SNP Detail Info-rs17602660

Molecule type	Change	Amino acid[Codon]	SO Term
DGKB transcript variant 1	NM_004080.2:c.	N/A	Intron Variant
DGKB transcript variant 2	NM_145695.2:c.	N/A	Intron Variant
DGKB transcript variant X2	XM_005249628.2:c.	N/A	Intron Variant
DGKB transcript variant X5	XM_005249629.2:c.	N/A	Intron Variant
DGKB transcript variant X8	XM_005249630.2:c.	N/A	Intron Variant
DGKB transcript variant X15	XM_005249631.3:c.	N/A	Intron Variant
DGKB transcript variant X1	XM_011515153.2:c.	N/A	Intron Variant
DGKB transcript variant X1	XM_011515154.2:c.	N/A	Intron Variant
DGKB transcript variant X10	XM_011515156.2:c.	N/A	Intron Variant
DGKB transcript variant X13	XM_011515157.2:c.	N/A	Intron Variant
DGKB transcript variant X16	XM_011515158.2:c.	N/A	Intron Variant
DGKB transcript variant X4	XM_017011783.1:c.	N/A	Intron Variant
DGKB transcript variant X6	XM_017011784.1:c.	N/A	Intron Variant
DGKB transcript variant X7	XM_017011785.1:c.	N/A	Intron Variant
DGKB transcript variant X9	XM_017011786.1:c.	N/A	Intron Variant
DGKB transcript variant X11	XM_017011787.1:c.	N/A	Intron Variant
DGKB transcript variant X12	XM_017011788.1:c.	N/A	Intron Variant
DGKB transcript variant X14	XM_017011789.1:c.	N/A	Intron Variant
DGKB transcript variant X2	XM_017011790.1:c.	N/A	Intron Variant
DGKB transcript variant X3	XM_017011791.1:c.	N/A	Intron Variant
DGKB transcript variant X19	XM_017011792.1:c.	N/A	Intron Variant
DGKB transcript variant X5	XR_001744571.1:n.	N/A	Intron Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.999	T=0.001
1000Genomes	American	Sub	694	A=0.990	T=0.010
1000Genomes	East Asian	Sub	1008	A=1.000	T=0.000
1000Genomes	Europe	Sub	1006	A=0.960	T=0.040
1000Genomes	Global	Study-wide	5008	A=0.984	T=0.016
1000Genomes	South Asian	Sub	978	A=0.970	T=0.030
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.956	T=0.044
The Genome Aggregation Database	African	Sub	8722	A=0.992	T=0.008
The Genome Aggregation Database	American	Sub	834	A=0.990	T=0.010
The Genome Aggregation Database	East Asian	Sub	1606	A=1.000	T=0.000
The Genome Aggregation Database	Europe	Sub	18430	A=0.962	T=0.037
The Genome Aggregation Database	Global	Study-wide	29894	A=0.974	T=0.025
The Genome Aggregation Database	Other	Sub	302	A=0.990	T=0.010
Trans-Omics for Precision Medicine	Global	Study-wide	29118	A=0.972	T=0.028
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.954	T=0.046

PMID	Title	Author	Journal
21314694	Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.	Kendler KS	Alcohol Clin Exp Res

SNP ID	p-value	Traits	Study
rs17602660	0.000326	alcohol dependence	21314694

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs17602660