Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 11 | NC_000011.10:g.73284867G>A |
GRCh37.p13 chr 11 | NC_000011.9:g.72995912G>A |
Molecule type | Change | Amino acid[Codon] | SO Term |
---|---|---|---|
P2RY6 transcript variant 5 | NM_001277204.1:c. | N/A | Intron Variant |
P2RY6 transcript variant 6 | NM_001277205.1:c. | N/A | Intron Variant |
P2RY6 transcript variant 7 | NM_001277206.1:c. | N/A | Intron Variant |
P2RY6 transcript variant 8 | NM_001277207.1:c. | N/A | Intron Variant |
P2RY6 transcript variant 9 | NM_001277208.1:c. | N/A | Intron Variant |
P2RY6 transcript variant 3 | NM_176796.2:c. | N/A | Intron Variant |
P2RY6 transcript variant 1 | NM_176797.2:c. | N/A | Intron Variant |
P2RY6 transcript variant 2 | NM_176798.2:c. | N/A | Intron Variant |
P2RY6 transcript variant X1 | XM_011545076.2:c. | N/A | Intron Variant |
P2RY6 transcript variant X2 | XM_011545077.2:c. | N/A | Intron Variant |
P2RY6 transcript variant X4 | XM_011545079.2:c. | N/A | Intron Variant |
P2RY6 transcript variant X5 | XM_005274022.3:c. | N/A | Genic Upstream Transcript Variant |
P2RY6 transcript variant X3 | XM_006718571.3:c. | N/A | Genic Upstream Transcript Variant |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | G=0.990 | A=0.010 |
1000Genomes | American | Sub | 694 | G=0.920 | A=0.080 |
1000Genomes | East Asian | Sub | 1008 | G=0.755 | A=0.245 |
1000Genomes | Europe | Sub | 1006 | G=0.823 | A=0.177 |
1000Genomes | Global | Study-wide | 5008 | G=0.841 | A=0.159 |
1000Genomes | South Asian | Sub | 978 | G=0.690 | A=0.310 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.855 | A=0.145 |
The Genome Aggregation Database | African | Sub | 8720 | G=0.969 | A=0.031 |
The Genome Aggregation Database | American | Sub | 832 | G=0.900 | A=0.100 |
The Genome Aggregation Database | East Asian | Sub | 1616 | G=0.774 | A=0.226 |
The Genome Aggregation Database | Europe | Sub | 18396 | G=0.822 | A=0.178 |
The Genome Aggregation Database | Global | Study-wide | 29866 | G=0.865 | A=0.135 |
The Genome Aggregation Database | Other | Sub | 302 | G=0.900 | A=0.100 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.886 | A=0.113 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.835 | A=0.165 |
PMID | Title | Author | Journal |
---|---|---|---|
21314694 | Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample. | Kendler KS | Alcohol Clin Exp Res |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs1790063 | 0.000524 | alcohol dependence | 21314694 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr11 | 72999664 | 73000954 | E067 | 3752 |
chr11 | 73000995 | 73001100 | E067 | 5083 |
chr11 | 73025094 | 73027226 | E067 | 29182 |
chr11 | 73027304 | 73027643 | E067 | 31392 |
chr11 | 73027744 | 73027851 | E067 | 31832 |
chr11 | 73028147 | 73028391 | E067 | 32235 |
chr11 | 73028457 | 73028741 | E067 | 32545 |
chr11 | 73028750 | 73029221 | E067 | 32838 |
chr11 | 73029311 | 73029365 | E067 | 33399 |
chr11 | 73029733 | 73029805 | E067 | 33821 |
chr11 | 73029811 | 73029868 | E067 | 33899 |
chr11 | 73031749 | 73031889 | E067 | 35837 |
chr11 | 73031932 | 73032532 | E067 | 36020 |
chr11 | 73032560 | 73034189 | E067 | 36648 |
chr11 | 73037163 | 73037236 | E067 | 41251 |
chr11 | 72951965 | 72952099 | E068 | -43813 |
chr11 | 72953213 | 72954219 | E068 | -41693 |
chr11 | 72998618 | 72998736 | E068 | 2706 |
chr11 | 72998821 | 72998936 | E068 | 2909 |
chr11 | 72998968 | 72999121 | E068 | 3056 |
chr11 | 72999664 | 73000954 | E068 | 3752 |
chr11 | 73000995 | 73001100 | E068 | 5083 |
chr11 | 73025094 | 73027226 | E068 | 29182 |
chr11 | 73027304 | 73027643 | E068 | 31392 |
chr11 | 73027744 | 73027851 | E068 | 31832 |
chr11 | 73028147 | 73028391 | E068 | 32235 |
chr11 | 73028457 | 73028741 | E068 | 32545 |
chr11 | 73028750 | 73029221 | E068 | 32838 |
chr11 | 73029311 | 73029365 | E068 | 33399 |
chr11 | 73029478 | 73029570 | E068 | 33566 |
chr11 | 73029632 | 73029725 | E068 | 33720 |
chr11 | 73029733 | 73029805 | E068 | 33821 |
chr11 | 73029811 | 73029868 | E068 | 33899 |
chr11 | 73029889 | 73030007 | E068 | 33977 |
chr11 | 73030013 | 73030075 | E068 | 34101 |
chr11 | 73030607 | 73030657 | E068 | 34695 |
chr11 | 73030773 | 73030844 | E068 | 34861 |
chr11 | 73030955 | 73031008 | E068 | 35043 |
chr11 | 73031023 | 73031109 | E068 | 35111 |
chr11 | 73031932 | 73032532 | E068 | 36020 |
chr11 | 73032560 | 73034189 | E068 | 36648 |
chr11 | 73034215 | 73035234 | E068 | 38303 |
chr11 | 73035236 | 73035433 | E068 | 39324 |
chr11 | 73035598 | 73035642 | E068 | 39686 |
chr11 | 73035854 | 73036024 | E068 | 39942 |
chr11 | 73037876 | 73037931 | E068 | 41964 |
chr11 | 73037961 | 73038078 | E068 | 42049 |
chr11 | 73038080 | 73038183 | E068 | 42168 |
chr11 | 73038190 | 73039038 | E068 | 42278 |
chr11 | 73041450 | 73041603 | E068 | 45538 |
chr11 | 73041696 | 73043417 | E068 | 45784 |
chr11 | 73044624 | 73044687 | E068 | 48712 |
chr11 | 72951120 | 72951672 | E069 | -44240 |
chr11 | 72951683 | 72951898 | E069 | -44014 |
chr11 | 72969317 | 72969392 | E069 | -26520 |
chr11 | 73000995 | 73001100 | E069 | 5083 |
chr11 | 73017142 | 73018017 | E069 | 21230 |
chr11 | 73025094 | 73027226 | E069 | 29182 |
chr11 | 73027304 | 73027643 | E069 | 31392 |
chr11 | 73027744 | 73027851 | E069 | 31832 |
chr11 | 73028147 | 73028391 | E069 | 32235 |
chr11 | 73028457 | 73028741 | E069 | 32545 |
chr11 | 73028750 | 73029221 | E069 | 32838 |
chr11 | 73029311 | 73029365 | E069 | 33399 |
chr11 | 73029478 | 73029570 | E069 | 33566 |
chr11 | 73029632 | 73029725 | E069 | 33720 |
chr11 | 73029733 | 73029805 | E069 | 33821 |
chr11 | 73029811 | 73029868 | E069 | 33899 |
chr11 | 73029889 | 73030007 | E069 | 33977 |
chr11 | 73030013 | 73030075 | E069 | 34101 |
chr11 | 73030607 | 73030657 | E069 | 34695 |
chr11 | 73030773 | 73030844 | E069 | 34861 |
chr11 | 73030955 | 73031008 | E069 | 35043 |
chr11 | 73031932 | 73032532 | E069 | 36020 |
chr11 | 73032560 | 73034189 | E069 | 36648 |
chr11 | 73034215 | 73035234 | E069 | 38303 |
chr11 | 73035236 | 73035433 | E069 | 39324 |
chr11 | 73035598 | 73035642 | E069 | 39686 |
chr11 | 73036117 | 73037003 | E069 | 40205 |
chr11 | 73038190 | 73039038 | E069 | 42278 |
chr11 | 73041450 | 73041603 | E069 | 45538 |
chr11 | 73041696 | 73043417 | E069 | 45784 |
chr11 | 72953213 | 72954219 | E070 | -41693 |
chr11 | 72955593 | 72955664 | E070 | -40248 |
chr11 | 72955719 | 72956301 | E070 | -39611 |
chr11 | 72956325 | 72956909 | E070 | -39003 |
chr11 | 72956961 | 72957130 | E070 | -38782 |
chr11 | 72998324 | 72998421 | E070 | 2412 |
chr11 | 72998453 | 72998545 | E070 | 2541 |
chr11 | 72998618 | 72998736 | E070 | 2706 |
chr11 | 72998821 | 72998936 | E070 | 2909 |
chr11 | 72998968 | 72999121 | E070 | 3056 |
chr11 | 73025094 | 73027226 | E070 | 29182 |
chr11 | 73027304 | 73027643 | E070 | 31392 |
chr11 | 73027744 | 73027851 | E070 | 31832 |
chr11 | 73028147 | 73028391 | E070 | 32235 |
chr11 | 73028750 | 73029221 | E070 | 32838 |
chr11 | 73032560 | 73034189 | E070 | 36648 |
chr11 | 73034215 | 73035234 | E070 | 38303 |
chr11 | 73035236 | 73035433 | E070 | 39324 |
chr11 | 73041450 | 73041603 | E070 | 45538 |
chr11 | 72951683 | 72951898 | E071 | -44014 |
chr11 | 72951965 | 72952099 | E071 | -43813 |
chr11 | 72969317 | 72969392 | E071 | -26520 |
chr11 | 72969421 | 72969530 | E071 | -26382 |
chr11 | 72969612 | 72969662 | E071 | -26250 |
chr11 | 72998453 | 72998545 | E071 | 2541 |
chr11 | 72999143 | 72999649 | E071 | 3231 |
chr11 | 72999664 | 73000954 | E071 | 3752 |
chr11 | 73017142 | 73018017 | E071 | 21230 |
chr11 | 73027304 | 73027643 | E071 | 31392 |
chr11 | 73027744 | 73027851 | E071 | 31832 |
chr11 | 73028147 | 73028391 | E071 | 32235 |
chr11 | 73028457 | 73028741 | E071 | 32545 |
chr11 | 73028750 | 73029221 | E071 | 32838 |
chr11 | 73029311 | 73029365 | E071 | 33399 |
chr11 | 73029478 | 73029570 | E071 | 33566 |
chr11 | 73029632 | 73029725 | E071 | 33720 |
chr11 | 73029733 | 73029805 | E071 | 33821 |
chr11 | 73029811 | 73029868 | E071 | 33899 |
chr11 | 73029889 | 73030007 | E071 | 33977 |
chr11 | 73030013 | 73030075 | E071 | 34101 |
chr11 | 73030607 | 73030657 | E071 | 34695 |
chr11 | 73030773 | 73030844 | E071 | 34861 |
chr11 | 73030955 | 73031008 | E071 | 35043 |
chr11 | 73031023 | 73031109 | E071 | 35111 |
chr11 | 73031231 | 73031295 | E071 | 35319 |
chr11 | 73031932 | 73032532 | E071 | 36020 |
chr11 | 73032560 | 73034189 | E071 | 36648 |
chr11 | 73034215 | 73035234 | E071 | 38303 |
chr11 | 73035236 | 73035433 | E071 | 39324 |
chr11 | 73035598 | 73035642 | E071 | 39686 |
chr11 | 73035854 | 73036024 | E071 | 39942 |
chr11 | 73036117 | 73037003 | E071 | 40205 |
chr11 | 73037163 | 73037236 | E071 | 41251 |
chr11 | 73040874 | 73040971 | E071 | 44962 |
chr11 | 73041118 | 73041387 | E071 | 45206 |
chr11 | 73041450 | 73041603 | E071 | 45538 |
chr11 | 73041696 | 73043417 | E071 | 45784 |
chr11 | 73043420 | 73044224 | E071 | 47508 |
chr11 | 73044624 | 73044687 | E071 | 48712 |
chr11 | 72969317 | 72969392 | E072 | -26520 |
chr11 | 72969421 | 72969530 | E072 | -26382 |
chr11 | 72999664 | 73000954 | E072 | 3752 |
chr11 | 73000995 | 73001100 | E072 | 5083 |
chr11 | 73025094 | 73027226 | E072 | 29182 |
chr11 | 73027304 | 73027643 | E072 | 31392 |
chr11 | 73027744 | 73027851 | E072 | 31832 |
chr11 | 73028147 | 73028391 | E072 | 32235 |
chr11 | 73028457 | 73028741 | E072 | 32545 |
chr11 | 73028750 | 73029221 | E072 | 32838 |
chr11 | 73029311 | 73029365 | E072 | 33399 |
chr11 | 73029478 | 73029570 | E072 | 33566 |
chr11 | 73031749 | 73031889 | E072 | 35837 |
chr11 | 73031932 | 73032532 | E072 | 36020 |
chr11 | 73032560 | 73034189 | E072 | 36648 |
chr11 | 73034215 | 73035234 | E072 | 38303 |
chr11 | 73035236 | 73035433 | E072 | 39324 |
chr11 | 73035598 | 73035642 | E072 | 39686 |
chr11 | 73035854 | 73036024 | E072 | 39942 |
chr11 | 73036117 | 73037003 | E072 | 40205 |
chr11 | 73037163 | 73037236 | E072 | 41251 |
chr11 | 73037876 | 73037931 | E072 | 41964 |
chr11 | 73037961 | 73038078 | E072 | 42049 |
chr11 | 73038080 | 73038183 | E072 | 42168 |
chr11 | 73038190 | 73039038 | E072 | 42278 |
chr11 | 72951120 | 72951672 | E073 | -44240 |
chr11 | 72951683 | 72951898 | E073 | -44014 |
chr11 | 72982713 | 72983652 | E073 | -12260 |
chr11 | 73000995 | 73001100 | E073 | 5083 |
chr11 | 73025094 | 73027226 | E073 | 29182 |
chr11 | 73027304 | 73027643 | E073 | 31392 |
chr11 | 73027744 | 73027851 | E073 | 31832 |
chr11 | 73028147 | 73028391 | E073 | 32235 |
chr11 | 73028457 | 73028741 | E073 | 32545 |
chr11 | 73028750 | 73029221 | E073 | 32838 |
chr11 | 73029311 | 73029365 | E073 | 33399 |
chr11 | 73029478 | 73029570 | E073 | 33566 |
chr11 | 73029632 | 73029725 | E073 | 33720 |
chr11 | 73029733 | 73029805 | E073 | 33821 |
chr11 | 73029811 | 73029868 | E073 | 33899 |
chr11 | 73029889 | 73030007 | E073 | 33977 |
chr11 | 73030013 | 73030075 | E073 | 34101 |
chr11 | 73030607 | 73030657 | E073 | 34695 |
chr11 | 73030773 | 73030844 | E073 | 34861 |
chr11 | 73030955 | 73031008 | E073 | 35043 |
chr11 | 73031023 | 73031109 | E073 | 35111 |
chr11 | 73031231 | 73031295 | E073 | 35319 |
chr11 | 73031749 | 73031889 | E073 | 35837 |
chr11 | 73031932 | 73032532 | E073 | 36020 |
chr11 | 73032560 | 73034189 | E073 | 36648 |
chr11 | 73034215 | 73035234 | E073 | 38303 |
chr11 | 73035236 | 73035433 | E073 | 39324 |
chr11 | 73035598 | 73035642 | E073 | 39686 |
chr11 | 73035854 | 73036024 | E073 | 39942 |
chr11 | 73036117 | 73037003 | E073 | 40205 |
chr11 | 73037163 | 73037236 | E073 | 41251 |
chr11 | 73037876 | 73037931 | E073 | 41964 |
chr11 | 73037961 | 73038078 | E073 | 42049 |
chr11 | 73038080 | 73038183 | E073 | 42168 |
chr11 | 73041696 | 73043417 | E073 | 45784 |
chr11 | 73044238 | 73044570 | E073 | 48326 |
chr11 | 73044624 | 73044687 | E073 | 48712 |
chr11 | 72953213 | 72954219 | E074 | -41693 |
chr11 | 72968345 | 72969315 | E074 | -26597 |
chr11 | 72969317 | 72969392 | E074 | -26520 |
chr11 | 72969421 | 72969530 | E074 | -26382 |
chr11 | 72998821 | 72998936 | E074 | 2909 |
chr11 | 72999664 | 73000954 | E074 | 3752 |
chr11 | 73000995 | 73001100 | E074 | 5083 |
chr11 | 73025094 | 73027226 | E074 | 29182 |
chr11 | 73027304 | 73027643 | E074 | 31392 |
chr11 | 73027744 | 73027851 | E074 | 31832 |
chr11 | 73028147 | 73028391 | E074 | 32235 |
chr11 | 73028457 | 73028741 | E074 | 32545 |
chr11 | 73028750 | 73029221 | E074 | 32838 |
chr11 | 73029311 | 73029365 | E074 | 33399 |
chr11 | 73029478 | 73029570 | E074 | 33566 |
chr11 | 73029632 | 73029725 | E074 | 33720 |
chr11 | 73029733 | 73029805 | E074 | 33821 |
chr11 | 73029811 | 73029868 | E074 | 33899 |
chr11 | 73029889 | 73030007 | E074 | 33977 |
chr11 | 73030013 | 73030075 | E074 | 34101 |
chr11 | 73030607 | 73030657 | E074 | 34695 |
chr11 | 73030773 | 73030844 | E074 | 34861 |
chr11 | 73030955 | 73031008 | E074 | 35043 |
chr11 | 73031023 | 73031109 | E074 | 35111 |
chr11 | 73031231 | 73031295 | E074 | 35319 |
chr11 | 73032560 | 73034189 | E074 | 36648 |
chr11 | 73034215 | 73035234 | E074 | 38303 |
chr11 | 73035236 | 73035433 | E074 | 39324 |
chr11 | 73035598 | 73035642 | E074 | 39686 |
chr11 | 73035854 | 73036024 | E074 | 39942 |
chr11 | 73036117 | 73037003 | E074 | 40205 |
chr11 | 73037163 | 73037236 | E074 | 41251 |
chr11 | 73037876 | 73037931 | E074 | 41964 |
chr11 | 73037961 | 73038078 | E074 | 42049 |
chr11 | 73038080 | 73038183 | E074 | 42168 |
chr11 | 73038190 | 73039038 | E074 | 42278 |
chr11 | 73041450 | 73041603 | E074 | 45538 |
chr11 | 73041696 | 73043417 | E074 | 45784 |
chr11 | 72953213 | 72954219 | E081 | -41693 |
chr11 | 72984109 | 72984669 | E081 | -11243 |
chr11 | 73025094 | 73027226 | E081 | 29182 |
chr11 | 73027304 | 73027643 | E081 | 31392 |
chr11 | 73027744 | 73027851 | E081 | 31832 |
chr11 | 73028147 | 73028391 | E081 | 32235 |
chr11 | 73028457 | 73028741 | E081 | 32545 |
chr11 | 73028750 | 73029221 | E081 | 32838 |
chr11 | 73029311 | 73029365 | E081 | 33399 |
chr11 | 73029478 | 73029570 | E081 | 33566 |
chr11 | 73032560 | 73034189 | E081 | 36648 |
chr11 | 73034215 | 73035234 | E081 | 38303 |
chr11 | 73025094 | 73027226 | E082 | 29182 |
chr11 | 73027304 | 73027643 | E082 | 31392 |
chr11 | 73028147 | 73028391 | E082 | 32235 |
chr11 | 73028457 | 73028741 | E082 | 32545 |
chr11 | 73028750 | 73029221 | E082 | 32838 |
chr11 | 73029311 | 73029365 | E082 | 33399 |
chr11 | 73029478 | 73029570 | E082 | 33566 |
chr11 | 73029632 | 73029725 | E082 | 33720 |
chr11 | 73029733 | 73029805 | E082 | 33821 |
chr11 | 73029811 | 73029868 | E082 | 33899 |
chr11 | 73029889 | 73030007 | E082 | 33977 |
chr11 | 73030013 | 73030075 | E082 | 34101 |
chr11 | 73032560 | 73034189 | E082 | 36648 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr11 | 73018020 | 73021777 | E067 | 22108 |
chr11 | 73018020 | 73021777 | E068 | 22108 |
chr11 | 73018020 | 73021777 | E069 | 22108 |
chr11 | 73018020 | 73021777 | E070 | 22108 |
chr11 | 72983917 | 72983981 | E071 | -11931 |
chr11 | 73018020 | 73021777 | E071 | 22108 |
chr11 | 73018020 | 73021777 | E072 | 22108 |
chr11 | 73018020 | 73021777 | E073 | 22108 |
chr11 | 73018020 | 73021777 | E074 | 22108 |
chr11 | 73018020 | 73021777 | E082 | 22108 |