rs1882051

Homo sapiens
T>A / T>C
None
Check p-value
SNV (Single Nucleotide Variation)
A=0111 (3355/29972,GnomAD)
A=0088 (2587/29100,TOPMED)
A=0053 (263/5008,1000G)
chr7:36064656 (GRCh38.p7) (7p14.2)
AD
GWASdb2
1   publication(s)
See rs on genome
95 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 7NC_000007.14:g.36064656T>A
GRCh38.p7 chr 7NC_000007.14:g.36064656T>C
GRCh37.p13 chr 7NC_000007.13:g.36104266T>A
GRCh37.p13 chr 7NC_000007.13:g.36104266T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.936C=0.055
1000GenomesAmericanSub694T=0.900C=0.01,
1000GenomesEast AsianSub1008T=0.999C=0.000
1000GenomesEuropeSub1006T=0.842C=0.000
1000GenomesGlobalStudy-wide5008T=0.931C=0.016
1000GenomesSouth AsianSub978T=0.970C=0.00,
The Genome Aggregation DatabaseAfricanSub8710T=0.924C=0.048
The Genome Aggregation DatabaseAmericanSub838T=0.910C=0.00,
The Genome Aggregation DatabaseEast AsianSub1622T=1.000C=0.000
The Genome Aggregation DatabaseEuropeSub18500T=0.838C=0.000
The Genome Aggregation DatabaseGlobalStudy-wide29972T=0.874C=0.014
The Genome Aggregation DatabaseOtherSub302T=0.870C=0.00,
Trans-Omics for Precision MedicineGlobalStudy-wide29100T=0.911A=0.088
PMID Title Author Journal

P-Value

SNP ID p-value Traits Study
rs18820513.55E-10alcohol consumptionpha001402

eQTL of rs1882051 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs1882051 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr76964377069644209E067-40805
chr76964377069644209E068-40805
chr76964432069644406E068-40608
chr76964448669644536E068-40478
chr76964432069644406E069-40608
chr76964448669644536E069-40478
chr76970252469703624E06917510
chr76971954969719603E06934535
chr76971969469719885E06934680
chr76963839169638479E070-46535
chr76967509269675142E070-9872
chr76967517369675294E070-9720
chr76967529669675375E070-9639
chr76968269969682779E070-2235
chr76968295569683038E070-1976
chr76968353169683867E070-1147
chr76970252469703624E07017510
chr76970378669703846E07018772
chr76970683469707000E07021820
chr76970760369707653E07022589
chr76970779369708145E07022779
chr76964377069644209E071-40805
chr76964432069644406E071-40608
chr76964448669644536E071-40478
chr76968269969682779E071-2235
chr76968295569683038E071-1976
chr76969553969695593E07110525
chr76969575969695803E07110745
chr76970683469707000E07121820
chr76970760369707653E07122589
chr76973233869732606E07147324
chr76964432069644406E072-40608
chr76964448669644536E072-40478
chr76964471369645041E072-39973
chr76964549969645549E072-39465
chr76964556269645612E072-39402
chr76964561969645671E072-39343
chr76973233869732606E07247324
chr76973281769732969E07247803
chr76972440169724475E07339387
chr76972453869724936E07339524
chr76964432069644406E074-40608
chr76964448669644536E074-40478
chr76968269969682779E074-2235
chr76968295569683038E074-1976
chr76967509269675142E081-9872
chr76967517369675294E081-9720
chr76967529669675375E081-9639
chr76967580669675846E081-9168
chr76967600869676195E081-8819
chr76967630669676348E081-8666
chr76967690269676952E081-8062
chr76967713169677785E081-7229
chr76967823469678365E081-6649
chr76967840369678476E081-6538
chr76967860969678659E081-6355
chr76967888569679656E081-5358
chr76968353169683867E081-1147
chr76970252469703624E08117510
chr76970378669703846E08118772
chr76970655069706821E08121536
chr76970683469707000E08121820
chr76970760369707653E08122589
chr76970779369708145E08122779
chr76970854669708787E08123532
chr76972307569723268E08138061
chr76972350569723559E08138491
chr76972440169724475E08139387
chr76972453869724936E08139524
chr76972519569725301E08140181
chr76972555169725640E08140537
chr76967509269675142E082-9872
chr76967517369675294E082-9720
chr76967529669675375E082-9639
chr76967580669675846E082-9168
chr76967600869676195E082-8819
chr76967630669676348E082-8666
chr76967690269676952E082-8062
chr76967713169677785E082-7229
chr76968295569683038E082-1976
chr76968353169683867E082-1147
chr76970252469703624E08217510
chr76970378669703846E08218772
chr76970683469707000E08221820
chr76970760369707653E08222589
chr76970779369708145E08222779
chr76970854669708787E08223532
chr76973186069731916E08246846
chr76973197569732025E08246961
chr76973216469732256E08247150
chr76973233869732606E08247324
chr76973281769732969E08247803
chr76973305169733154E08248037
chr76973319569733245E08248181
chr76973335269733407E08248338