| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 11 | NC_000011.10:g.118808920A>T |
| GRCh37.p13 chr 11 | NC_000011.9:g.118679629A>T |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | A=0.812 | T=0.188 |
| 1000Genomes | American | Sub | 694 | A=0.450 | T=0.550 |
| 1000Genomes | East Asian | Sub | 1008 | A=0.650 | T=0.350 |
| 1000Genomes | Europe | Sub | 1006 | A=0.593 | T=0.407 |
| 1000Genomes | Global | Study-wide | 5008 | A=0.686 | T=0.314 |
| 1000Genomes | South Asian | Sub | 978 | A=0.810 | T=0.190 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.588 | T=0.412 |
| The Genome Aggregation Database | African | Sub | 8694 | A=0.787 | T=0.213 |
| The Genome Aggregation Database | American | Sub | 828 | A=0.410 | T=0.590 |
| The Genome Aggregation Database | East Asian | Sub | 1608 | A=0.654 | T=0.346 |
| The Genome Aggregation Database | Europe | Sub | 18348 | A=0.575 | T=0.424 |
| The Genome Aggregation Database | Global | Study-wide | 29776 | A=0.637 | T=0.363 |
| The Genome Aggregation Database | Other | Sub | 298 | A=0.590 | T=0.410 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.665 | T=0.334 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.592 | T=0.408 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 22536871 | Convergence of genetic influences in comorbidity. | McEachin RC | BMC Bioinformatics |
| 20158304 | A genomewide association study of nicotine and alcohol dependence in Australian and Dutch populations. | Lind PA | Twin Res Hum Genet |
| 21876473 | Confirmation of prior evidence of genetic susceptibility to alcoholism in a genome-wide association study of comorbid alcoholism and bipolar disorder. | Lydall GJ | Psychiatr Genet |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs1784300 | 2.6E-09 | alcohol and nictotine co-dependence | 20158304 |
| rs1784300 | 0.000000628 | Alcohol dependence | 20158304 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr11 | 118633250 | 118633299 | E067 | -46330 |
| chr11 | 118633444 | 118633498 | E067 | -46131 |
| chr11 | 118633697 | 118633747 | E067 | -45882 |
| chr11 | 118633867 | 118634044 | E067 | -45585 |
| chr11 | 118634064 | 118634303 | E067 | -45326 |
| chr11 | 118639130 | 118639277 | E067 | -40352 |
| chr11 | 118639416 | 118639578 | E067 | -40051 |
| chr11 | 118639582 | 118639673 | E067 | -39956 |
| chr11 | 118639733 | 118639848 | E067 | -39781 |
| chr11 | 118639944 | 118639984 | E067 | -39645 |
| chr11 | 118640074 | 118640261 | E067 | -39368 |
| chr11 | 118641088 | 118641365 | E067 | -38264 |
| chr11 | 118641453 | 118641743 | E067 | -37886 |
| chr11 | 118641773 | 118641877 | E067 | -37752 |
| chr11 | 118641999 | 118642682 | E067 | -36947 |
| chr11 | 118642723 | 118642837 | E067 | -36792 |
| chr11 | 118643020 | 118643134 | E067 | -36495 |
| chr11 | 118643140 | 118643180 | E067 | -36449 |
| chr11 | 118643221 | 118643289 | E067 | -36340 |
| chr11 | 118643387 | 118643517 | E067 | -36112 |
| chr11 | 118643536 | 118643672 | E067 | -35957 |
| chr11 | 118643720 | 118643807 | E067 | -35822 |
| chr11 | 118647601 | 118647641 | E067 | -31988 |
| chr11 | 118647731 | 118647812 | E067 | -31817 |
| chr11 | 118647899 | 118648062 | E067 | -31567 |
| chr11 | 118648202 | 118648242 | E067 | -31387 |
| chr11 | 118648765 | 118648863 | E067 | -30766 |
| chr11 | 118648947 | 118649033 | E067 | -30596 |
| chr11 | 118649047 | 118649127 | E067 | -30502 |
| chr11 | 118649215 | 118649255 | E067 | -30374 |
| chr11 | 118649273 | 118649399 | E067 | -30230 |
| chr11 | 118656490 | 118656726 | E067 | -22903 |
| chr11 | 118656844 | 118657132 | E067 | -22497 |
| chr11 | 118657144 | 118657234 | E067 | -22395 |
| chr11 | 118657749 | 118657817 | E067 | -21812 |
| chr11 | 118657960 | 118658010 | E067 | -21619 |
| chr11 | 118658284 | 118658342 | E067 | -21287 |
| chr11 | 118639130 | 118639277 | E068 | -40352 |
| chr11 | 118639416 | 118639578 | E068 | -40051 |
| chr11 | 118639582 | 118639673 | E068 | -39956 |
| chr11 | 118639733 | 118639848 | E068 | -39781 |
| chr11 | 118639944 | 118639984 | E068 | -39645 |
| chr11 | 118640074 | 118640261 | E068 | -39368 |
| chr11 | 118641088 | 118641365 | E068 | -38264 |
| chr11 | 118641453 | 118641743 | E068 | -37886 |
| chr11 | 118641773 | 118641877 | E068 | -37752 |
| chr11 | 118641999 | 118642682 | E068 | -36947 |
| chr11 | 118642723 | 118642837 | E068 | -36792 |
| chr11 | 118643020 | 118643134 | E068 | -36495 |
| chr11 | 118643140 | 118643180 | E068 | -36449 |
| chr11 | 118643221 | 118643289 | E068 | -36340 |
| chr11 | 118643387 | 118643517 | E068 | -36112 |
| chr11 | 118643536 | 118643672 | E068 | -35957 |
| chr11 | 118643720 | 118643807 | E068 | -35822 |
| chr11 | 118643919 | 118643969 | E068 | -35660 |
| chr11 | 118644162 | 118644212 | E068 | -35417 |
| chr11 | 118644833 | 118644887 | E068 | -34742 |
| chr11 | 118645045 | 118645125 | E068 | -34504 |
| chr11 | 118647261 | 118647311 | E068 | -32318 |
| chr11 | 118647601 | 118647641 | E068 | -31988 |
| chr11 | 118647731 | 118647812 | E068 | -31817 |
| chr11 | 118647899 | 118648062 | E068 | -31567 |
| chr11 | 118653097 | 118653149 | E068 | -26480 |
| chr11 | 118653163 | 118653284 | E068 | -26345 |
| chr11 | 118656490 | 118656726 | E068 | -22903 |
| chr11 | 118656844 | 118657132 | E068 | -22497 |
| chr11 | 118657144 | 118657234 | E068 | -22395 |
| chr11 | 118657488 | 118657733 | E068 | -21896 |
| chr11 | 118657749 | 118657817 | E068 | -21812 |
| chr11 | 118657960 | 118658010 | E068 | -21619 |
| chr11 | 118658284 | 118658342 | E068 | -21287 |
| chr11 | 118691100 | 118692101 | E068 | 11471 |
| chr11 | 118633250 | 118633299 | E069 | -46330 |
| chr11 | 118633444 | 118633498 | E069 | -46131 |
| chr11 | 118638523 | 118638637 | E069 | -40992 |
| chr11 | 118639130 | 118639277 | E069 | -40352 |
| chr11 | 118639416 | 118639578 | E069 | -40051 |
| chr11 | 118639582 | 118639673 | E069 | -39956 |
| chr11 | 118639733 | 118639848 | E069 | -39781 |
| chr11 | 118639944 | 118639984 | E069 | -39645 |
| chr11 | 118640074 | 118640261 | E069 | -39368 |
| chr11 | 118641088 | 118641365 | E069 | -38264 |
| chr11 | 118641453 | 118641743 | E069 | -37886 |
| chr11 | 118641773 | 118641877 | E069 | -37752 |
| chr11 | 118641999 | 118642682 | E069 | -36947 |
| chr11 | 118642723 | 118642837 | E069 | -36792 |
| chr11 | 118643020 | 118643134 | E069 | -36495 |
| chr11 | 118643140 | 118643180 | E069 | -36449 |
| chr11 | 118643221 | 118643289 | E069 | -36340 |
| chr11 | 118643387 | 118643517 | E069 | -36112 |
| chr11 | 118643536 | 118643672 | E069 | -35957 |
| chr11 | 118643720 | 118643807 | E069 | -35822 |
| chr11 | 118643919 | 118643969 | E069 | -35660 |
| chr11 | 118644162 | 118644212 | E069 | -35417 |
| chr11 | 118644833 | 118644887 | E069 | -34742 |
| chr11 | 118647601 | 118647641 | E069 | -31988 |
| chr11 | 118647731 | 118647812 | E069 | -31817 |
| chr11 | 118647899 | 118648062 | E069 | -31567 |
| chr11 | 118653468 | 118653518 | E069 | -26111 |
| chr11 | 118653707 | 118653747 | E069 | -25882 |
| chr11 | 118655717 | 118655816 | E069 | -23813 |
| chr11 | 118656490 | 118656726 | E069 | -22903 |
| chr11 | 118656844 | 118657132 | E069 | -22497 |
| chr11 | 118657144 | 118657234 | E069 | -22395 |
| chr11 | 118657488 | 118657733 | E069 | -21896 |
| chr11 | 118657749 | 118657817 | E069 | -21812 |
| chr11 | 118657960 | 118658010 | E069 | -21619 |
| chr11 | 118658284 | 118658342 | E069 | -21287 |
| chr11 | 118658432 | 118658472 | E069 | -21157 |
| chr11 | 118658640 | 118658692 | E069 | -20937 |
| chr11 | 118658815 | 118658936 | E069 | -20693 |
| chr11 | 118658950 | 118658990 | E069 | -20639 |
| chr11 | 118659060 | 118659142 | E069 | -20487 |
| chr11 | 118691100 | 118692101 | E069 | 11471 |
| chr11 | 118641999 | 118642682 | E070 | -36947 |
| chr11 | 118642723 | 118642837 | E070 | -36792 |
| chr11 | 118643020 | 118643134 | E070 | -36495 |
| chr11 | 118643140 | 118643180 | E070 | -36449 |
| chr11 | 118643221 | 118643289 | E070 | -36340 |
| chr11 | 118643387 | 118643517 | E070 | -36112 |
| chr11 | 118656023 | 118656085 | E070 | -23544 |
| chr11 | 118656130 | 118656335 | E070 | -23294 |
| chr11 | 118656490 | 118656726 | E070 | -22903 |
| chr11 | 118656844 | 118657132 | E070 | -22497 |
| chr11 | 118657144 | 118657234 | E070 | -22395 |
| chr11 | 118657488 | 118657733 | E070 | -21896 |
| chr11 | 118657749 | 118657817 | E070 | -21812 |
| chr11 | 118657960 | 118658010 | E070 | -21619 |
| chr11 | 118658284 | 118658342 | E070 | -21287 |
| chr11 | 118658432 | 118658472 | E070 | -21157 |
| chr11 | 118658640 | 118658692 | E070 | -20937 |
| chr11 | 118658815 | 118658936 | E070 | -20693 |
| chr11 | 118658950 | 118658990 | E070 | -20639 |
| chr11 | 118659060 | 118659142 | E070 | -20487 |
| chr11 | 118691100 | 118692101 | E070 | 11471 |
| chr11 | 118638523 | 118638637 | E071 | -40992 |
| chr11 | 118639130 | 118639277 | E071 | -40352 |
| chr11 | 118639416 | 118639578 | E071 | -40051 |
| chr11 | 118639582 | 118639673 | E071 | -39956 |
| chr11 | 118639733 | 118639848 | E071 | -39781 |
| chr11 | 118639944 | 118639984 | E071 | -39645 |
| chr11 | 118640074 | 118640261 | E071 | -39368 |
| chr11 | 118641088 | 118641365 | E071 | -38264 |
| chr11 | 118641453 | 118641743 | E071 | -37886 |
| chr11 | 118641773 | 118641877 | E071 | -37752 |
| chr11 | 118641999 | 118642682 | E071 | -36947 |
| chr11 | 118642723 | 118642837 | E071 | -36792 |
| chr11 | 118643020 | 118643134 | E071 | -36495 |
| chr11 | 118643140 | 118643180 | E071 | -36449 |
| chr11 | 118643221 | 118643289 | E071 | -36340 |
| chr11 | 118643387 | 118643517 | E071 | -36112 |
| chr11 | 118643536 | 118643672 | E071 | -35957 |
| chr11 | 118643720 | 118643807 | E071 | -35822 |
| chr11 | 118643919 | 118643969 | E071 | -35660 |
| chr11 | 118644162 | 118644212 | E071 | -35417 |
| chr11 | 118644833 | 118644887 | E071 | -34742 |
| chr11 | 118645045 | 118645125 | E071 | -34504 |
| chr11 | 118645239 | 118645279 | E071 | -34350 |
| chr11 | 118647261 | 118647311 | E071 | -32318 |
| chr11 | 118647601 | 118647641 | E071 | -31988 |
| chr11 | 118647731 | 118647812 | E071 | -31817 |
| chr11 | 118647899 | 118648062 | E071 | -31567 |
| chr11 | 118648202 | 118648242 | E071 | -31387 |
| chr11 | 118651701 | 118651774 | E071 | -27855 |
| chr11 | 118653097 | 118653149 | E071 | -26480 |
| chr11 | 118653163 | 118653284 | E071 | -26345 |
| chr11 | 118653468 | 118653518 | E071 | -26111 |
| chr11 | 118653707 | 118653747 | E071 | -25882 |
| chr11 | 118656490 | 118656726 | E071 | -22903 |
| chr11 | 118656844 | 118657132 | E071 | -22497 |
| chr11 | 118657144 | 118657234 | E071 | -22395 |
| chr11 | 118657488 | 118657733 | E071 | -21896 |
| chr11 | 118657749 | 118657817 | E071 | -21812 |
| chr11 | 118658815 | 118658936 | E071 | -20693 |
| chr11 | 118658950 | 118658990 | E071 | -20639 |
| chr11 | 118659060 | 118659142 | E071 | -20487 |
| chr11 | 118691100 | 118692101 | E071 | 11471 |
| chr11 | 118639130 | 118639277 | E072 | -40352 |
| chr11 | 118639416 | 118639578 | E072 | -40051 |
| chr11 | 118639582 | 118639673 | E072 | -39956 |
| chr11 | 118639733 | 118639848 | E072 | -39781 |
| chr11 | 118639944 | 118639984 | E072 | -39645 |
| chr11 | 118641088 | 118641365 | E072 | -38264 |
| chr11 | 118641773 | 118641877 | E072 | -37752 |
| chr11 | 118641999 | 118642682 | E072 | -36947 |
| chr11 | 118642723 | 118642837 | E072 | -36792 |
| chr11 | 118643020 | 118643134 | E072 | -36495 |
| chr11 | 118643140 | 118643180 | E072 | -36449 |
| chr11 | 118643221 | 118643289 | E072 | -36340 |
| chr11 | 118643387 | 118643517 | E072 | -36112 |
| chr11 | 118643536 | 118643672 | E072 | -35957 |
| chr11 | 118643720 | 118643807 | E072 | -35822 |
| chr11 | 118643919 | 118643969 | E072 | -35660 |
| chr11 | 118644162 | 118644212 | E072 | -35417 |
| chr11 | 118644833 | 118644887 | E072 | -34742 |
| chr11 | 118645045 | 118645125 | E072 | -34504 |
| chr11 | 118647601 | 118647641 | E072 | -31988 |
| chr11 | 118647731 | 118647812 | E072 | -31817 |
| chr11 | 118647899 | 118648062 | E072 | -31567 |
| chr11 | 118656490 | 118656726 | E072 | -22903 |
| chr11 | 118656844 | 118657132 | E072 | -22497 |
| chr11 | 118657144 | 118657234 | E072 | -22395 |
| chr11 | 118657488 | 118657733 | E072 | -21896 |
| chr11 | 118657749 | 118657817 | E072 | -21812 |
| chr11 | 118657960 | 118658010 | E072 | -21619 |
| chr11 | 118658284 | 118658342 | E072 | -21287 |
| chr11 | 118658432 | 118658472 | E072 | -21157 |
| chr11 | 118659060 | 118659142 | E072 | -20487 |
| chr11 | 118691100 | 118692101 | E072 | 11471 |
| chr11 | 118641088 | 118641365 | E073 | -38264 |
| chr11 | 118641453 | 118641743 | E073 | -37886 |
| chr11 | 118641773 | 118641877 | E073 | -37752 |
| chr11 | 118643020 | 118643134 | E073 | -36495 |
| chr11 | 118643140 | 118643180 | E073 | -36449 |
| chr11 | 118643221 | 118643289 | E073 | -36340 |
| chr11 | 118643387 | 118643517 | E073 | -36112 |
| chr11 | 118643536 | 118643672 | E073 | -35957 |
| chr11 | 118647261 | 118647311 | E073 | -32318 |
| chr11 | 118647601 | 118647641 | E073 | -31988 |
| chr11 | 118647731 | 118647812 | E073 | -31817 |
| chr11 | 118647899 | 118648062 | E073 | -31567 |
| chr11 | 118651397 | 118651530 | E073 | -28099 |
| chr11 | 118651701 | 118651774 | E073 | -27855 |
| chr11 | 118651920 | 118651970 | E073 | -27659 |
| chr11 | 118653097 | 118653149 | E073 | -26480 |
| chr11 | 118653163 | 118653284 | E073 | -26345 |
| chr11 | 118656844 | 118657132 | E073 | -22497 |
| chr11 | 118657144 | 118657234 | E073 | -22395 |
| chr11 | 118634064 | 118634303 | E074 | -45326 |
| chr11 | 118634727 | 118634791 | E074 | -44838 |
| chr11 | 118639130 | 118639277 | E074 | -40352 |
| chr11 | 118639416 | 118639578 | E074 | -40051 |
| chr11 | 118639582 | 118639673 | E074 | -39956 |
| chr11 | 118639733 | 118639848 | E074 | -39781 |
| chr11 | 118639944 | 118639984 | E074 | -39645 |
| chr11 | 118640074 | 118640261 | E074 | -39368 |
| chr11 | 118641088 | 118641365 | E074 | -38264 |
| chr11 | 118641453 | 118641743 | E074 | -37886 |
| chr11 | 118641773 | 118641877 | E074 | -37752 |
| chr11 | 118641999 | 118642682 | E074 | -36947 |
| chr11 | 118642723 | 118642837 | E074 | -36792 |
| chr11 | 118643020 | 118643134 | E074 | -36495 |
| chr11 | 118643140 | 118643180 | E074 | -36449 |
| chr11 | 118643221 | 118643289 | E074 | -36340 |
| chr11 | 118643387 | 118643517 | E074 | -36112 |
| chr11 | 118643536 | 118643672 | E074 | -35957 |
| chr11 | 118643720 | 118643807 | E074 | -35822 |
| chr11 | 118643919 | 118643969 | E074 | -35660 |
| chr11 | 118653097 | 118653149 | E074 | -26480 |
| chr11 | 118653163 | 118653284 | E074 | -26345 |
| chr11 | 118653468 | 118653518 | E074 | -26111 |
| chr11 | 118653707 | 118653747 | E074 | -25882 |
| chr11 | 118655717 | 118655816 | E074 | -23813 |
| chr11 | 118655903 | 118656002 | E074 | -23627 |
| chr11 | 118656023 | 118656085 | E074 | -23544 |
| chr11 | 118656130 | 118656335 | E074 | -23294 |
| chr11 | 118656490 | 118656726 | E074 | -22903 |
| chr11 | 118656844 | 118657132 | E074 | -22497 |
| chr11 | 118657144 | 118657234 | E074 | -22395 |
| chr11 | 118657488 | 118657733 | E074 | -21896 |
| chr11 | 118657749 | 118657817 | E074 | -21812 |
| chr11 | 118657960 | 118658010 | E074 | -21619 |
| chr11 | 118658640 | 118658692 | E074 | -20937 |
| chr11 | 118658815 | 118658936 | E074 | -20693 |
| chr11 | 118658950 | 118658990 | E074 | -20639 |
| chr11 | 118659060 | 118659142 | E074 | -20487 |
| chr11 | 118691100 | 118692101 | E074 | 11471 |
| chr11 | 118656844 | 118657132 | E081 | -22497 |
| chr11 | 118657144 | 118657234 | E081 | -22395 |
| chr11 | 118657488 | 118657733 | E081 | -21896 |
| chr11 | 118657749 | 118657817 | E081 | -21812 |
| chr11 | 118657960 | 118658010 | E081 | -21619 |
| chr11 | 118658284 | 118658342 | E081 | -21287 |
| chr11 | 118658432 | 118658472 | E081 | -21157 |
| chr11 | 118658640 | 118658692 | E081 | -20937 |
| chr11 | 118658815 | 118658936 | E081 | -20693 |
| chr11 | 118658950 | 118658990 | E081 | -20639 |
| chr11 | 118659060 | 118659142 | E081 | -20487 |
| chr11 | 118653813 | 118653853 | E082 | -25776 |
| chr11 | 118656844 | 118657132 | E082 | -22497 |
| chr11 | 118657144 | 118657234 | E082 | -22395 |
| Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
|---|---|---|---|---|
| chr11 | 118659276 | 118659836 | E067 | -19793 |
| chr11 | 118659987 | 118660037 | E067 | -19592 |
| chr11 | 118660075 | 118664254 | E067 | -15375 |
| chr11 | 118659276 | 118659836 | E068 | -19793 |
| chr11 | 118659987 | 118660037 | E068 | -19592 |
| chr11 | 118660075 | 118664254 | E068 | -15375 |
| chr11 | 118659276 | 118659836 | E069 | -19793 |
| chr11 | 118659987 | 118660037 | E069 | -19592 |
| chr11 | 118660075 | 118664254 | E069 | -15375 |
| chr11 | 118659276 | 118659836 | E070 | -19793 |
| chr11 | 118659987 | 118660037 | E070 | -19592 |
| chr11 | 118660075 | 118664254 | E070 | -15375 |
| chr11 | 118659276 | 118659836 | E071 | -19793 |
| chr11 | 118659987 | 118660037 | E071 | -19592 |
| chr11 | 118660075 | 118664254 | E071 | -15375 |
| chr11 | 118659276 | 118659836 | E072 | -19793 |
| chr11 | 118659987 | 118660037 | E072 | -19592 |
| chr11 | 118660075 | 118664254 | E072 | -15375 |
| chr11 | 118659276 | 118659836 | E073 | -19793 |
| chr11 | 118659987 | 118660037 | E073 | -19592 |
| chr11 | 118660075 | 118664254 | E073 | -15375 |
| chr11 | 118659987 | 118660037 | E074 | -19592 |
| chr11 | 118660075 | 118664254 | E074 | -15375 |
| chr11 | 118660075 | 118664254 | E081 | -15375 |
| chr11 | 118659276 | 118659836 | E082 | -19793 |
| chr11 | 118659987 | 118660037 | E082 | -19592 |
| chr11 | 118660075 | 118664254 | E082 | -15375 |