SNP Detail Info-rs2345546

Organism: Homo sapiens

Alleles: C>T

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

T=0106 (3087/29118,TOPMED)
T=0106 (530/5008,1000G)

Position: chr16:25416151 (GRCh38.p7) (16p12.1)

Phenotype: AD

Dataset:

GWASCatalog

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 2 Enhancers around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 16	NC_000016.10:g.25416151C>T
GRCh37.p13 chr 16	NC_000016.9:g.25427472C>T

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	C=0.937	T=0.063
1000Genomes	American	Sub	694	C=0.870	T=0.130
1000Genomes	East Asian	Sub	1008	C=0.867	T=0.133
1000Genomes	Europe	Sub	1006	C=0.859	T=0.141
1000Genomes	Global	Study-wide	5008	C=0.894	T=0.106
1000Genomes	South Asian	Sub	978	C=0.920	T=0.080
Trans-Omics for Precision Medicine	Global	Study-wide	29118	C=0.894	T=0.106

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr16	25431111	25431201	E082	3639
chr16	25431243	25431338	E082	3771

rs2345546