rs2117099

Organism: Homo sapiens

Alleles: G>A

Gene : Feature

PTPRD : Intron Variant

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

A=0155 (4615/29676,GnomAD)
A=0240 (7005/29118,TOPMED)
A=0163 (815/5008,1000G)
A=0036 (137/3854,ALSPAC)
A=0036 (132/3708,TWINSUK)

Position: chr9:8847233 (GRCh38.p7) (9p24.1)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 724 Enhancers around

Promoter: 69 Promoters around

Variant Details Frequency Publications p-values eSNP meSNP

Genomic Coordinates

Sequence Name	Change(s)
GRCh38.p7 chr 9	NC_000009.12:g.8847233G>A
GRCh37.p13 chr 9	NC_000009.11:g.8847233G>A
PTPRD RefSeqGene	NG_033963.1:g.1770491C>T

Gene: PTPRD, protein tyrosine phosphatase, receptor type D(minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
PTPRD transcript variant 1	NM_002839.3:c.	N/A	Intron Variant
PTPRD transcript variant 5	NM_001040712.2:c.	N/A	Genic Upstream Transcript Variant
PTPRD transcript variant 6	NM_001171025.1:c.	N/A	Genic Upstream Transcript Variant
PTPRD transcript variant 2	NM_130391.3:c.	N/A	Genic Upstream Transcript Variant
PTPRD transcript variant 3	NM_130392.3:c.	N/A	Genic Upstream Transcript Variant
PTPRD transcript variant 4	NM_130393.3:c.	N/A	Genic Upstream Transcript Variant
PTPRD transcript variant X10	XM_006716817.3:c.	N/A	Intron Variant
PTPRD transcript variant X24	XM_006716823.2:c.	N/A	Intron Variant
PTPRD transcript variant X26	XM_006716825.3:c.	N/A	Intron Variant
PTPRD transcript variant X28	XM_006716827.3:c.	N/A	Intron Variant
PTPRD transcript variant X40	XM_006716832.3:c.	N/A	Intron Variant
PTPRD transcript variant X41	XM_006716833.3:c.	N/A	Intron Variant
PTPRD transcript variant X42	XM_006716834.3:c.	N/A	Intron Variant
PTPRD transcript variant X45	XM_006716835.3:c.	N/A	Intron Variant
PTPRD transcript variant X48	XM_006716837.3:c.	N/A	Intron Variant
PTPRD transcript variant X49	XM_006716838.3:c.	N/A	Intron Variant
PTPRD transcript variant X50	XM_006716839.3:c.	N/A	Intron Variant
PTPRD transcript variant X25	XM_011517992.2:c.	N/A	Intron Variant
PTPRD transcript variant X1	XM_017014958.1:c.	N/A	Intron Variant
PTPRD transcript variant X2	XM_017014959.1:c.	N/A	Intron Variant
PTPRD transcript variant X3	XM_017014960.1:c.	N/A	Intron Variant
PTPRD transcript variant X4	XM_017014961.1:c.	N/A	Intron Variant
PTPRD transcript variant X5	XM_017014962.1:c.	N/A	Intron Variant
PTPRD transcript variant X6	XM_017014963.1:c.	N/A	Intron Variant
PTPRD transcript variant X7	XM_017014964.1:c.	N/A	Intron Variant
PTPRD transcript variant X8	XM_017014965.1:c.	N/A	Intron Variant
PTPRD transcript variant X9	XM_017014966.1:c.	N/A	Intron Variant
PTPRD transcript variant X11	XM_017014967.1:c.	N/A	Intron Variant
PTPRD transcript variant X12	XM_017014968.1:c.	N/A	Intron Variant
PTPRD transcript variant X13	XM_017014969.1:c.	N/A	Intron Variant
PTPRD transcript variant X14	XM_017014970.1:c.	N/A	Intron Variant
PTPRD transcript variant X15	XM_017014971.1:c.	N/A	Intron Variant
PTPRD transcript variant X16	XM_017014972.1:c.	N/A	Intron Variant
PTPRD transcript variant X17	XM_017014973.1:c.	N/A	Intron Variant
PTPRD transcript variant X18	XM_017014974.1:c.	N/A	Intron Variant
PTPRD transcript variant X19	XM_017014975.1:c.	N/A	Intron Variant
PTPRD transcript variant X20	XM_017014976.1:c.	N/A	Intron Variant
PTPRD transcript variant X21	XM_017014977.1:c.	N/A	Intron Variant
PTPRD transcript variant X22	XM_017014978.1:c.	N/A	Intron Variant
PTPRD transcript variant X23	XM_017014979.1:c.	N/A	Intron Variant
PTPRD transcript variant X27	XM_017014980.1:c.	N/A	Intron Variant
PTPRD transcript variant X29	XM_017014981.1:c.	N/A	Intron Variant
PTPRD transcript variant X30	XM_017014982.1:c.	N/A	Intron Variant
PTPRD transcript variant X31	XM_017014983.1:c.	N/A	Intron Variant
PTPRD transcript variant X32	XM_017014984.1:c.	N/A	Intron Variant
PTPRD transcript variant X33	XM_017014985.1:c.	N/A	Intron Variant
PTPRD transcript variant X34	XM_017014986.1:c.	N/A	Intron Variant
PTPRD transcript variant X35	XM_017014987.1:c.	N/A	Intron Variant
PTPRD transcript variant X36	XM_017014988.1:c.	N/A	Intron Variant
PTPRD transcript variant X37	XM_017014989.1:c.	N/A	Intron Variant
PTPRD transcript variant X38	XM_017014990.1:c.	N/A	Intron Variant
PTPRD transcript variant X39	XM_017014991.1:c.	N/A	Intron Variant
PTPRD transcript variant X43	XM_017014992.1:c.	N/A	Intron Variant
PTPRD transcript variant X44	XM_017014993.1:c.	N/A	Intron Variant
PTPRD transcript variant X46	XM_017014994.1:c.	N/A	Intron Variant
PTPRD transcript variant X47	XM_017014995.1:c.	N/A	Intron Variant

Population Frequency

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	G=0.463	A=0.537
1000Genomes	American	Sub	694	G=0.910	A=0.090
1000Genomes	East Asian	Sub	1008	G=0.997	A=0.003
1000Genomes	Europe	Sub	1006	G=0.965	A=0.035
1000Genomes	Global	Study-wide	5008	G=0.837	A=0.163
1000Genomes	South Asian	Sub	978	G=1.000	A=0.000
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.964	A=0.036
The Genome Aggregation Database	African	Sub	8656	G=0.546	A=0.454
The Genome Aggregation Database	American	Sub	820	G=0.940	A=0.060
The Genome Aggregation Database	East Asian	Sub	1610	G=0.997	A=0.003
The Genome Aggregation Database	Europe	Sub	18292	G=0.966	A=0.033
The Genome Aggregation Database	Global	Study-wide	29676	G=0.844	A=0.155
The Genome Aggregation Database	Other	Sub	298	G=0.950	A=0.050
Trans-Omics for Precision Medicine	Global	Study-wide	29118	G=0.759	A=0.240
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.964	A=0.036

PMID	Title	Author	Journal
20201924	Genome-wide association study of alcohol dependence implicates a region on chromosome 11.	Edenberg HJ	Alcohol Clin Exp Res

P-Value

SNP ID	p-value	Traits	Study
rs2117099	0.00018	alcohol dependence(early age of onset)	20201924
rs2117099	0.00049	alcohol dependence	20201924

eQTL of rs2117099 in Brain tissues (GTEx Analysis Release V7)

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

meQTL of rs2117099 in Fetal Brain

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr9	8797699	8797749	E067	-49484
chr9	8798860	8798982	E067	-48251
chr9	8799053	8799113	E067	-48120
chr9	8799222	8799313	E067	-47920
chr9	8799315	8799538	E067	-47695
chr9	8799573	8799689	E067	-47544
chr9	8799808	8799949	E067	-47284
chr9	8800066	8800123	E067	-47110
chr9	8800153	8800977	E067	-46256
chr9	8808076	8808138	E067	-39095
chr9	8814466	8814776	E067	-32457
chr9	8814966	8815016	E067	-32217
chr9	8815265	8815309	E067	-31924
chr9	8815353	8815476	E067	-31757
chr9	8815579	8815680	E067	-31553
chr9	8815898	8816824	E067	-30409
chr9	8816878	8817041	E067	-30192
chr9	8817089	8817169	E067	-30064
chr9	8817188	8817285	E067	-29948
chr9	8817492	8817618	E067	-29615
chr9	8822406	8822513	E067	-24720
chr9	8822700	8822915	E067	-24318
chr9	8822983	8823075	E067	-24158
chr9	8823094	8823144	E067	-24089
chr9	8823362	8823465	E067	-23768
chr9	8823500	8823572	E067	-23661
chr9	8824061	8824309	E067	-22924
chr9	8828441	8828491	E067	-18742
chr9	8829246	8829296	E067	-17937
chr9	8829307	8829367	E067	-17866
chr9	8832857	8832926	E067	-14307
chr9	8833051	8833260	E067	-13973
chr9	8833268	8833375	E067	-13858
chr9	8840887	8841003	E067	-6230
chr9	8841025	8841075	E067	-6158
chr9	8841318	8841375	E067	-5858
chr9	8842588	8842673	E067	-4560
chr9	8842716	8842787	E067	-4446
chr9	8842826	8843252	E067	-3981
chr9	8843425	8843475	E067	-3758
chr9	8843767	8843817	E067	-3416
chr9	8845044	8845124	E067	-2109
chr9	8846581	8846704	E067	-529
chr9	8846892	8846957	E067	-276
chr9	8847646	8847811	E067	413
chr9	8847844	8848164	E067	611
chr9	8850797	8851201	E067	3564
chr9	8851436	8851576	E067	4203
chr9	8852877	8852996	E067	5644
chr9	8853216	8853351	E067	5983
chr9	8853428	8853647	E067	6195
chr9	8853671	8853924	E067	6438
chr9	8859932	8860050	E067	12699
chr9	8860178	8860477	E067	12945
chr9	8860579	8860680	E067	13346
chr9	8860850	8860926	E067	13617
chr9	8860929	8861393	E067	13696
chr9	8864009	8864567	E067	16776
chr9	8864596	8864780	E067	17363
chr9	8867299	8867478	E067	20066
chr9	8869671	8869939	E067	22438
chr9	8869949	8870106	E067	22716
chr9	8870147	8870207	E067	22914
chr9	8870379	8870521	E067	23146
chr9	8870524	8870625	E067	23291
chr9	8870648	8871153	E067	23415
chr9	8871165	8871566	E067	23932
chr9	8871591	8871671	E067	24358
chr9	8871970	8872098	E067	24737
chr9	8872115	8872362	E067	24882
chr9	8872430	8872497	E067	25197
chr9	8872787	8872965	E067	25554
chr9	8873062	8873137	E067	25829
chr9	8873740	8873854	E067	26507
chr9	8879121	8879172	E067	31888
chr9	8892092	8892290	E067	44859
chr9	8799053	8799113	E068	-48120
chr9	8799222	8799313	E068	-47920
chr9	8799315	8799538	E068	-47695
chr9	8799573	8799689	E068	-47544
chr9	8799808	8799949	E068	-47284
chr9	8800066	8800123	E068	-47110
chr9	8800153	8800977	E068	-46256
chr9	8809000	8809072	E068	-38161
chr9	8809902	8810020	E068	-37213
chr9	8810025	8810111	E068	-37122
chr9	8810319	8810369	E068	-36864
chr9	8810573	8810627	E068	-36606
chr9	8815579	8815680	E068	-31553
chr9	8815898	8816824	E068	-30409
chr9	8816878	8817041	E068	-30192
chr9	8817089	8817169	E068	-30064
chr9	8817188	8817285	E068	-29948
chr9	8817492	8817618	E068	-29615
chr9	8822700	8822915	E068	-24318
chr9	8822983	8823075	E068	-24158
chr9	8823094	8823144	E068	-24089
chr9	8823362	8823465	E068	-23768
chr9	8823500	8823572	E068	-23661
chr9	8824061	8824309	E068	-22924
chr9	8829246	8829296	E068	-17937
chr9	8829307	8829367	E068	-17866
chr9	8831011	8831157	E068	-16076
chr9	8831361	8831411	E068	-15822
chr9	8831539	8831593	E068	-15640
chr9	8831762	8831856	E068	-15377
chr9	8831978	8832044	E068	-15189
chr9	8832857	8832926	E068	-14307
chr9	8833051	8833260	E068	-13973
chr9	8834791	8835003	E068	-12230
chr9	8835108	8835556	E068	-11677
chr9	8842588	8842673	E068	-4560
chr9	8842716	8842787	E068	-4446
chr9	8842826	8843252	E068	-3981
chr9	8845044	8845124	E068	-2109
chr9	8845824	8846176	E068	-1057
chr9	8846581	8846704	E068	-529
chr9	8846892	8846957	E068	-276
chr9	8852087	8852176	E068	4854
chr9	8852415	8852579	E068	5182
chr9	8852709	8852749	E068	5476
chr9	8852780	8852830	E068	5547
chr9	8852877	8852996	E068	5644
chr9	8853216	8853351	E068	5983
chr9	8853428	8853647	E068	6195
chr9	8853671	8853924	E068	6438
chr9	8854154	8854216	E068	6921
chr9	8860178	8860477	E068	12945
chr9	8860579	8860680	E068	13346
chr9	8860850	8860926	E068	13617
chr9	8864009	8864567	E068	16776
chr9	8865670	8865801	E068	18437
chr9	8865867	8865998	E068	18634
chr9	8866498	8866716	E068	19265
chr9	8866893	8866966	E068	19660
chr9	8867067	8867147	E068	19834
chr9	8867226	8867288	E068	19993
chr9	8867299	8867478	E068	20066
chr9	8868057	8868107	E068	20824
chr9	8868545	8868630	E068	21312
chr9	8868699	8869010	E068	21466
chr9	8869233	8869287	E068	22000
chr9	8869350	8869427	E068	22117
chr9	8869503	8869632	E068	22270
chr9	8869671	8869939	E068	22438
chr9	8869949	8870106	E068	22716
chr9	8870147	8870207	E068	22914
chr9	8870379	8870521	E068	23146
chr9	8870524	8870625	E068	23291
chr9	8871591	8871671	E068	24358
chr9	8871970	8872098	E068	24737
chr9	8872115	8872362	E068	24882
chr9	8872430	8872497	E068	25197
chr9	8872787	8872965	E068	25554
chr9	8873740	8873854	E068	26507
chr9	8877798	8877874	E068	30565
chr9	8877958	8878008	E068	30725
chr9	8878199	8878299	E068	30966
chr9	8878362	8878430	E068	31129
chr9	8879783	8879823	E068	32550
chr9	8892092	8892290	E068	44859
chr9	8797574	8797641	E069	-49592
chr9	8797699	8797749	E069	-49484
chr9	8797958	8797998	E069	-49235
chr9	8798860	8798982	E069	-48251
chr9	8799053	8799113	E069	-48120
chr9	8799222	8799313	E069	-47920
chr9	8799315	8799538	E069	-47695
chr9	8799573	8799689	E069	-47544
chr9	8799808	8799949	E069	-47284
chr9	8808076	8808138	E069	-39095
chr9	8809902	8810020	E069	-37213
chr9	8810025	8810111	E069	-37122
chr9	8810319	8810369	E069	-36864
chr9	8810573	8810627	E069	-36606
chr9	8811211	8811261	E069	-35972
chr9	8811322	8811372	E069	-35861
chr9	8811666	8811741	E069	-35492
chr9	8814466	8814776	E069	-32457
chr9	8814966	8815016	E069	-32217
chr9	8815265	8815309	E069	-31924
chr9	8815353	8815476	E069	-31757
chr9	8815579	8815680	E069	-31553
chr9	8815898	8816824	E069	-30409
chr9	8816878	8817041	E069	-30192
chr9	8817089	8817169	E069	-30064
chr9	8817188	8817285	E069	-29948
chr9	8817492	8817618	E069	-29615
chr9	8817823	8817863	E069	-29370
chr9	8821134	8821212	E069	-26021
chr9	8821273	8821313	E069	-25920
chr9	8821360	8821604	E069	-25629
chr9	8821681	8821721	E069	-25512
chr9	8822700	8822915	E069	-24318
chr9	8822983	8823075	E069	-24158
chr9	8823094	8823144	E069	-24089
chr9	8825686	8826092	E069	-21141
chr9	8828441	8828491	E069	-18742
chr9	8828803	8829057	E069	-18176
chr9	8829134	8829192	E069	-18041
chr9	8829246	8829296	E069	-17937
chr9	8829307	8829367	E069	-17866
chr9	8831539	8831593	E069	-15640
chr9	8831762	8831856	E069	-15377
chr9	8831978	8832044	E069	-15189
chr9	8832857	8832926	E069	-14307
chr9	8833051	8833260	E069	-13973
chr9	8833268	8833375	E069	-13858
chr9	8835108	8835556	E069	-11677
chr9	8840887	8841003	E069	-6230
chr9	8841025	8841075	E069	-6158
chr9	8842588	8842673	E069	-4560
chr9	8842716	8842787	E069	-4446
chr9	8842826	8843252	E069	-3981
chr9	8843425	8843475	E069	-3758
chr9	8843767	8843817	E069	-3416
chr9	8845044	8845124	E069	-2109
chr9	8845348	8845434	E069	-1799
chr9	8845444	8845605	E069	-1628
chr9	8845617	8845771	E069	-1462
chr9	8845824	8846176	E069	-1057
chr9	8846581	8846704	E069	-529
chr9	8846892	8846957	E069	-276
chr9	8850151	8850201	E069	2918
chr9	8850797	8851201	E069	3564
chr9	8851436	8851576	E069	4203
chr9	8852087	8852176	E069	4854
chr9	8852415	8852579	E069	5182
chr9	8852709	8852749	E069	5476
chr9	8852780	8852830	E069	5547
chr9	8852877	8852996	E069	5644
chr9	8853216	8853351	E069	5983
chr9	8853428	8853647	E069	6195
chr9	8860178	8860477	E069	12945
chr9	8860579	8860680	E069	13346
chr9	8860850	8860926	E069	13617
chr9	8860929	8861393	E069	13696
chr9	8863124	8863382	E069	15891
chr9	8863563	8863613	E069	16330
chr9	8864009	8864567	E069	16776
chr9	8864596	8864780	E069	17363
chr9	8865670	8865801	E069	18437
chr9	8865867	8865998	E069	18634
chr9	8866498	8866716	E069	19265
chr9	8866893	8866966	E069	19660
chr9	8867067	8867147	E069	19834
chr9	8867226	8867288	E069	19993
chr9	8867299	8867478	E069	20066
chr9	8868057	8868107	E069	20824
chr9	8869233	8869287	E069	22000
chr9	8869350	8869427	E069	22117
chr9	8869503	8869632	E069	22270
chr9	8869671	8869939	E069	22438
chr9	8869949	8870106	E069	22716
chr9	8870147	8870207	E069	22914
chr9	8870379	8870521	E069	23146
chr9	8870524	8870625	E069	23291
chr9	8870648	8871153	E069	23415
chr9	8871165	8871566	E069	23932
chr9	8871591	8871671	E069	24358
chr9	8871970	8872098	E069	24737
chr9	8872115	8872362	E069	24882
chr9	8872430	8872497	E069	25197
chr9	8872787	8872965	E069	25554
chr9	8873062	8873137	E069	25829
chr9	8873740	8873854	E069	26507
chr9	8877798	8877874	E069	30565
chr9	8877958	8878008	E069	30725
chr9	8878199	8878299	E069	30966
chr9	8878362	8878430	E069	31129
chr9	8879121	8879172	E069	31888
chr9	8879406	8879494	E069	32173
chr9	8886644	8886911	E069	39411
chr9	8886997	8887047	E069	39764
chr9	8890848	8890968	E069	43615
chr9	8891168	8891218	E069	43935
chr9	8892092	8892290	E069	44859
chr9	8894945	8895017	E069	47712
chr9	8895072	8895603	E069	47839
chr9	8815898	8816824	E070	-30409
chr9	8816878	8817041	E070	-30192
chr9	8817089	8817169	E070	-30064
chr9	8817188	8817285	E070	-29948
chr9	8817492	8817618	E070	-29615
chr9	8842588	8842673	E070	-4560
chr9	8842716	8842787	E070	-4446
chr9	8842826	8843252	E070	-3981
chr9	8843425	8843475	E070	-3758
chr9	8845044	8845124	E070	-2109
chr9	8845348	8845434	E070	-1799
chr9	8845444	8845605	E070	-1628
chr9	8845617	8845771	E070	-1462
chr9	8845824	8846176	E070	-1057
chr9	8846581	8846704	E070	-529
chr9	8846892	8846957	E070	-276
chr9	8847073	8847140	E070	-93
chr9	8847437	8847588	E070	204
chr9	8847646	8847811	E070	413
chr9	8847844	8848164	E070	611
chr9	8850797	8851201	E070	3564
chr9	8851436	8851576	E070	4203
chr9	8852780	8852830	E070	5547
chr9	8852877	8852996	E070	5644
chr9	8853216	8853351	E070	5983
chr9	8853428	8853647	E070	6195
chr9	8853671	8853924	E070	6438
chr9	8854154	8854216	E070	6921
chr9	8859932	8860050	E070	12699
chr9	8860178	8860477	E070	12945
chr9	8860579	8860680	E070	13346
chr9	8867226	8867288	E070	19993
chr9	8867299	8867478	E070	20066
chr9	8870648	8871153	E070	23415
chr9	8797574	8797641	E071	-49592
chr9	8798860	8798982	E071	-48251
chr9	8799053	8799113	E071	-48120
chr9	8799222	8799313	E071	-47920
chr9	8799315	8799538	E071	-47695
chr9	8799573	8799689	E071	-47544
chr9	8799808	8799949	E071	-47284
chr9	8800066	8800123	E071	-47110
chr9	8800153	8800977	E071	-46256
chr9	8802371	8802574	E071	-44659
chr9	8802678	8802767	E071	-44466
chr9	8807031	8807135	E071	-40098
chr9	8808076	8808138	E071	-39095
chr9	8811211	8811261	E071	-35972
chr9	8811322	8811372	E071	-35861
chr9	8811666	8811741	E071	-35492
chr9	8811888	8812312	E071	-34921
chr9	8814466	8814776	E071	-32457
chr9	8814966	8815016	E071	-32217
chr9	8815265	8815309	E071	-31924
chr9	8815353	8815476	E071	-31757
chr9	8815579	8815680	E071	-31553
chr9	8815898	8816824	E071	-30409
chr9	8816878	8817041	E071	-30192
chr9	8817089	8817169	E071	-30064
chr9	8817188	8817285	E071	-29948
chr9	8817823	8817863	E071	-29370
chr9	8821134	8821212	E071	-26021
chr9	8821273	8821313	E071	-25920
chr9	8821360	8821604	E071	-25629
chr9	8823362	8823465	E071	-23768
chr9	8823500	8823572	E071	-23661
chr9	8824061	8824309	E071	-22924
chr9	8825000	8825050	E071	-22183
chr9	8825055	8825200	E071	-22033
chr9	8828441	8828491	E071	-18742
chr9	8829134	8829192	E071	-18041
chr9	8829246	8829296	E071	-17937
chr9	8829307	8829367	E071	-17866
chr9	8831361	8831411	E071	-15822
chr9	8831539	8831593	E071	-15640
chr9	8831762	8831856	E071	-15377
chr9	8831978	8832044	E071	-15189
chr9	8832857	8832926	E071	-14307
chr9	8833051	8833260	E071	-13973
chr9	8840519	8840569	E071	-6664
chr9	8840887	8841003	E071	-6230
chr9	8841025	8841075	E071	-6158
chr9	8841318	8841375	E071	-5858
chr9	8841414	8841518	E071	-5715
chr9	8842588	8842673	E071	-4560
chr9	8842716	8842787	E071	-4446
chr9	8842826	8843252	E071	-3981
chr9	8843425	8843475	E071	-3758
chr9	8843767	8843817	E071	-3416
chr9	8845044	8845124	E071	-2109
chr9	8845348	8845434	E071	-1799
chr9	8845444	8845605	E071	-1628
chr9	8845824	8846176	E071	-1057
chr9	8846581	8846704	E071	-529
chr9	8846892	8846957	E071	-276
chr9	8849686	8849763	E071	2453
chr9	8849782	8849941	E071	2549
chr9	8850797	8851201	E071	3564
chr9	8851436	8851576	E071	4203
chr9	8852087	8852176	E071	4854
chr9	8859932	8860050	E071	12699
chr9	8860178	8860477	E071	12945
chr9	8860579	8860680	E071	13346
chr9	8860850	8860926	E071	13617
chr9	8860929	8861393	E071	13696
chr9	8862499	8862549	E071	15266
chr9	8863124	8863382	E071	15891
chr9	8863563	8863613	E071	16330
chr9	8864009	8864567	E071	16776
chr9	8866498	8866716	E071	19265
chr9	8866893	8866966	E071	19660
chr9	8867067	8867147	E071	19834
chr9	8868057	8868107	E071	20824
chr9	8868545	8868630	E071	21312
chr9	8868699	8869010	E071	21466
chr9	8869233	8869287	E071	22000
chr9	8869350	8869427	E071	22117
chr9	8869503	8869632	E071	22270
chr9	8869671	8869939	E071	22438
chr9	8869949	8870106	E071	22716
chr9	8870147	8870207	E071	22914
chr9	8870379	8870521	E071	23146
chr9	8870524	8870625	E071	23291
chr9	8871165	8871566	E071	23932
chr9	8871591	8871671	E071	24358
chr9	8872430	8872497	E071	25197
chr9	8872787	8872965	E071	25554
chr9	8873062	8873137	E071	25829
chr9	8875686	8875740	E071	28453
chr9	8875811	8875917	E071	28578
chr9	8875941	8876039	E071	28708
chr9	8876392	8876604	E071	29159
chr9	8876972	8877022	E071	29739
chr9	8877251	8877301	E071	30018
chr9	8877505	8877549	E071	30272
chr9	8877798	8877874	E071	30565
chr9	8877958	8878008	E071	30725
chr9	8878199	8878299	E071	30966
chr9	8878362	8878430	E071	31129
chr9	8879121	8879172	E071	31888
chr9	8879406	8879494	E071	32173
chr9	8879724	8879774	E071	32491
chr9	8879783	8879823	E071	32550
chr9	8880201	8880283	E071	32968
chr9	8880354	8880490	E071	33121
chr9	8886644	8886911	E071	39411
chr9	8886997	8887047	E071	39764
chr9	8887406	8887665	E071	40173
chr9	8887814	8887873	E071	40581
chr9	8887951	8887991	E071	40718
chr9	8888062	8888158	E071	40829
chr9	8892092	8892290	E071	44859
chr9	8893970	8894054	E071	46737
chr9	8894945	8895017	E071	47712
chr9	8895072	8895603	E071	47839
chr9	8797574	8797641	E072	-49592
chr9	8797699	8797749	E072	-49484
chr9	8799053	8799113	E072	-48120
chr9	8799222	8799313	E072	-47920
chr9	8808076	8808138	E072	-39095
chr9	8809000	8809072	E072	-38161
chr9	8809902	8810020	E072	-37213
chr9	8810025	8810111	E072	-37122
chr9	8810319	8810369	E072	-36864
chr9	8810573	8810627	E072	-36606
chr9	8814466	8814776	E072	-32457
chr9	8814966	8815016	E072	-32217
chr9	8815265	8815309	E072	-31924
chr9	8815353	8815476	E072	-31757
chr9	8815579	8815680	E072	-31553
chr9	8815898	8816824	E072	-30409
chr9	8816878	8817041	E072	-30192
chr9	8817089	8817169	E072	-30064
chr9	8817188	8817285	E072	-29948
chr9	8821681	8821721	E072	-25512
chr9	8821977	8822155	E072	-25078
chr9	8822406	8822513	E072	-24720
chr9	8822700	8822915	E072	-24318
chr9	8822983	8823075	E072	-24158
chr9	8823094	8823144	E072	-24089
chr9	8824061	8824309	E072	-22924
chr9	8825000	8825050	E072	-22183
chr9	8825055	8825200	E072	-22033
chr9	8825576	8825667	E072	-21566
chr9	8825686	8826092	E072	-21141
chr9	8826397	8826502	E072	-20731
chr9	8828271	8828409	E072	-18824
chr9	8831011	8831157	E072	-16076
chr9	8831361	8831411	E072	-15822
chr9	8831539	8831593	E072	-15640
chr9	8831762	8831856	E072	-15377
chr9	8831978	8832044	E072	-15189
chr9	8832857	8832926	E072	-14307
chr9	8833051	8833260	E072	-13973
chr9	8833268	8833375	E072	-13858
chr9	8834791	8835003	E072	-12230
chr9	8835108	8835556	E072	-11677
chr9	8836240	8836515	E072	-10718
chr9	8840519	8840569	E072	-6664
chr9	8840887	8841003	E072	-6230
chr9	8841025	8841075	E072	-6158
chr9	8841318	8841375	E072	-5858
chr9	8842826	8843252	E072	-3981
chr9	8843425	8843475	E072	-3758
chr9	8843767	8843817	E072	-3416
chr9	8845044	8845124	E072	-2109
chr9	8845348	8845434	E072	-1799
chr9	8845444	8845605	E072	-1628
chr9	8845824	8846176	E072	-1057
chr9	8846581	8846704	E072	-529
chr9	8846892	8846957	E072	-276
chr9	8847073	8847140	E072	-93
chr9	8847437	8847588	E072	204
chr9	8847646	8847811	E072	413
chr9	8847844	8848164	E072	611
chr9	8851436	8851576	E072	4203
chr9	8852087	8852176	E072	4854
chr9	8852415	8852579	E072	5182
chr9	8852709	8852749	E072	5476
chr9	8852780	8852830	E072	5547
chr9	8860579	8860680	E072	13346
chr9	8860850	8860926	E072	13617
chr9	8863124	8863382	E072	15891
chr9	8863563	8863613	E072	16330
chr9	8864009	8864567	E072	16776
chr9	8867226	8867288	E072	19993
chr9	8867299	8867478	E072	20066
chr9	8869671	8869939	E072	22438
chr9	8869949	8870106	E072	22716
chr9	8870147	8870207	E072	22914
chr9	8870379	8870521	E072	23146
chr9	8870524	8870625	E072	23291
chr9	8870648	8871153	E072	23415
chr9	8871165	8871566	E072	23932
chr9	8871591	8871671	E072	24358
chr9	8871970	8872098	E072	24737
chr9	8872115	8872362	E072	24882
chr9	8872430	8872497	E072	25197
chr9	8873062	8873137	E072	25829
chr9	8875811	8875917	E072	28578
chr9	8875941	8876039	E072	28708
chr9	8895072	8895603	E072	47839
chr9	8798860	8798982	E073	-48251
chr9	8799053	8799113	E073	-48120
chr9	8809000	8809072	E073	-38161
chr9	8815898	8816824	E073	-30409
chr9	8816878	8817041	E073	-30192
chr9	8817089	8817169	E073	-30064
chr9	8817188	8817285	E073	-29948
chr9	8822983	8823075	E073	-24158
chr9	8823094	8823144	E073	-24089
chr9	8823362	8823465	E073	-23768
chr9	8823500	8823572	E073	-23661
chr9	8825686	8826092	E073	-21141
chr9	8826397	8826502	E073	-20731
chr9	8842826	8843252	E073	-3981
chr9	8846581	8846704	E073	-529
chr9	8846892	8846957	E073	-276
chr9	8859932	8860050	E073	12699
chr9	8865670	8865801	E073	18437
chr9	8870648	8871153	E073	23415
chr9	8871165	8871566	E073	23932
chr9	8871591	8871671	E073	24358
chr9	8871970	8872098	E073	24737
chr9	8872115	8872362	E073	24882
chr9	8872430	8872497	E073	25197
chr9	8872787	8872965	E073	25554
chr9	8873062	8873137	E073	25829
chr9	8873740	8873854	E073	26507
chr9	8797699	8797749	E074	-49484
chr9	8798860	8798982	E074	-48251
chr9	8799053	8799113	E074	-48120
chr9	8799222	8799313	E074	-47920
chr9	8799315	8799538	E074	-47695
chr9	8799573	8799689	E074	-47544
chr9	8807031	8807135	E074	-40098
chr9	8809000	8809072	E074	-38161
chr9	8809902	8810020	E074	-37213
chr9	8810025	8810111	E074	-37122
chr9	8810319	8810369	E074	-36864
chr9	8810573	8810627	E074	-36606
chr9	8812551	8812719	E074	-34514
chr9	8812839	8812907	E074	-34326
chr9	8813153	8813247	E074	-33986
chr9	8813260	8813310	E074	-33923
chr9	8813423	8813474	E074	-33759
chr9	8813530	8813570	E074	-33663
chr9	8813927	8813977	E074	-33256
chr9	8813979	8814019	E074	-33214
chr9	8815265	8815309	E074	-31924
chr9	8815353	8815476	E074	-31757
chr9	8815579	8815680	E074	-31553
chr9	8815898	8816824	E074	-30409
chr9	8816878	8817041	E074	-30192
chr9	8817089	8817169	E074	-30064
chr9	8817188	8817285	E074	-29948
chr9	8821134	8821212	E074	-26021
chr9	8821273	8821313	E074	-25920
chr9	8821360	8821604	E074	-25629
chr9	8821681	8821721	E074	-25512
chr9	8821977	8822155	E074	-25078
chr9	8822406	8822513	E074	-24720
chr9	8822700	8822915	E074	-24318
chr9	8822983	8823075	E074	-24158
chr9	8823094	8823144	E074	-24089
chr9	8823362	8823465	E074	-23768
chr9	8823500	8823572	E074	-23661
chr9	8826397	8826502	E074	-20731
chr9	8829246	8829296	E074	-17937
chr9	8829307	8829367	E074	-17866
chr9	8831011	8831157	E074	-16076
chr9	8831361	8831411	E074	-15822
chr9	8831539	8831593	E074	-15640
chr9	8831762	8831856	E074	-15377
chr9	8831978	8832044	E074	-15189
chr9	8832857	8832926	E074	-14307
chr9	8833051	8833260	E074	-13973
chr9	8833268	8833375	E074	-13858
chr9	8834791	8835003	E074	-12230
chr9	8835108	8835556	E074	-11677
chr9	8840887	8841003	E074	-6230
chr9	8841025	8841075	E074	-6158
chr9	8841318	8841375	E074	-5858
chr9	8841414	8841518	E074	-5715
chr9	8842588	8842673	E074	-4560
chr9	8842716	8842787	E074	-4446
chr9	8842826	8843252	E074	-3981
chr9	8843425	8843475	E074	-3758
chr9	8843767	8843817	E074	-3416
chr9	8845044	8845124	E074	-2109
chr9	8845348	8845434	E074	-1799
chr9	8845444	8845605	E074	-1628
chr9	8845824	8846176	E074	-1057
chr9	8846581	8846704	E074	-529
chr9	8846892	8846957	E074	-276
chr9	8847073	8847140	E074	-93
chr9	8847437	8847588	E074	204
chr9	8847646	8847811	E074	413
chr9	8847844	8848164	E074	611
chr9	8850151	8850201	E074	2918
chr9	8850797	8851201	E074	3564
chr9	8851436	8851576	E074	4203
chr9	8852087	8852176	E074	4854
chr9	8852709	8852749	E074	5476
chr9	8852780	8852830	E074	5547
chr9	8852877	8852996	E074	5644
chr9	8853216	8853351	E074	5983
chr9	8853428	8853647	E074	6195
chr9	8853671	8853924	E074	6438
chr9	8859932	8860050	E074	12699
chr9	8860178	8860477	E074	12945
chr9	8860579	8860680	E074	13346
chr9	8860850	8860926	E074	13617
chr9	8862499	8862549	E074	15266
chr9	8862617	8862674	E074	15384
chr9	8862712	8862772	E074	15479
chr9	8863124	8863382	E074	15891
chr9	8863563	8863613	E074	16330
chr9	8865670	8865801	E074	18437
chr9	8866498	8866716	E074	19265
chr9	8866893	8866966	E074	19660
chr9	8867067	8867147	E074	19834
chr9	8867226	8867288	E074	19993
chr9	8867299	8867478	E074	20066
chr9	8868057	8868107	E074	20824
chr9	8868545	8868630	E074	21312
chr9	8868699	8869010	E074	21466
chr9	8869233	8869287	E074	22000
chr9	8869350	8869427	E074	22117
chr9	8869503	8869632	E074	22270
chr9	8869671	8869939	E074	22438
chr9	8869949	8870106	E074	22716
chr9	8870147	8870207	E074	22914
chr9	8870379	8870521	E074	23146
chr9	8870524	8870625	E074	23291
chr9	8871591	8871671	E074	24358
chr9	8871970	8872098	E074	24737
chr9	8872115	8872362	E074	24882
chr9	8872430	8872497	E074	25197
chr9	8872787	8872965	E074	25554
chr9	8873062	8873137	E074	25829
chr9	8874405	8874464	E074	27172
chr9	8874691	8874865	E074	27458
chr9	8875686	8875740	E074	28453
chr9	8875811	8875917	E074	28578
chr9	8875941	8876039	E074	28708
chr9	8876392	8876604	E074	29159
chr9	8877798	8877874	E074	30565
chr9	8877958	8878008	E074	30725
chr9	8878199	8878299	E074	30966
chr9	8878362	8878430	E074	31129
chr9	8879121	8879172	E074	31888
chr9	8879406	8879494	E074	32173
chr9	8879724	8879774	E074	32491
chr9	8879783	8879823	E074	32550
chr9	8892092	8892290	E074	44859
chr9	8894945	8895017	E074	47712
chr9	8895072	8895603	E074	47839
chr9	8815353	8815476	E081	-31757
chr9	8815579	8815680	E081	-31553
chr9	8815898	8816824	E081	-30409
chr9	8829246	8829296	E081	-17937
chr9	8829307	8829367	E081	-17866
chr9	8843425	8843475	E081	-3758
chr9	8845044	8845124	E081	-2109
chr9	8845348	8845434	E081	-1799
chr9	8845444	8845605	E081	-1628
chr9	8845617	8845771	E081	-1462
chr9	8845824	8846176	E081	-1057
chr9	8846581	8846704	E081	-529
chr9	8846892	8846957	E081	-276
chr9	8847073	8847140	E081	-93
chr9	8847646	8847811	E081	413
chr9	8847844	8848164	E081	611
chr9	8850797	8851201	E081	3564
chr9	8851436	8851576	E081	4203
chr9	8852087	8852176	E081	4854
chr9	8852877	8852996	E081	5644
chr9	8853216	8853351	E081	5983
chr9	8859932	8860050	E081	12699
chr9	8860178	8860477	E081	12945
chr9	8860579	8860680	E081	13346
chr9	8860850	8860926	E081	13617
chr9	8815353	8815476	E082	-31757
chr9	8815579	8815680	E082	-31553
chr9	8815898	8816824	E082	-30409
chr9	8816878	8817041	E082	-30192
chr9	8817089	8817169	E082	-30064
chr9	8817188	8817285	E082	-29948
chr9	8822700	8822915	E082	-24318
chr9	8822983	8823075	E082	-24158
chr9	8823094	8823144	E082	-24089
chr9	8823362	8823465	E082	-23768
chr9	8845044	8845124	E082	-2109
chr9	8845348	8845434	E082	-1799
chr9	8845444	8845605	E082	-1628
chr9	8845617	8845771	E082	-1462
chr9	8845824	8846176	E082	-1057
chr9	8846581	8846704	E082	-529
chr9	8846892	8846957	E082	-276
chr9	8850797	8851201	E082	3564
chr9	8859932	8860050	E082	12699
chr9	8860178	8860477	E082	12945
chr9	8860579	8860680	E082	13346
chr9	8860850	8860926	E082	13617

Promoter Annotation (GRCh37.p13)

Chromosome	Start	End	Region	Distance(-/+:Up/Downstream)
chr9	8854546	8854984	E067	7313
chr9	8855058	8855334	E067	7825
chr9	8855335	8855453	E067	8102
chr9	8855484	8855602	E067	8251
chr9	8855741	8856158	E067	8508
chr9	8856183	8859723	E067	8950
chr9	8854231	8854281	E068	6998
chr9	8854546	8854984	E068	7313
chr9	8855058	8855334	E068	7825
chr9	8855335	8855453	E068	8102
chr9	8855484	8855602	E068	8251
chr9	8855741	8856158	E068	8508
chr9	8856183	8859723	E068	8950
chr9	8895604	8896180	E068	48371
chr9	8854231	8854281	E069	6998
chr9	8854546	8854984	E069	7313
chr9	8855058	8855334	E069	7825
chr9	8855335	8855453	E069	8102
chr9	8855484	8855602	E069	8251
chr9	8855741	8856158	E069	8508
chr9	8856183	8859723	E069	8950
chr9	8854231	8854281	E070	6998
chr9	8854546	8854984	E070	7313
chr9	8855058	8855334	E070	7825
chr9	8855335	8855453	E070	8102
chr9	8855484	8855602	E070	8251
chr9	8855741	8856158	E070	8508
chr9	8856183	8859723	E070	8950
chr9	8854546	8854984	E071	7313
chr9	8855058	8855334	E071	7825
chr9	8855335	8855453	E071	8102
chr9	8855484	8855602	E071	8251
chr9	8855741	8856158	E071	8508
chr9	8856183	8859723	E071	8950
chr9	8895604	8896180	E071	48371
chr9	8854231	8854281	E072	6998
chr9	8854546	8854984	E072	7313
chr9	8855058	8855334	E072	7825
chr9	8855335	8855453	E072	8102
chr9	8855484	8855602	E072	8251
chr9	8855741	8856158	E072	8508
chr9	8856183	8859723	E072	8950
chr9	8895604	8896180	E072	48371
chr9	8854546	8854984	E073	7313
chr9	8855058	8855334	E073	7825
chr9	8855335	8855453	E073	8102
chr9	8855484	8855602	E073	8251
chr9	8855741	8856158	E073	8508
chr9	8856183	8859723	E073	8950
chr9	8854231	8854281	E074	6998
chr9	8854546	8854984	E074	7313
chr9	8855058	8855334	E074	7825
chr9	8855335	8855453	E074	8102
chr9	8855484	8855602	E074	8251
chr9	8855741	8856158	E074	8508
chr9	8856183	8859723	E074	8950
chr9	8854546	8854984	E081	7313
chr9	8855058	8855334	E081	7825
chr9	8855335	8855453	E081	8102
chr9	8855484	8855602	E081	8251
chr9	8855741	8856158	E081	8508
chr9	8856183	8859723	E081	8950
chr9	8854231	8854281	E082	6998
chr9	8854546	8854984	E082	7313
chr9	8855058	8855334	E082	7825
chr9	8855335	8855453	E082	8102
chr9	8855484	8855602	E082	8251
chr9	8855741	8856158	E082	8508
chr9	8856183	8859723	E082	8950