SNP Detail Info-rs1886682

Variant Details Frequency Publications p-values eSNP meSNP

Genomic Coordinates

Sequence Name	Change(s)
GRCh38.p7 chr 1	NC_000001.11:g.92511718A>G
GRCh38.p7 chr 1	NC_000001.11:g.92511718A>T
GRCh37.p13 chr 1	NC_000001.10:g.92977275A>G
GRCh37.p13 chr 1	NC_000001.10:g.92977275A>T

Gene: EVI5, ecotropic viral integration site 5(minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
EVI5 transcript variant 1	NM_001308248.1:c.	N/A	3 Prime UTR Variant
EVI5 transcript variant 2	NM_005665.5:c.	N/A	3 Prime UTR Variant
EVI5 transcript variant X4	XM_017002272.1:c.	N/A	3 Prime UTR Variant
EVI5 transcript variant X1	XM_017002269.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X2	XM_017002270.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X3	XM_017002271.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X5	XM_017002273.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X6	XM_017002274.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X7	XM_017002275.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X8	XM_017002276.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X10	XM_017002277.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X11	XM_017002278.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X12	XM_017002279.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X12	XM_017002280.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X13	XM_017002281.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X16	XM_017002282.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X17	XM_017002283.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X16	XM_017002284.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X17	XM_017002285.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X18	XM_017002286.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X19	XM_017002287.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X21	XM_017002288.1:c.	N/A	Genic Downstream Transcript Variant
EVI5 transcript variant X22	XR_001737401.1:n.	N/A	Genic Downstream Transcript Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.049	G=0.951
1000Genomes	American	Sub	694	A=0.110	G=0.890
1000Genomes	East Asian	Sub	1008	A=0.027	G=0.973
1000Genomes	Europe	Sub	1006	A=0.193	G=0.807
1000Genomes	Global	Study-wide	5008	A=0.080	G=0.920
1000Genomes	South Asian	Sub	978	A=0.040	G=0.960
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.209	G=0.791
The Genome Aggregation Database	African	Sub	8722	A=0.073	G=0.927
The Genome Aggregation Database	American	Sub	838	A=0.090	G=0.910
The Genome Aggregation Database	East Asian	Sub	1620	A=0.035	G=0.965
The Genome Aggregation Database	Europe	Sub	18460	A=0.196	G=0.803
The Genome Aggregation Database	Global	Study-wide	29942	A=0.147	G=0.852
The Genome Aggregation Database	Other	Sub	302	A=0.090	G=0.910
Trans-Omics for Precision Medicine	Global	Study-wide	29118	A=0.132	G=0.867
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.206	G=0.794

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr1	82691538	82692114	E068	-5978
chr1	82651937	82652007	E070	-46085
chr1	82663359	82663560	E070	-34532
chr1	82680033	82681879	E070	-16213
chr1	82691538	82692114	E070	-5978
chr1	82691053	82691517	E071	-6575
chr1	82691538	82692114	E071	-5978
chr1	82663359	82663560	E081	-34532
chr1	82664577	82664727	E081	-33365
chr1	82664729	82664837	E081	-33255
chr1	82680033	82681879	E081	-16213
chr1	82677156	82677421	E082	-20671

rs1886682

Genomic Coordinates

Gene: EVI5, ecotropic viral integration site 5(minus strand)

Population Frequency

P-Value

eQTL of rs1886682 in Brain tissues (GTEx Analysis Release V7)

meQTL of rs1886682 in Fetal Brain

Genomic View

Chromatin Interaction

Enhancer Annotation (GRCh37.p13)