124337519 | 124337581 | E073 | 5760 |
chr9 | 124337582 | 124337772 | E073 | 5823 |
chr9 | 124338843 | 124338904 | E073 | 7084 |
chr9 | 124338929 | 124338979 | E073 | 7170 |
chr9 | 124338987 | 124339267 | E073 | 7228 |
chr9 | 124339358 | 124339816 | E073 | 7599 |
chr9 | 124339932 | 124340162 | E073 | 8173 |
chr9 | 124343207 | 124343299 | E073 | 11448 |
chr9 | 124343477 | 124343527 | E073 | 11718 |
chr9 | 124343528 | 124343578 | E073 | 11769 |
chr9 | 124343600 | 124343650 | E073 | 11841 |
chr9 | 124343729 | 124343799 | E073 | 11970 |
chr9 | 124343908 | 124344728 | E073 | 12149 |
chr9 | 124344731 | 124344793 | E073 | 12972 |
chr9 | 124344907 | 124345289 | E073 | 13148 |
chr9 | 124362923 | 124363211 | E073 | 31164 |
chr9 | 124363255 | 124363305 | E073 | 31496 |
chr9 | 124363335 | 124363904 | E073 | 31576 |
chr9 | 124365676 | 124365735 | E073 | 33917 |
chr9 | 124365949 | 124366009 | E073 | 34190 |
chr9 | 124366067 | 124366214 | E073 | 34308 |
chr9 | 124366501 | 124366982 | E073 | 34742 |
chr9 | 124367009 | 124367224 | E073 | 35250 |
chr9 | 124369778 | 124370680 | E073 | 38019 |
chr9 | 124371987 | 124373218 | E073 | 40228 |
chr9 | 124374763 | 124375670 | E073 | 43004 |
chr9 | 124375711 | 124376057 | E073 | 43952 |
chr9 | 124376098 | 124376164 | E073 | 44339 |
chr9 | 124308004 | 124308815 | E074 | -22944 |
chr9 | 124319702 | 124321219 | E074 | -10540 |
chr9 | 124328720 | 124331565 | E074 | -194 |
chr9 | 124336134 | 124336241 | E074 | 4375 |
chr9 | 124336283 | 124336375 | E074 | 4524 |
chr9 | 124336424 | 124336508 | E074 | 4665 |
chr9 | 124336511 | 124336621 | E074 | 4752 |
chr9 | 124336748 | 124336837 | E074 | 4989 |
chr9 | 124336845 | 124336918 | E074 | 5086 |
chr9 | 124337191 | 124337298 | E074 | 5432 |
chr9 | 124337394 | 124337502 | E074 | 5635 |
chr9 | 124337519 | 124337581 | E074 | 5760 |
chr9 | 124337582 | 124337772 | E074 | 5823 |
chr9 | 124337774 | 124337929 | E074 | 6015 |
chr9 | 124338987 | 124339267 | E074 | 7228 |
chr9 | 124343477 | 124343527 | E074 | 11718 |
chr9 | 124343528 | 124343578 | E074 | 11769 |
chr9 | 124343600 | 124343650 | E074 | 11841 |
chr9 | 124343729 | 124343799 | E074 | 11970 |
chr9 | 124344731 | 124344793 | E074 | 12972 |
chr9 | 124344907 | 124345289 | E074 | 13148 |
chr9 | 124345536 | 124345583 | E074 | 13777 |
chr9 | 124345596 | 124345682 | E074 | 13837 |
chr9 | 124347237 | 124347338 | E074 | 15478 |
chr9 | 124362923 | 124363211 | E074 | 31164 |
chr9 | 124363255 | 124363305 | E074 | 31496 |
chr9 | 124363335 | 124363904 | E074 | 31576 |
chr9 | 124366067 | 124366214 | E074 | 34308 |
chr9 | 124366501 | 124366982 | E074 | 34742 |
chr9 | 124369336 | 124369431 | E074 | 37577 |
chr9 | 124369626 | 124369754 | E074 | 37867 |
chr9 | 124369778 | 124370680 | E074 | 38019 |
chr9 | 124371987 | 124373218 | E074 | 40228 |
chr9 | 124374763 | 124375670 | E074 | 43004 |
chr9 | 124375711 | 124376057 | E074 | 43952 |
chr9 | 124307628 | 124307981 | E081 | -23778 |
chr9 | 124308004 | 124308815 | E081 | -22944 |
chr9 | 124328720 | 124331565 | E081 | -194 |
chr9 | 124343908 | 124344728 | E081 | 12149 |
chr9 | 124344731 | 124344793 | E081 | 12972 |
chr9 | 124369778 | 124370680 | E081 | 38019 |
chr9 | 124328720 | 124331565 | E082 | -194 |
chr9 | 124343908 | 124344728 | E082 | 12149 |
chr9 | 124370691 | 124370971 | E082 | 38932 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr9 | 124359916 | 124362866 | E067 | 28157 |
chr9 | 124359916 | 124362866 | E068 | 28157 |
chr9 | 124359916 | 124362866 | E069 | 28157 |
chr9 | 124359916 | 124362866 | E071 | 28157 |
chr9 | 124359916 | 124362866 | E072 | 28157 |
chr9 | 124359916 | 124362866 | E073 | 28157 |
chr9 | 124359916 | 124362866 | E074 | 28157 |
chr9 | 124359916 | 124362866 | E082 | 28157 |