rs200589189

Organism: Homo sapiens

Alleles: insG

Gene : Feature

None

p-value: Check p-value

Variation Type: Insertion

Frequency:

None (

Position: chr1:62918621-62918622 (GRCh38.p7) (1p31.3)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 24 Enhancers around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 1	NC_000001.11:g.62918621_62918622insG
GRCh37.p13 chr 1	NC_000001.10:g.63384292_63384293insG

Study	Population	Group	Sample #	Ref Allele	Alt Allele

PMID	Title	Author	Journal
21314694	Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.	Kendler KS	Alcohol Clin Exp Res

SNP ID	p-value	Traits	Study
rs200589189	0.000143	alcohol dependence	21314694

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

There is no significant Hi-C chromatin interaction data for this SNP.

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr1	63347718	63348520	E067	-35772
chr1	63340700	63340800	E069	-43492
chr1	63341475	63341735	E069	-42557
chr1	63341475	63341735	E070	-42557
chr1	63347718	63348520	E070	-35772
chr1	63370274	63370577	E070	-13715
chr1	63419369	63419565	E070	35077
chr1	63419608	63419699	E070	35316
chr1	63340700	63340800	E071	-43492
chr1	63341475	63341735	E071	-42557
chr1	63342912	63343180	E071	-41112
chr1	63347718	63348520	E071	-35772
chr1	63340700	63340800	E072	-43492
chr1	63341475	63341735	E072	-42557
chr1	63342912	63343180	E072	-41112
chr1	63347718	63348520	E072	-35772
chr1	63340700	63340800	E074	-43492
chr1	63341475	63341735	E074	-42557
chr1	63347718	63348520	E074	-35772
chr1	63357771	63358124	E074	-26168
chr1	63347718	63348520	E081	-35772
chr1	63370274	63370577	E081	-13715
chr1	63419369	63419565	E081	35077
chr1	63419608	63419699	E081	35316