SNP Detail Info-rs1868152

Organism: Homo sapiens

Alleles: A>G / A>T

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

A==0144 (4328/29932,GnomAD)
A==0157 (4575/29118,TOPMED)
A==0144 (723/5008,1000G)
A==0129 (496/3854,ALSPAC)
A==0135 (502/3708,TWINSUK)

Position: chr3:186502274 (GRCh38.p7) (3q27.3)

Phenotype: AD | ND

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.225	G=0.775
1000Genomes	American	Sub	694	A=0.130	G=0.870
1000Genomes	East Asian	Sub	1008	A=0.086	G=0.914
1000Genomes	Europe	Sub	1006	A=0.119	G=0.881
1000Genomes	Global	Study-wide	5008	A=0.144	G=0.856
1000Genomes	South Asian	Sub	978	A=0.130	G=0.870
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.129	G=0.871
The Genome Aggregation Database	African	Sub	8694	A=0.210	G=0.790
The Genome Aggregation Database	American	Sub	838	A=0.100	G=0.900
The Genome Aggregation Database	East Asian	Sub	1622	A=0.062	G=0.938
The Genome Aggregation Database	Europe	Sub	18476	A=0.124	G=0.875
The Genome Aggregation Database	Global	Study-wide	29932	A=0.144	G=0.855
The Genome Aggregation Database	Other	Sub	302	A=0.100	G=0.900
Trans-Omics for Precision Medicine	Global	Study-wide	29118	A=0.157	G=0.842
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.135	G=0.865

PMID	Title	Author	Journal
23942779	A genome-wide association study of behavioral disinhibition.	McGue M	Behav Genet

SNP ID	p-value	Traits	Study
rs1868152	0.00022	nicotine use	23942779
rs1868152	0.0007	alcohol consumption	23942779

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs1868152