rs1932011

Homo sapiens
A>C
None
Check p-value
SNV (Single Nucleotide Variation)
A==0343 (10250/29864,GnomAD)
A==0321 (9363/29118,TOPMED)
A==0235 (1178/5008,1000G)
A==0428 (1649/3854,ALSPAC)
A==0443 (1644/3708,TWINSUK)
chr10:53597376 (GRCh38.p7) (10q21.1)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 10NC_000010.11:g.53597376A>C
GRCh37.p13 chr 10NC_000010.10:g.55357136A>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.185C=0.815
1000GenomesAmericanSub694A=0.360C=0.640
1000GenomesEast AsianSub1008A=0.067C=0.933
1000GenomesEuropeSub1006A=0.419C=0.581
1000GenomesGlobalStudy-wide5008A=0.235C=0.765
1000GenomesSouth AsianSub978A=0.200C=0.800
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.428C=0.572
The Genome Aggregation DatabaseAfricanSub8694A=0.225C=0.775
The Genome Aggregation DatabaseAmericanSub836A=0.350C=0.650
The Genome Aggregation DatabaseEast AsianSub1612A=0.051C=0.949
The Genome Aggregation DatabaseEuropeSub18420A=0.422C=0.577
The Genome Aggregation DatabaseGlobalStudy-wide29864A=0.343C=0.656
The Genome Aggregation DatabaseOtherSub302A=0.450C=0.550
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.321C=0.678
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.443C=0.557
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs19320110.0000849alcoholismpha002891
rs19320110.0000849alcohol dependence20201924

eQTL of rs1932011 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs1932011 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.