rs2418867

Homo sapiens
C>T
None
Check p-value
SNV (Single Nucleotide Variation)
C==0317 (9486/29890,GnomAD)
C==0329 (9586/29116,TOPMED)
C==0372 (1863/5008,1000G)
C==0361 (1393/3854,ALSPAC)
C==0355 (1318/3708,TWINSUK)
chr2:59545467 (GRCh38.p7) (2p16.1)
AD
GWASdb2
1   publication(s)
See rs on genome
25 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 2NC_000002.12:g.59545467C>T
GRCh37.p13 chr 2NC_000002.11:g.59772602C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.286T=0.714
1000GenomesAmericanSub694C=0.390T=0.610
1000GenomesEast AsianSub1008C=0.525T=0.475
1000GenomesEuropeSub1006C=0.356T=0.644
1000GenomesGlobalStudy-wide5008C=0.372T=0.628
1000GenomesSouth AsianSub978C=0.340T=0.660
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.361T=0.639
The Genome Aggregation DatabaseAfricanSub8698C=0.285T=0.715
The Genome Aggregation DatabaseAmericanSub838C=0.390T=0.610
The Genome Aggregation DatabaseEast AsianSub1600C=0.527T=0.473
The Genome Aggregation DatabaseEuropeSub18452C=0.310T=0.689
The Genome Aggregation DatabaseGlobalStudy-wide29890C=0.317T=0.682
The Genome Aggregation DatabaseOtherSub302C=0.370T=0.630
Trans-Omics for Precision MedicineGlobalStudy-wide29116C=0.329T=0.670
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.355T=0.645
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs24188674.59E-05alcohol consumption23743675

eQTL of rs2418867 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs2418867 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr25981223659812346E07039634
chr25981267359813110E07040071
chr25981330659813694E07040704
chr25981267359813110E07140071
chr25981267359813110E07240071
chr25981267359813110E07440071
chr25979357059793733E08120968
chr25979377559794244E08121173
chr25979429459794429E08121692
chr25979448259795096E08121880
chr25979531859795414E08122716
chr25979556659795892E08122964
chr25979831859798751E08125716
chr25979946259799668E08126860
chr25981267359813110E08140071
chr25979357059793733E08220968
chr25979377559794244E08221173
chr25979429459794429E08221692
chr25979448259795096E08221880
chr25979531859795414E08222716
chr25981223659812346E08239634
chr25981267359813110E08240071
chr25981330659813694E08240704
chr25981540359815727E08242801
chr25981573359815897E08243131