rs184497

Homo sapiens
T>C
None
Check p-value
SNV (Single Nucleotide Variation)
T==0471 (14084/29870,GnomAD)
C=0497 (14480/29118,TOPMED)
T==0471 (2358/5008,1000G)
T==0439 (1693/3854,ALSPAC)
T==0420 (1558/3708,TWINSUK)
chr5:119617824 (GRCh38.p7) (5q23.1)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
2 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 5NC_000005.10:g.119617824T>C
GRCh37.p13 chr 5NC_000005.9:g.118953519T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.554C=0.446
1000GenomesAmericanSub694T=0.500C=0.500
1000GenomesEast AsianSub1008T=0.457C=0.543
1000GenomesEuropeSub1006T=0.436C=0.564
1000GenomesGlobalStudy-wide5008T=0.471C=0.529
1000GenomesSouth AsianSub978T=0.390C=0.610
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.439C=0.561
The Genome Aggregation DatabaseAfricanSub8700T=0.553C=0.447
The Genome Aggregation DatabaseAmericanSub836T=0.490C=0.510
The Genome Aggregation DatabaseEast AsianSub1602T=0.451C=0.549
The Genome Aggregation DatabaseEuropeSub18430T=0.435C=0.564
The Genome Aggregation DatabaseGlobalStudy-wide29870T=0.471C=0.528
The Genome Aggregation DatabaseOtherSub302T=0.370C=0.630
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.502C=0.497
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.420C=0.580
PMID Title Author Journal

P-Value

SNP ID p-value Traits Study
rs1844976.86E-05alcoholismpha002893

eQTL of rs184497 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs184497 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr5118966530118966695E07113011
chr5118966530118966695E07413011