| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 12 | NC_000012.12:g.68375152G>A |
| GRCh37.p13 chr 12 | NC_000012.11:g.68768932G>A |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | G=0.881 | A=0.119 |
| 1000Genomes | American | Sub | 694 | G=0.750 | A=0.250 |
| 1000Genomes | East Asian | Sub | 1008 | G=0.919 | A=0.081 |
| 1000Genomes | Europe | Sub | 1006 | G=0.536 | A=0.464 |
| 1000Genomes | Global | Study-wide | 5008 | G=0.798 | A=0.202 |
| 1000Genomes | South Asian | Sub | 978 | G=0.870 | A=0.130 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.537 | A=0.463 |
| The Genome Aggregation Database | African | Sub | 8704 | G=0.837 | A=0.163 |
| The Genome Aggregation Database | American | Sub | 836 | G=0.720 | A=0.280 |
| The Genome Aggregation Database | East Asian | Sub | 1622 | G=0.919 | A=0.081 |
| The Genome Aggregation Database | Europe | Sub | 18462 | G=0.483 | A=0.516 |
| The Genome Aggregation Database | Global | Study-wide | 29926 | G=0.618 | A=0.381 |
| The Genome Aggregation Database | Other | Sub | 302 | G=0.680 | A=0.320 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.685 | A=0.314 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.527 | A=0.473 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 20201924 | Genome-wide association study of alcohol dependence implicates a region on chromosome 11. | Edenberg HJ | Alcohol Clin Exp Res |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs17813101 | 0.000955 | alcohol dependence | 20201924 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr12 | 68719896 | 68719959 | E067 | -48973 |
| chr12 | 68720647 | 68720748 | E067 | -48184 |
| chr12 | 68724904 | 68725014 | E067 | -43918 |
| chr12 | 68813987 | 68814814 | E067 | 45055 |
| chr12 | 68720647 | 68720748 | E068 | -48184 |
| chr12 | 68721778 | 68721833 | E068 | -47099 |
| chr12 | 68722188 | 68722278 | E068 | -46654 |
| chr12 | 68722479 | 68722663 | E068 | -46269 |
| chr12 | 68722683 | 68722762 | E068 | -46170 |
| chr12 | 68722871 | 68722954 | E068 | -45978 |
| chr12 | 68724904 | 68725014 | E068 | -43918 |
| chr12 | 68799067 | 68800701 | E068 | 30135 |
| chr12 | 68800791 | 68800859 | E068 | 31859 |
| chr12 | 68720647 | 68720748 | E069 | -48184 |
| chr12 | 68721778 | 68721833 | E069 | -47099 |
| chr12 | 68722188 | 68722278 | E069 | -46654 |
| chr12 | 68722479 | 68722663 | E069 | -46269 |
| chr12 | 68722683 | 68722762 | E069 | -46170 |
| chr12 | 68722871 | 68722954 | E069 | -45978 |
| chr12 | 68724904 | 68725014 | E069 | -43918 |
| chr12 | 68813987 | 68814814 | E069 | 45055 |
| chr12 | 68722479 | 68722663 | E070 | -46269 |
| chr12 | 68722683 | 68722762 | E070 | -46170 |
| chr12 | 68722871 | 68722954 | E070 | -45978 |
| chr12 | 68723136 | 68723176 | E070 | -45756 |
| chr12 | 68730512 | 68730631 | E070 | -38301 |
| chr12 | 68730774 | 68731099 | E070 | -37833 |
| chr12 | 68719896 | 68719959 | E071 | -48973 |
| chr12 | 68720647 | 68720748 | E071 | -48184 |
| chr12 | 68721778 | 68721833 | E071 | -47099 |
| chr12 | 68722188 | 68722278 | E071 | -46654 |
| chr12 | 68722479 | 68722663 | E071 | -46269 |
| chr12 | 68722683 | 68722762 | E071 | -46170 |
| chr12 | 68722871 | 68722954 | E071 | -45978 |
| chr12 | 68723136 | 68723176 | E071 | -45756 |
| chr12 | 68724904 | 68725014 | E071 | -43918 |
| chr12 | 68798958 | 68799055 | E071 | 30026 |
| chr12 | 68799067 | 68800701 | E071 | 30135 |
| chr12 | 68719896 | 68719959 | E072 | -48973 |
| chr12 | 68721778 | 68721833 | E072 | -47099 |
| chr12 | 68722188 | 68722278 | E072 | -46654 |
| chr12 | 68722479 | 68722663 | E072 | -46269 |
| chr12 | 68722683 | 68722762 | E072 | -46170 |
| chr12 | 68722871 | 68722954 | E072 | -45978 |
| chr12 | 68723136 | 68723176 | E072 | -45756 |
| chr12 | 68723201 | 68723261 | E072 | -45671 |
| chr12 | 68723277 | 68723361 | E072 | -45571 |
| chr12 | 68723407 | 68723487 | E072 | -45445 |
| chr12 | 68723608 | 68723718 | E072 | -45214 |
| chr12 | 68723790 | 68723910 | E072 | -45022 |
| chr12 | 68724904 | 68725014 | E072 | -43918 |
| chr12 | 68813987 | 68814814 | E072 | 45055 |
| chr12 | 68721778 | 68721833 | E073 | -47099 |
| chr12 | 68722188 | 68722278 | E073 | -46654 |
| chr12 | 68722479 | 68722663 | E073 | -46269 |
| chr12 | 68723136 | 68723176 | E073 | -45756 |
| chr12 | 68799067 | 68800701 | E073 | 30135 |
| chr12 | 68813987 | 68814814 | E073 | 45055 |
| chr12 | 68719896 | 68719959 | E074 | -48973 |
| chr12 | 68720647 | 68720748 | E074 | -48184 |
| chr12 | 68721778 | 68721833 | E074 | -47099 |
| chr12 | 68722188 | 68722278 | E074 | -46654 |
| chr12 | 68722871 | 68722954 | E074 | -45978 |
| chr12 | 68723136 | 68723176 | E074 | -45756 |
| chr12 | 68723201 | 68723261 | E074 | -45671 |
| chr12 | 68723277 | 68723361 | E074 | -45571 |
| chr12 | 68723407 | 68723487 | E074 | -45445 |
| chr12 | 68724904 | 68725014 | E074 | -43918 |
| chr12 | 68727098 | 68727299 | E074 | -41633 |
| chr12 | 68799067 | 68800701 | E074 | 30135 |
| chr12 | 68813987 | 68814814 | E074 | 45055 |
| chr12 | 68722479 | 68722663 | E081 | -46269 |
| chr12 | 68722683 | 68722762 | E081 | -46170 |
| chr12 | 68722871 | 68722954 | E081 | -45978 |
| chr12 | 68723136 | 68723176 | E081 | -45756 |
| chr12 | 68723201 | 68723261 | E081 | -45671 |
| chr12 | 68723277 | 68723361 | E081 | -45571 |
| chr12 | 68723407 | 68723487 | E081 | -45445 |
| chr12 | 68723608 | 68723718 | E081 | -45214 |
| chr12 | 68723790 | 68723910 | E081 | -45022 |
| chr12 | 68727098 | 68727299 | E081 | -41633 |
| chr12 | 68727316 | 68727630 | E081 | -41302 |
| chr12 | 68768767 | 68769070 | E081 | 0 |
| chr12 | 68769190 | 68769240 | E081 | 258 |
| chr12 | 68769437 | 68769558 | E081 | 505 |
| chr12 | 68769602 | 68770446 | E081 | 670 |
| chr12 | 68770659 | 68770719 | E081 | 1727 |
| chr12 | 68770806 | 68770984 | E081 | 1874 |
| chr12 | 68771285 | 68771423 | E081 | 2353 |
| chr12 | 68771430 | 68771530 | E081 | 2498 |
| chr12 | 68771653 | 68772080 | E081 | 2721 |
| chr12 | 68772308 | 68772387 | E081 | 3376 |
| chr12 | 68772499 | 68772574 | E081 | 3567 |
| chr12 | 68798958 | 68799055 | E081 | 30026 |
| chr12 | 68799067 | 68800701 | E081 | 30135 |
| chr12 | 68800791 | 68800859 | E081 | 31859 |
| chr12 | 68801574 | 68801626 | E081 | 32642 |
| chr12 | 68813987 | 68814814 | E081 | 45055 |
| chr12 | 68815097 | 68815171 | E081 | 46165 |
| chr12 | 68815572 | 68815636 | E081 | 46640 |
| chr12 | 68815955 | 68816183 | E081 | 47023 |
| chr12 | 68816199 | 68816372 | E081 | 47267 |
| chr12 | 68816853 | 68817309 | E081 | 47921 |
| chr12 | 68818660 | 68818826 | E081 | 49728 |
| chr12 | 68723608 | 68723718 | E082 | -45214 |
| chr12 | 68723790 | 68723910 | E082 | -45022 |
| chr12 | 68727098 | 68727299 | E082 | -41633 |
| chr12 | 68727316 | 68727630 | E082 | -41302 |
| chr12 | 68728813 | 68728863 | E082 | -40069 |
| chr12 | 68728999 | 68729049 | E082 | -39883 |
| chr12 | 68729070 | 68729120 | E082 | -39812 |
| chr12 | 68729129 | 68729169 | E082 | -39763 |
| chr12 | 68729217 | 68729356 | E082 | -39576 |
| chr12 | 68729462 | 68729537 | E082 | -39395 |
| chr12 | 68769602 | 68770446 | E082 | 670 |
| chr12 | 68799067 | 68800701 | E082 | 30135 |
| Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
|---|---|---|---|---|
| chr12 | 68725148 | 68726981 | E067 | -41951 |
| chr12 | 68725148 | 68726981 | E068 | -41951 |
| chr12 | 68725148 | 68726981 | E069 | -41951 |
| chr12 | 68725148 | 68726981 | E070 | -41951 |
| chr12 | 68725148 | 68726981 | E071 | -41951 |
| chr12 | 68725148 | 68726981 | E072 | -41951 |
| chr12 | 68725148 | 68726981 | E073 | -41951 |
| chr12 | 68725148 | 68726981 | E074 | -41951 |
| chr12 | 68725148 | 68726981 | E081 | -41951 |
| chr12 | 68725148 | 68726981 | E082 | -41951 |